FFCP PHASE1:Hg19::chr11:59522033..59522057,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11438 | |||
|TSSclassifier=strong | |||
|UniProt=Q13277,B4DME0,Q53YE2 | |||
|association_with_transcript=-474bp_to_ENST00000337979,ENST00000535361,NM_001178040,NM_004177_5end | |||
|cluster_id=chr11:59522033..59522057,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_10_at_STX3_5end | |||
|id=chr11:59522033..59522057,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.55e-41!76;CL:0002057!1.96e-40!42;CL:0000860!5.27e-37!45;CL:0000839!5.39e-32!70;CL:0000557!1.64e-31!71;CL:0000763!2.61e-30!112;CL:0000049!2.61e-30!112;CL:0002009!2.92e-25!65;CL:0000738!1.08e-24!140;CL:0002194!7.42e-23!63;CL:0000576!7.42e-23!63;CL:0000040!7.42e-23!63;CL:0000559!7.42e-23!63;CL:0002032!1.74e-19!165;CL:0000837!1.74e-19!165;CL:0000037!4.47e-19!172;CL:0000566!4.47e-19!172;CL:0002031!5.77e-19!124;CL:0000988!3.72e-17!182;CL:0000094!3.64e-16!8;CL:0002087!1.03e-11!119;CL:0000081!3.17e-11!11;CL:0002274!8.26e-11!5;CL:0000457!8.26e-11!5;CL:0002191!8.26e-11!5;CL:0000097!8.26e-11!5;CL:0000831!8.26e-11!5;CL:0002028!8.26e-11!5;CL:0000775!2.19e-07!3;CL:0002393!5.92e-07!9;CL:0002397!5.92e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.02e-47;5!CL:0000094;1.16e-30;8!CL:0000775;5.07e-30;3!CL:0000163;4.43e-26;9!CL:0000081;2.68e-22;11!CL:0000771;7.69e-21;2!CL:0000766;1.08e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.74e-47,5;CL:0002028,7.74e-47,5;CL:0000094,1.16e-30,8;CL:0000775,5.07e-30,3;CL:0000766,6.82e-27,72;CL:0000163,4.68e-26,9;CL:0000081,2.69e-22,11;CL:0000771,7.70e-21,2;CL:0000763,7.81e-20,108;CL:0000049,7.81e-20,108;CL:0000738,2.90e-15,136;CL:0000557,5.21e-15,67;CL:0002032,1.64e-12,161;CL:0000837,1.64e-12,161;CL:0000839,1.67e-12,66;CL:0000037,6.92e-12,168;CL:0000988,3.74e-11,177;CL:0002031,1.06e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.48e-34!102;UBERON:0003061!6.48e-34!102;UBERON:0002193!1.57e-32!112;UBERON:0002371!1.38e-26!80;UBERON:0001474!6.96e-24!86;UBERON:0002405!5.59e-21!115;UBERON:0004765!1.44e-18!101;UBERON:0001434!1.44e-18!101;UBERON:0003081!1.31e-09!216;UBERON:0002204!2.84e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-15;15!UBERON:0000179;1.13e-15;15!UBERON:0000463;1.13e-15;15!UBERON:0002390;2.86e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.62e-22,98;UBERON:0003061,8.62e-22,98;UBERON:0002193,1.45e-19,108;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15;UBERON:0002371,4.62e-13,76;UBERON:0001474,5.37e-12,82;UBERON:0004765,8.54e-11,90;UBERON:0002405,2.13e-10,93;UBERON:0001434,1.47e-09,100;UBERON:0003081,2.93e-09,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0.290796477559129,0,0.970336244751265,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,1.5369642391746,0.945928919554341,0.344745680736619,0,1.35426486594342,0.752969358170419,0.272906150057846,0,0.612167784741805,0.641858054152187,0,0.329851300186716,0.997318288108159,0.852449501065388,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,1.73751075764093,0,0.736555271975129,1.58231193720442,0.211255286311942,0,0.419317291016752,0.112328631146495,0.300353785683013,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,1.32072651019839,2.28060927094849,1.72943944100354,2.01987893482208,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,13.4821264310493,8.97484377612075,19.8919446449297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,0,0.952927101831156,1.23408681925858,1.94541993357815,3.7802200606668,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,3.0952078182318,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p10@STX3 | |||
}} |
Latest revision as of 12:39, 18 September 2015
Short description: | p10@STX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_STX3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -474bp_to_ENST00000337979, ENST00000535361, NM_001178040, NM_004177_5end |
EntrezGene: | STX3 |
HGNC: | 11438 |
UniProt: | Q13277B4DME0Q53YE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.74e-47 | 5 |
basophil mast progenitor cell | 7.74e-47 | 5 |
granulocyte | 1.16e-30 | 8 |
neutrophil | 5.07e-30 | 3 |
myeloid leukocyte | 6.82e-27 | 72 |
endocrine cell | 4.68e-26 | 9 |
blood cell | 2.69e-22 | 11 |
eosinophil | 7.70e-21 | 2 |
myeloid cell | 7.81e-20 | 108 |
common myeloid progenitor | 7.81e-20 | 108 |
leukocyte | 2.90e-15 | 136 |
granulocyte monocyte progenitor cell | 5.21e-15 | 67 |
hematopoietic oligopotent progenitor cell | 1.64e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-12 | 161 |
myeloid lineage restricted progenitor cell | 1.67e-12 | 66 |
hematopoietic stem cell | 6.92e-12 | 168 |
hematopoietic cell | 3.74e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.62e-22 | 98 |
blood island | 8.62e-22 | 98 |
hemolymphoid system | 1.45e-19 | 108 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |
bone marrow | 4.62e-13 | 76 |
bone element | 5.37e-12 | 82 |
skeletal element | 8.54e-11 | 90 |
immune system | 2.13e-10 | 93 |
skeletal system | 1.47e-09 | 100 |
lateral plate mesoderm | 2.93e-09 | 203 |