FFCP PHASE1:Hg19::chr19:4472210..4472225,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4472210..4472225,+ to FFCP PHASE1:Hg19::chr19:4472210..4472225,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84717 | |EntrezGene=84717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4V5,E9PGW4 | |UniProt=Q7Z4V5,E9PGW4 | ||
|association_with_transcript=-29bp_to_ENST00000301284,ENST00000398364,NM_001001520,NM_032631,uc002mao.2,uc002map.2_5end | |||
|cluster_id=chr19:4472210..4472225,+ | |||
|description=CAGE_peak_3_at_HDGFRP2_5end | |||
|id=chr19:4472210..4472225,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.65e-09!180;CL:0000393!9.36e-09!60;CL:0000211!9.36e-09!60;CL:0000183!2.72e-08!59;CL:0000187!4.59e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.50e-08,61;CL:0000211,4.50e-08,61;CL:0000192,6.39e-07,43;CL:0000514,6.39e-07,43;CL:0000187,8.33e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.74e-11!309;UBERON:0000119!3.32e-11!312;UBERON:0000475!1.69e-07!365;UBERON:0000025!2.66e-07!194;UBERON:0001637!3.14e-07!42;UBERON:0003509!3.14e-07!42;UBERON:0004572!3.14e-07!42;UBERON:0001981!5.36e-07!60;UBERON:0007500!5.36e-07!60;UBERON:0004537!5.36e-07!60;UBERON:0006965!5.36e-07!60;UBERON:0000486!9.60e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.14e-08,78;UBERON:0001637,6.78e-07,42;UBERON:0003509,6.78e-07,42;UBERON:0004572,6.78e-07,42;UBERON:0003914,7.88e-07,117;UBERON:0000483,8.57e-07,306;UBERON:0006555,8.76e-07,16;UBERON:0004819,8.76e-07,16 | |||
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| ||
|short_description=p3@HDGFRP2 | |||
}} | }} |
Latest revision as of 13:14, 18 September 2015
Short description: | p3@HDGFRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HDGFRP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000301284, ENST00000398364, NM_001001520, NM_032631, uc002mao.2, uc002map.2_5end |
EntrezGene: | HDGFRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.50e-08 | 61 |
electrically active cell | 4.50e-08 | 61 |
smooth muscle cell | 6.39e-07 | 43 |
smooth muscle myoblast | 6.39e-07 | 43 |
muscle cell | 8.33e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.14e-08 | 78 |
artery | 6.78e-07 | 42 |
arterial blood vessel | 6.78e-07 | 42 |
arterial system | 6.78e-07 | 42 |
epithelial tube | 7.88e-07 | 117 |
epithelium | 8.57e-07 | 306 |
excretory tube | 8.76e-07 | 16 |
kidney epithelium | 8.76e-07 | 16 |