FFCP PHASE1:Hg19::chr11:59522812..59522825,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6809 | |EntrezGene=6809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11438 | |HGNC=11438 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET77,E9PQJ8 | |UniProt=E7ET77,E9PQJ8 | ||
|association_with_transcript=-23bp_to_ENST00000437946,ENST00000533637_5end | |association_with_transcript=-23bp_to_ENST00000437946,ENST00000533637_5end | ||
|cluster_id=chr11:59522812..59522825,+ | |||
|description=CAGE_peak_4_at_STX3_5end | |description=CAGE_peak_4_at_STX3_5end | ||
|id=chr11:59522812..59522825,+ | |id=chr11:59522812..59522825,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.34e-14!76;CL:0002057!1.61e-14!42;CL:0002009!5.14e-13!65;CL:0000557!9.61e-13!71;CL:0000860!2.07e-12!45;CL:0002194!4.69e-12!63;CL:0000576!4.69e-12!63;CL:0000040!4.69e-12!63;CL:0000559!4.69e-12!63;CL:0000839!3.52e-11!70;CL:0000763!1.44e-09!112;CL:0000049!1.44e-09!112 | |ontology_enrichment_celltype=CL:0000766!1.34e-14!76;CL:0002057!1.61e-14!42;CL:0002009!5.14e-13!65;CL:0000557!9.61e-13!71;CL:0000860!2.07e-12!45;CL:0002194!4.69e-12!63;CL:0000576!4.69e-12!63;CL:0000040!4.69e-12!63;CL:0000559!4.69e-12!63;CL:0000839!3.52e-11!70;CL:0000763!1.44e-09!112;CL:0000049!1.44e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.75e-17;39!CL:0000234;2.75e-17;39!CL:0000860;2.94e-17;33!CL:0002057;2.94e-17;33!CL:0000576;2.83e-11;48!CL:0000766;2.46e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.14e-21,48;CL:0000234,9.14e-21,48;CL:0000766,7.54e-20,72;CL:0002009,5.70e-18,61;CL:0000860,2.26e-17,42;CL:0002057,2.26e-17,42;CL:0000557,5.48e-17,67;CL:0002194,2.19e-16,59;CL:0000576,2.19e-16,59;CL:0000040,2.19e-16,59;CL:0000559,2.19e-16,59;CL:0000839,4.79e-15,66;CL:0000763,1.35e-12,108;CL:0000049,1.35e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.92e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-10!80;UBERON:0001474!2.09e-09!86;UBERON:0004765!4.71e-09!101;UBERON:0001434!4.71e-09!101;UBERON:0002390!6.98e-09!102;UBERON:0003061!6.98e-09!102;UBERON:0000062!1.15e-07!511;UBERON:0002193!2.73e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!1.06e-10!80;UBERON:0001474!2.09e-09!86;UBERON:0004765!4.71e-09!101;UBERON:0001434!4.71e-09!101;UBERON:0002390!6.98e-09!102;UBERON:0003061!6.98e-09!102;UBERON:0000062!1.15e-07!511;UBERON:0002193!2.73e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.56e-15,76;UBERON:0001474,8.79e-14,82;UBERON:0004765,1.66e-13,90;UBERON:0002390,1.45e-12,98;UBERON:0003061,1.45e-12,98;UBERON:0001434,9.84e-11,100;UBERON:0002193,4.52e-10,108;UBERON:0002405,5.94e-10,93;UBERON:0005631,9.84e-07,14;UBERON:0000158,9.84e-07,14 | |||
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| ||
|short_description=p4@STX3 | |short_description=p4@STX3 | ||
}} | }} |
Latest revision as of 12:41, 18 September 2015
Short description: | p4@STX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000437946, ENST00000533637_5end |
EntrezGene: | STX3 |
HGNC: | 11438 |
UniProt: | E7ET77E9PQJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.14e-21 | 48 |
phagocyte | 9.14e-21 | 48 |
myeloid leukocyte | 7.54e-20 | 72 |
macrophage dendritic cell progenitor | 5.70e-18 | 61 |
classical monocyte | 2.26e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-17 | 42 |
granulocyte monocyte progenitor cell | 5.48e-17 | 67 |
monopoietic cell | 2.19e-16 | 59 |
monocyte | 2.19e-16 | 59 |
monoblast | 2.19e-16 | 59 |
promonocyte | 2.19e-16 | 59 |
myeloid lineage restricted progenitor cell | 4.79e-15 | 66 |
myeloid cell | 1.35e-12 | 108 |
common myeloid progenitor | 1.35e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.56e-15 | 76 |
bone element | 8.79e-14 | 82 |
skeletal element | 1.66e-13 | 90 |
hematopoietic system | 1.45e-12 | 98 |
blood island | 1.45e-12 | 98 |
skeletal system | 9.84e-11 | 100 |
hemolymphoid system | 4.52e-10 | 108 |
immune system | 5.94e-10 | 93 |
extraembryonic membrane | 9.84e-07 | 14 |
membranous layer | 9.84e-07 | 14 |