FFCP PHASE1:Hg19::chr15:64388147..64388158,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:64388147..64388158,+
|short_description=p2@SNX1
|description=CAGE_peak_2_at_SNX1_5end
|association_with_transcript=-18bp_to_ENST00000353874,uc002amv.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6642 | |EntrezGene=6642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11172 | |HGNC=11172 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKH4 | |UniProt=A6NKH4 | ||
|association_with_transcript=-18bp_to_ENST00000353874,uc002amv.2,uc002amw.2,uc002amx.2,uc002amy.2,uc010bgv.2,uc010bgw.2,uc010uio.1_5end | |||
|cluster_id=chr15:64388147..64388158,+ | |||
|description=CAGE_peak_2_at_SNX1_5end | |||
|id=chr15:64388147..64388158,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.65e-08!63;CL:0000576!3.65e-08!63;CL:0000040!3.65e-08!63;CL:0000559!3.65e-08!63;CL:0002009!1.06e-07!65;CL:0000839!9.61e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.38e-08;39!CL:0000234;8.38e-08;39!CL:0000235;8.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.16e-10,59;CL:0000576,2.16e-10,59;CL:0000040,2.16e-10,59;CL:0000559,2.16e-10,59;CL:0002009,1.04e-09,61;CL:0000766,4.52e-09,72;CL:0000473,1.43e-08,48;CL:0000234,1.43e-08,48;CL:0000839,3.25e-08,66;CL:0000557,6.02e-08,67;CL:0000235,1.03e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-14!115;UBERON:0000467!5.84e-13!625;UBERON:0000480!8.00e-13!626;UBERON:0000468!1.13e-12!659;UBERON:0000923!3.19e-12!604;UBERON:0005291!3.19e-12!604;UBERON:0006598!3.19e-12!604;UBERON:0002532!3.19e-12!604;UBERON:0002050!3.25e-12!605;UBERON:0005423!3.25e-12!605;UBERON:0001049!3.30e-12!57;UBERON:0005068!3.30e-12!57;UBERON:0006241!3.30e-12!57;UBERON:0007135!3.30e-12!57;UBERON:0000922!5.69e-12!612;UBERON:0002616!7.65e-12!59;UBERON:0003080!3.00e-11!42;UBERON:0001017!4.58e-11!82;UBERON:0002780!9.99e-11!41;UBERON:0001890!9.99e-11!41;UBERON:0006240!9.99e-11!41;UBERON:0000062!1.52e-10!511;UBERON:0000955!5.45e-10!69;UBERON:0006238!5.45e-10!69;UBERON:0005743!6.29e-10!86;UBERON:0000479!1.72e-09!787;UBERON:0002020!7.90e-09!34;UBERON:0003528!7.90e-09!34;UBERON:0001893!8.65e-09!34;UBERON:0000073!1.67e-08!94;UBERON:0001016!1.67e-08!94;UBERON:0002791!2.56e-08!33;UBERON:0001869!9.00e-08!32;UBERON:0000477!1.25e-07!286;UBERON:0000475!2.05e-07!365;UBERON:0003056!5.92e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.65e-09;41!UBERON:0001890;6.65e-09;41!UBERON:0003528;2.10e-08;34!UBERON:0002020;2.10e-08;34!UBERON:0001893;2.22e-08;34!UBERON:0002619;5.53e-08;22!UBERON:0000073;6.19e-08;53!UBERON:0002616;6.19e-08;53!UBERON:0001869;1.40e-07;32!UBERON:0002791;1.97e-07;32!UBERON:0001950;6.71e-07;20!UBERON:0002298;9.36e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.42e-18,114;UBERON:0001049,1.14e-16,56;UBERON:0005068,1.14e-16,56;UBERON:0006241,1.14e-16,56;UBERON:0007135,1.14e-16,56;UBERON:0000073,8.14e-15,53;UBERON:0002616,8.14e-15,53;UBERON:0002780,1.17e-13,41;UBERON:0001890,1.17e-13,41;UBERON:0003080,1.17e-13,41;UBERON:0006240,1.17e-13,41;UBERON:0001017,3.43e-13,81;UBERON:0000955,1.65e-12,68;UBERON:0006238,1.65e-12,68;UBERON:0001016,2.38e-11,89;UBERON:0003528,4.46e-11,34;UBERON:0002020,4.46e-11,34;UBERON:0001893,5.09e-11,34;UBERON:0002050,2.12e-10,564;UBERON:0000923,4.39e-10,560;UBERON:0010316,4.39e-10,560;UBERON:0005291,4.39e-10,560;UBERON:0006598,4.39e-10,560;UBERON:0010317,4.39e-10,560;UBERON:0002532,4.39e-10,560;UBERON:0005423,5.77e-10,581;UBERON:0002791,1.52e-09,32;UBERON:0001869,1.72e-09,32;UBERON:0010371,3.38e-09,104;UBERON:0002619,4.85e-09,22;UBERON:0003075,4.99e-09,82;UBERON:0007284,4.99e-09,82;UBERON:0000922,6.86e-09,592;UBERON:0002390,2.09e-08,98;UBERON:0003061,2.09e-08,98;UBERON:0002371,4.46e-08,76;UBERON:0002346,4.55e-08,86;UBERON:0001950,6.87e-08,20;UBERON:0003056,8.65e-08,61;UBERON:0000956,2.21e-07,25;UBERON:0000203,2.21e-07,25;UBERON:0002298,5.70e-07,6;UBERON:0000025,7.15e-07,192;UBERON:0001474,9.71e-07,82 | |||
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| ||
|short_description=p2@SNX1 | |||
}} | }} |
Latest revision as of 13:09, 18 September 2015
Short description: | p2@SNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000353874, uc002amv.2, uc002amw.2, uc002amx.2, uc002amy.2, uc010bgv.2, uc010bgw.2, uc010uio.1_5end |
EntrezGene: | SNX1 |
HGNC: | 11172 |
UniProt: | A6NKH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.16e-10 | 59 |
monocyte | 2.16e-10 | 59 |
monoblast | 2.16e-10 | 59 |
promonocyte | 2.16e-10 | 59 |
macrophage dendritic cell progenitor | 1.04e-09 | 61 |
myeloid leukocyte | 4.52e-09 | 72 |
defensive cell | 1.43e-08 | 48 |
phagocyte | 1.43e-08 | 48 |
myeloid lineage restricted progenitor cell | 3.25e-08 | 66 |
granulocyte monocyte progenitor cell | 6.02e-08 | 67 |
macrophage | 1.03e-07 | 6 |