FFCP PHASE1:Hg19::chr2:77749342..77749350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80059 | |EntrezGene=80059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19411 | |HGNC=19411 | ||
|TSSclassifier=strong | |||
|UniProt=Q4KMX1 | |UniProt=Q4KMX1 | ||
|association_with_transcript=-6bp_to_ENST00000409282_5end | |association_with_transcript=-6bp_to_ENST00000409282_5end | ||
|cluster_id=chr2:77749342..77749350,- | |||
|coexpression_cluster_id=C156 | |coexpression_cluster_id=C156 | ||
|description=CAGE_peak_7_at_LRRTM4_5end | |description=CAGE_peak_7_at_LRRTM4_5end | ||
|id=chr2:77749342..77749350,- | |id=chr2:77749342..77749350,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000946;6.62e-41;1!CL:0000786;6.62e-41;1!CL:0000047;5.15e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,6.62e-41,1;CL:0000786,6.62e-41,1;CL:0000980,6.62e-41,1;CL:0000785,3.11e-21,2;CL:0000955,3.11e-21,2;CL:0000818,3.11e-21,2;CL:0000954,3.11e-21,2;CL:0000816,3.11e-21,2;CL:0000817,1.22e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.11e-21;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p7@LRRTM4 | |short_description=p7@LRRTM4 | ||
}} | }} |
Latest revision as of 13:19, 18 September 2015
Short description: | p7@LRRTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRRTM4_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | -6bp_to_ENST00000409282_5end |
EntrezGene: | LRRTM4 |
HGNC: | 19411 |
UniProt: | Q4KMX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 6.62e-41 | 1 |
plasma cell | 6.62e-41 | 1 |
plasmablast | 6.62e-41 | 1 |
mature B cell | 3.11e-21 | 2 |
pre-B-II cell | 3.11e-21 | 2 |
transitional stage B cell | 3.11e-21 | 2 |
small pre-B-II cell | 3.11e-21 | 2 |
immature B cell | 3.11e-21 | 2 |
precursor B cell | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.74e-09 | 5 |
parietal lobe | 3.22e-09 | 5 |
neocortex | 1.42e-08 | 20 |
regional part of cerebral cortex | 6.52e-08 | 22 |
cerebral cortex | 4.15e-07 | 25 |
pallium | 4.15e-07 | 25 |