FFCP PHASE1:Hg19::chr7:38670957..38671039,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=471 | |||
|TSSclassifier=strong | |||
|UniProt=E7EMY9,F5H533,F5H6E8 | |||
|association_with_transcript=0bp_to_ENST00000325590,ENST00000353242,ENST00000428293,ENST00000544070,uc003tgu.2,uc003tgv.2_5end | |||
|cluster_id=chr7:38670957..38671039,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_AMPH_5end | |||
|id=chr7:38670957..38671039,- | |||
|ontology_enrichment_celltype=CL:0000055!5.28e-19!180;CL:0000057!2.21e-12!75;CL:0002620!4.90e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.51e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.46e-09,76;CL:0002620,2.09e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.59e-40!82;UBERON:0005743!3.56e-39!86;UBERON:0000073!8.06e-36!94;UBERON:0001016!8.06e-36!94;UBERON:0001049!8.37e-36!57;UBERON:0005068!8.37e-36!57;UBERON:0006241!8.37e-36!57;UBERON:0007135!8.37e-36!57;UBERON:0000955!1.31e-34!69;UBERON:0006238!1.31e-34!69;UBERON:0002616!1.05e-32!59;UBERON:0003075!6.88e-32!86;UBERON:0007284!6.88e-32!86;UBERON:0002346!4.64e-29!90;UBERON:0000033!2.48e-28!123;UBERON:0000153!4.78e-28!129;UBERON:0007811!4.78e-28!129;UBERON:0007023!1.06e-27!115;UBERON:0000475!1.23e-27!365;UBERON:0003080!9.48e-27!42;UBERON:0004121!1.44e-26!169;UBERON:0002780!2.14e-26!41;UBERON:0001890!2.14e-26!41;UBERON:0006240!2.14e-26!41;UBERON:0000924!5.55e-25!173;UBERON:0006601!5.55e-25!173;UBERON:0003056!4.57e-23!61;UBERON:0002020!3.78e-22!34;UBERON:0003528!3.78e-22!34;UBERON:0001893!4.10e-22!34;UBERON:0001869!9.45e-22!32;UBERON:0002791!2.28e-21!33;UBERON:0000956!8.86e-18!25;UBERON:0000203!8.86e-18!25;UBERON:0002619!5.26e-17!22;UBERON:0001950!1.09e-15!20;UBERON:0000468!2.94e-15!659;UBERON:0000481!5.88e-14!347;UBERON:0000467!9.83e-13!625;UBERON:0000480!1.60e-12!626;UBERON:0000119!3.59e-11!312;UBERON:0000483!1.03e-10!309;UBERON:0000025!1.18e-10!194;UBERON:0000922!2.78e-10!612;UBERON:0003076!4.80e-10!15;UBERON:0003057!4.80e-10!15;UBERON:0000062!1.01e-09!511;UBERON:0002050!7.27e-09!605;UBERON:0005423!7.27e-09!605;UBERON:0000477!9.07e-09!286;UBERON:0000914!9.24e-09!83;UBERON:0002329!9.24e-09!83;UBERON:0003077!9.24e-09!83;UBERON:0003059!9.24e-09!83;UBERON:0007282!9.24e-09!83;UBERON:0009618!9.24e-09!83;UBERON:0007285!9.24e-09!83;UBERON:0000923!1.45e-08!604;UBERON:0005291!1.45e-08!604;UBERON:0006598!1.45e-08!604;UBERON:0002532!1.45e-08!604;UBERON:0004732!1.50e-08!13;UBERON:0004733!2.64e-08!12;UBERON:0002028!2.64e-08!12;UBERON:0007277!2.64e-08!12;UBERON:0004111!4.25e-08!241;UBERON:0002199!6.23e-08!45;UBERON:0002416!6.23e-08!45;UBERON:0000064!1.99e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.57e-22;32!UBERON:0003528;1.61e-21;34!UBERON:0002020;1.61e-21;34!UBERON:0001893;1.62e-21;34!UBERON:0002791;2.77e-21;32!UBERON:0002780;3.14e-21;41!UBERON:0001890;3.14e-21;41!UBERON:0000073;3.51e-21;53!UBERON:0002616;3.51e-21;53!UBERON:0000956;7.27e-20;25!UBERON:0000203;7.27e-20;25!UBERON:0002619;5.51e-19;22!UBERON:0001950;1.68e-17;20!UBERON:0000955;9.28e-17;68!UBERON:0001017;1.57e-16;75!UBERON:0001016;2.12e-14;83!UBERON:0004732;2.12e-09;13!UBERON:0004733;3.83e-09;12!UBERON:0002028;3.83e-09;12!UBERON:0007023;7.88e-09;114!UBERON:0011216;3.65e-08;132!UBERON:0010314;5.69e-08;132!UBERON:0002680;3.12e-07;9!UBERON:0001895;3.12e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-43,81;UBERON:0001049,1.16e-39,56;UBERON:0005068,1.16e-39,56;UBERON:0006241,1.16e-39,56;UBERON:0007135,1.16e-39,56;UBERON:0001016,8.63e-39,89;UBERON:0000955,1.37e-37,68;UBERON:0006238,1.37e-37,68;UBERON:0000073,1.52e-37,53;UBERON:0002616,1.52e-37,53;UBERON:0003075,5.50e-36,82;UBERON:0007284,5.50e-36,82;UBERON:0010314,7.09e-33,132;UBERON:0002346,1.28e-32,86;UBERON:0007023,9.37e-30,114;UBERON:0002780,1.72e-29,41;UBERON:0001890,1.72e-29,41;UBERON:0003080,1.72e-29,41;UBERON:0006240,1.72e-29,41;UBERON:0010371,2.07e-29,104;UBERON:0004121,3.54e-29,171;UBERON:0000924,3.54e-29,171;UBERON:0006601,3.54e-29,171;UBERON:0003056,4.19e-25,61;UBERON:0003528,1.04e-24,34;UBERON:0002020,1.04e-24,34;UBERON:0001893,1.14e-24,34;UBERON:0001869,2.91e-24,32;UBERON:0002791,2.74e-23,32;UBERON:0011216,3.45e-21,223;UBERON:0000956,8.57e-20,25;UBERON:0000203,8.57e-20,25;UBERON:0002619,6.35e-19,22;UBERON:0001950,1.93e-17,20;UBERON:0000119,1.54e-11,309;UBERON:0003076,4.25e-11,15;UBERON:0003057,4.25e-11,15;UBERON:0000483,4.85e-11,306;UBERON:0000025,3.30e-10,192;UBERON:0004732,2.03e-09,13;UBERON:0004733,3.83e-09,12;UBERON:0002028,3.83e-09,12;UBERON:0007277,3.83e-09,12;UBERON:0000479,2.41e-08,773;UBERON:0000922,3.10e-08,592;UBERON:0002199,3.74e-08,46;UBERON:0002416,3.74e-08,46;UBERON:0000923,4.82e-08,560;UBERON:0010316,4.82e-08,560;UBERON:0005291,4.82e-08,560;UBERON:0006598,4.82e-08,560;UBERON:0010317,4.82e-08,560;UBERON:0002532,4.82e-08,560;UBERON:0002050,6.07e-08,564;UBERON:0004111,9.50e-08,240;UBERON:0005423,2.79e-07,581;UBERON:0002680,3.02e-07,9;UBERON:0001895,3.02e-07,9;UBERON:0010092,3.02e-07,9 | |||
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| |||
|short_description=p1@AMPH | |||
}} |
Latest revision as of 12:59, 18 September 2015
Short description: | p1@AMPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMPH_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000325590, ENST00000353242, ENST00000428293, ENST00000544070, uc003tgu.2, uc003tgv.2_5end |
EntrezGene: | AMPH |
HGNC: | 471 |
UniProt: | E7EMY9F5H533F5H6E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.46e-09 | 76 |
skin fibroblast | 2.09e-07 | 23 |