FFCP PHASE1:Hg19::chr1:52902618..52902666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23318 | |EntrezGene=23318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28981 | |HGNC=28981 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=260bp_to_ENST00000470212_5end | |association_with_transcript=260bp_to_ENST00000470212_5end | ||
|cluster_id=chr1:52902618..52902666,- | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_11_at_ZCCHC11_5end | |description=CAGE_peak_11_at_ZCCHC11_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.49e-38;7!CL:0000586;1.49e-38;7 | |ontology_enrichment_celltype_v019=CL:0000039;1.49e-38;7!CL:0000586;1.49e-38;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.49e-38,7;CL:0000586,1.49e-38,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0003133;9.62e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0003133;9.62e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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| ||
|short_description=p11@ZCCHC11 | |short_description=p11@ZCCHC11 | ||
}} | }} |
Latest revision as of 12:50, 18 September 2015
Short description: | p11@ZCCHC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ZCCHC11_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 260bp_to_ENST00000470212_5end |
EntrezGene: | ZCCHC11 |
HGNC: | 28981 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.49e-38 | 7 |
germ cell | 1.49e-38 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |