FFCP PHASE1:Hg19::chr2:75796837..75796849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84141 | |EntrezGene=84141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25816 | |HGNC=25816 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8M9 | |UniProt=Q9H8M9 | ||
|association_with_transcript=0bp_to_ENST00000233712,NM_032181,uc002snk.1_5end | |||
|cluster_id=chr2:75796837..75796849,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_6_at_FAM176A_5end | |||
|id=chr2:75796837..75796849,- | |||
|ontology_enrichment_celltype=CL:0002541!1.66e-17!3;CL:0000349!6.84e-17!3;CL:0002577!6.84e-17!3;CL:0002536!3.18e-12!2;CL:1000507!3.37e-07!12;CL:1000494!3.37e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002536;1.29e-36;2!CL:0002541;1.94e-25;3!CL:0000349;8.03e-24;19!CL:0002577;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,1.42e-36,2;CL:0002541,2.07e-25,3;CL:0000349,8.22e-24,19;CL:0002577,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.56e-19;1!UBERON:0007297;2.27e-10;2!UBERON:0003918;3.50e-08;10!UBERON:0007687;3.50e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.88e-45!14;UBERON:0000158!1.88e-45!14;UBERON:0003124!6.30e-38!7;UBERON:0000478!1.31e-25!24;UBERON:0001987!3.30e-22!4;UBERON:0004340!3.30e-22!4;UBERON:0000476!1.66e-17!3;UBERON:0000920!1.66e-17!3;UBERON:0000305!9.64e-13!7;UBERON:0002113!1.37e-11!27;UBERON:0003918!1.37e-11!27;UBERON:0005095!1.37e-11!27;UBERON:0007687!1.37e-11!27;UBERON:0004871!3.67e-11!8;UBERON:0000489!1.38e-09!32;UBERON:0004923!1.58e-09!57;UBERON:0006554!2.43e-08!44;UBERON:0001008!4.02e-08!45;UBERON:0006555!1.14e-07!17;UBERON:0005103!1.14e-07!17;UBERON:0000083!1.14e-07!17;UBERON:0009201!1.14e-07!17;UBERON:0004819!1.14e-07!17;UBERON:0006553!1.14e-07!17;UBERON:0003074!1.14e-07!17;UBERON:0003060!1.14e-07!17;UBERON:0000080!3.16e-07!18;UBERON:0002120!3.16e-07!18;UBERON:0004875!3.16e-07!18;UBERON:0005721!3.16e-07!18;UBERON:0005754!3.16e-07!18;UBERON:0007297!3.16e-07!18;UBERON:0009773!3.37e-07!12;UBERON:0001231!3.37e-07!12;UBERON:0004810!3.37e-07!12;UBERON:0001301!5.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.74e-29;10!UBERON:0000158;2.74e-29;10!UBERON:0000478;6.17e-27;24!UBERON:0003124;1.94e-25;3!UBERON:0000920;1.94e-25;3!UBERON:0001301;2.25e-19;1!UBERON:0001987;5.90e-19;4!UBERON:0000305;3.22e-11;7!UBERON:0006947;2.47e-07;3!UBERON:0004054;2.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.28e-46,14;UBERON:0000158,4.28e-46,14;UBERON:0003124,1.09e-41,7;UBERON:0000478,6.31e-27,24;UBERON:0000920,2.07e-25,3;UBERON:0001301,2.25e-19,1;UBERON:0001987,5.64e-19,4;UBERON:0004340,5.64e-19,4;UBERON:0000305,3.30e-11,7;UBERON:0004871,6.34e-10,8;UBERON:0004923,9.77e-10,66;UBERON:0006554,1.06e-09,47;UBERON:0001008,1.68e-09,48;UBERON:0006947,2.47e-07,3;UBERON:0004054,2.47e-07,3;UBERON:0004175,4.14e-07,25;UBERON:0002113,6.97e-07,26;UBERON:0003918,6.97e-07,26;UBERON:0011143,6.97e-07,26;UBERON:0005095,6.97e-07,26;UBERON:0007687,6.97e-07,26 | |||
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|short_description=p6@FAM176A | |||
}} | }} |
Latest revision as of 12:53, 18 September 2015
Short description: | p6@FAM176A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM176A_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000233712, NM_032181, uc002snk.1_5end |
EntrezGene: | FAM176A |
HGNC: | 25816 |
UniProt: | Q9H8M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.42e-36 | 2 |
chorionic membrane mesenchymal stem cell | 2.07e-25 | 3 |
extraembryonic cell | 8.22e-24 | 19 |
placental epithelial cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.28e-46 | 14 |
membranous layer | 4.28e-46 | 14 |
chorion | 1.09e-41 | 7 |
extraembryonic structure | 6.31e-27 | 24 |
egg chorion | 2.07e-25 | 3 |
epididymis | 2.25e-19 | 1 |
placenta | 5.64e-19 | 4 |
allantois | 5.64e-19 | 4 |
amnion | 3.30e-11 | 7 |
somatic layer of lateral plate mesoderm | 6.34e-10 | 8 |
organ component layer | 9.77e-10 | 66 |
urinary system structure | 1.06e-09 | 47 |
renal system | 1.68e-09 | 48 |
male genital duct | 2.47e-07 | 3 |
internal male genitalia | 2.47e-07 | 3 |
internal genitalia | 4.14e-07 | 25 |
kidney | 6.97e-07 | 26 |
kidney mesenchyme | 6.97e-07 | 26 |
upper urinary tract | 6.97e-07 | 26 |
kidney rudiment | 6.97e-07 | 26 |
kidney field | 6.97e-07 | 26 |