FFCP PHASE1:Hg19::chr11:59950609..59950620,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:59950609..59950620,-
|short_description=p4@MS4A6A
|description=CAGE_peak_4_at_MS4A6A_5end
|association_with_transcript=0bp_to_ENST00000526677_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64231 | |EntrezGene=64231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13375 | |HGNC=13375 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526677_5end | |||
|cluster_id=chr11:59950609..59950620,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_MS4A6A_5end | |||
|id=chr11:59950609..59950620,- | |||
|ontology_enrichment_celltype=CL:0002194!1.18e-47!63;CL:0000576!1.18e-47!63;CL:0000040!1.18e-47!63;CL:0000559!1.18e-47!63;CL:0002009!3.51e-47!65;CL:0000766!2.07e-45!76;CL:0000557!1.76e-44!71;CL:0000839!7.14e-44!70;CL:0000763!4.50e-37!112;CL:0000049!4.50e-37!112;CL:0002057!8.66e-37!42;CL:0000860!2.68e-33!45;CL:0000037!1.43e-26!172;CL:0000566!1.43e-26!172;CL:0000738!1.67e-26!140;CL:0002087!2.45e-25!119;CL:0000988!1.36e-23!182;CL:0002032!7.80e-23!165;CL:0000837!7.80e-23!165;CL:0002031!8.93e-23!124 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.55e-35;48!CL:0000473;1.42e-33;39!CL:0000234;1.42e-33;39!CL:0000860;3.78e-32;33!CL:0002057;3.78e-32;33!CL:0000766;7.41e-24;69!CL:0000763;2.07e-17;100!CL:0002393;4.96e-12;6!CL:0002397;4.96e-12;6!CL:0000235;9.23e-10;6!CL:0002087;1.00e-08;104!CL:0000738;4.43e-08;136!CL:0002619;5.25e-08;3!CL:0000784;4.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.22e-62,59;CL:0000576,6.22e-62,59;CL:0000040,6.22e-62,59;CL:0000559,6.22e-62,59;CL:0002009,1.85e-59,61;CL:0000766,2.74e-55,72;CL:0000839,6.35e-54,66;CL:0000557,6.48e-53,67;CL:0000473,2.30e-51,48;CL:0000234,2.30e-51,48;CL:0000763,2.01e-44,108;CL:0000049,2.01e-44,108;CL:0000860,5.70e-43,42;CL:0002057,5.70e-43,42;CL:0002087,1.92e-29,115;CL:0000738,3.96e-29,136;CL:0000037,6.59e-29,168;CL:0000988,1.44e-26,177;CL:0002032,1.67e-24,161;CL:0000837,1.67e-24,161;CL:0002031,1.52e-23,120;CL:0000235,9.24e-10,6;CL:0002619,5.29e-08,3;CL:0002393,8.21e-08,9;CL:0002397,8.21e-08,9;CL:0000784,2.86e-07,3;CL:0000134,7.06e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-31;42!CL:0000049;1.48e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.25e-44!102;UBERON:0003061!5.25e-44!102;UBERON:0002193!1.28e-40!112;UBERON:0007023!2.93e-40!115;UBERON:0002371!1.92e-38!80;UBERON:0001474!3.02e-34!86;UBERON:0002405!8.22e-32!115;UBERON:0004765!5.04e-26!101;UBERON:0001434!5.04e-26!101;UBERON:0003081!2.97e-15!216;UBERON:0002204!1.03e-11!167;UBERON:0000062!3.99e-09!511;UBERON:0001049!6.61e-09!57;UBERON:0005068!6.61e-09!57;UBERON:0006241!6.61e-09!57;UBERON:0007135!6.61e-09!57;UBERON:0000479!1.76e-07!787;UBERON:0002616!9.04e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.47e-09;15!UBERON:0000179;4.47e-09;15!UBERON:0000463;4.47e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.71e-55,98;UBERON:0003061,5.71e-55,98;UBERON:0002193,1.70e-50,108;UBERON:0002371,5.00e-45,76;UBERON:0002405,9.28e-42,93;UBERON:0001474,9.94e-41,82;UBERON:0004765,6.84e-36,90;UBERON:0001434,6.13e-31,100;UBERON:0003081,8.24e-24,203;UBERON:0002204,8.20e-16,167;UBERON:0000926,7.47e-12,315;UBERON:0004120,7.47e-12,315;UBERON:0006603,7.47e-12,315;UBERON:0007023,4.77e-09,114;UBERON:0000178,4.83e-09,15;UBERON:0000179,4.83e-09,15;UBERON:0000463,4.83e-09,15 | |||
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| ||
|short_description=p4@MS4A6A | |||
}} | }} |
Latest revision as of 13:09, 18 September 2015
Short description: | p4@MS4A6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MS4A6A_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000526677_5end |
EntrezGene: | MS4A6A |
HGNC: | 13375 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.22e-62 | 59 |
monocyte | 6.22e-62 | 59 |
monoblast | 6.22e-62 | 59 |
promonocyte | 6.22e-62 | 59 |
macrophage dendritic cell progenitor | 1.85e-59 | 61 |
myeloid leukocyte | 2.74e-55 | 72 |
myeloid lineage restricted progenitor cell | 6.35e-54 | 66 |
granulocyte monocyte progenitor cell | 6.48e-53 | 67 |
defensive cell | 2.30e-51 | 48 |
phagocyte | 2.30e-51 | 48 |
myeloid cell | 2.01e-44 | 108 |
common myeloid progenitor | 2.01e-44 | 108 |
classical monocyte | 5.70e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.70e-43 | 42 |
nongranular leukocyte | 1.92e-29 | 115 |
leukocyte | 3.96e-29 | 136 |
hematopoietic stem cell | 6.59e-29 | 168 |
hematopoietic cell | 1.44e-26 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 1.52e-23 | 120 |
macrophage | 9.24e-10 | 6 |
adult endothelial progenitor cell | 5.29e-08 | 3 |
intermediate monocyte | 8.21e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.21e-08 | 9 |
plasmacytoid dendritic cell | 2.86e-07 | 3 |
mesenchymal cell | 7.06e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.71e-55 | 98 |
blood island | 5.71e-55 | 98 |
hemolymphoid system | 1.70e-50 | 108 |
bone marrow | 5.00e-45 | 76 |
immune system | 9.28e-42 | 93 |
bone element | 9.94e-41 | 82 |
skeletal element | 6.84e-36 | 90 |
skeletal system | 6.13e-31 | 100 |
lateral plate mesoderm | 8.24e-24 | 203 |
musculoskeletal system | 8.20e-16 | 167 |
mesoderm | 7.47e-12 | 315 |
mesoderm-derived structure | 7.47e-12 | 315 |
presumptive mesoderm | 7.47e-12 | 315 |
adult organism | 4.77e-09 | 114 |
blood | 4.83e-09 | 15 |
haemolymphatic fluid | 4.83e-09 | 15 |
organism substance | 4.83e-09 | 15 |