FFCP PHASE1:Hg19::chr11:59522873..59522896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6809 | |EntrezGene=6809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11438 | |HGNC=11438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001nog.2,uc010rkx.1,uc010rky.1_5end | |association_with_transcript=0bp_to_uc001nog.2,uc010rkx.1,uc010rky.1_5end | ||
|cluster_id=chr11:59522873..59522896,+ | |||
|description=CAGE_peak_3_at_STX3_5end | |description=CAGE_peak_3_at_STX3_5end | ||
|id=chr11:59522873..59522896,+ | |id=chr11:59522873..59522896,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.51e-13!76;CL:0000557!7.78e-11!71;CL:0000839!9.03e-10!70;CL:0000066!1.11e-09!254;CL:0002009!3.31e-08!65;CL:0002194!3.40e-08!63;CL:0000576!3.40e-08!63;CL:0000040!3.40e-08!63;CL:0000559!3.40e-08!63;CL:0002057!3.92e-08!42;CL:0000860!1.21e-07!45 | |ontology_enrichment_celltype=CL:0000766!1.51e-13!76;CL:0000557!7.78e-11!71;CL:0000839!9.03e-10!70;CL:0000066!1.11e-09!254;CL:0002009!3.31e-08!65;CL:0002194!3.40e-08!63;CL:0000576!3.40e-08!63;CL:0000040!3.40e-08!63;CL:0000559!3.40e-08!63;CL:0002057!3.92e-08!42;CL:0000860!1.21e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-13;33!CL:0002057;2.53e-13;33!CL:0000473;2.66e-12;39!CL:0000234;2.66e-12;39!CL:0000766;4.18e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.53e-13;33!CL:0002057;2.53e-13;33!CL:0000473;2.66e-12;39!CL:0000234;2.66e-12;39!CL:0000766;4.18e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.56e-16,72;CL:0000557,1.35e-12,67;CL:0000839,2.21e-11,66;CL:0000473,2.60e-11,48;CL:0000234,2.60e-11,48;CL:0000860,3.23e-10,42;CL:0002057,3.23e-10,42;CL:0002194,1.01e-09,59;CL:0000576,1.01e-09,59;CL:0000040,1.01e-09,59;CL:0000559,1.01e-09,59;CL:0002009,1.57e-09,61;CL:0000066,5.76e-08,253;CL:0000763,1.44e-07,108;CL:0000049,1.44e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-08;42 | |ontology_enrichment_development_v019=CL:0002057;4.76e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.91e-08!511;UBERON:0002193!4.77e-08!112;UBERON:0002371!9.64e-08!80;UBERON:0002390!4.83e-07!102;UBERON:0003061!4.83e-07!102;UBERON:0002405!5.07e-07!115;UBERON:0000467!7.82e-07!625 | |ontology_enrichment_uberon=UBERON:0000062!1.91e-08!511;UBERON:0002193!4.77e-08!112;UBERON:0002371!9.64e-08!80;UBERON:0002390!4.83e-07!102;UBERON:0003061!4.83e-07!102;UBERON:0002405!5.07e-07!115;UBERON:0000467!7.82e-07!625 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.81e-10,108;UBERON:0002405,1.95e-09,93;UBERON:0002371,2.24e-09,76;UBERON:0002390,2.42e-08,98;UBERON:0003061,2.42e-08,98;UBERON:0001474,1.51e-07,82;UBERON:0000922,4.04e-07,592 | |||
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| ||
|short_description=p3@STX3 | |short_description=p3@STX3 | ||
}} | }} |
Latest revision as of 12:43, 18 September 2015
Short description: | p3@STX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001nog.2, uc010rkx.1, uc010rky.1_5end |
EntrezGene: | STX3 |
HGNC: | 11438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.56e-16 | 72 |
granulocyte monocyte progenitor cell | 1.35e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.21e-11 | 66 |
defensive cell | 2.60e-11 | 48 |
phagocyte | 2.60e-11 | 48 |
classical monocyte | 3.23e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.23e-10 | 42 |
monopoietic cell | 1.01e-09 | 59 |
monocyte | 1.01e-09 | 59 |
monoblast | 1.01e-09 | 59 |
promonocyte | 1.01e-09 | 59 |
macrophage dendritic cell progenitor | 1.57e-09 | 61 |
epithelial cell | 5.76e-08 | 253 |
myeloid cell | 1.44e-07 | 108 |
common myeloid progenitor | 1.44e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.81e-10 | 108 |
immune system | 1.95e-09 | 93 |
bone marrow | 2.24e-09 | 76 |
hematopoietic system | 2.42e-08 | 98 |
blood island | 2.42e-08 | 98 |
bone element | 1.51e-07 | 82 |
embryo | 4.04e-07 | 592 |