FFCP PHASE1:Hg19::chr1:52521091..52521102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51060 | |EntrezGene=51060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24626 | |HGNC=24626 | ||
|TSSclassifier=strong | |||
|UniProt=O95831,O95881 | |UniProt=O95831,O95881 | ||
|association_with_transcript=-44bp_to_NM_015913,uc001cti.2_5end | |association_with_transcript=-44bp_to_NM_015913,uc001cti.2_5end | ||
|cluster_id=chr1:52521091..52521102,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_16_at_TXNDC12_5end | |description=CAGE_peak_16_at_TXNDC12_5end | ||
|id=chr1:52521091..52521102,- | |id=chr1:52521091..52521102,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.04e-07;7!CL:0000586;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.39e-07,7;CL:0000586,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.70e-36;10!UBERON:0005564;2.70e-36;10 | |||
|ontology_enrichment_disease=DOID:14566!2.31e-07!239;DOID:305!9.88e-07!106 | |ontology_enrichment_disease=DOID:14566!2.31e-07!239;DOID:305!9.88e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.01e-10!8;UBERON:0003135!1.86e-09!11;UBERON:0004176!5.10e-08!22;UBERON:0003101!6.13e-08!22;UBERON:0000079!6.13e-08!22;UBERON:0000991!4.84e-07!21;UBERON:0009196!4.84e-07!21;UBERON:0009117!4.84e-07!21;UBERON:0005564!4.84e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!3.01e-10!8;UBERON:0003135!1.86e-09!11;UBERON:0004176!5.10e-08!22;UBERON:0003101!6.13e-08!22;UBERON:0000079!6.13e-08!22;UBERON:0000991!4.84e-07!21;UBERON:0009196!4.84e-07!21;UBERON:0009117!4.84e-07!21;UBERON:0005564!4.84e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.34e-45;8!UBERON:0001282;2.21e-40;1!UBERON:0009842;2.21e-40;1!UBERON:0003704;2.21e-40;1!UBERON:0001171;2.21e-40;1!UBERON:0001172;2.21e-40;1!UBERON:0003135;4.29e-33;11!UBERON:0000991;8.29e-18;21!UBERON:0003101;4.85e-17;22!UBERON:0000079;4.85e-17;22!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0003133;1.88e-07;44!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.04e-45,8;UBERON:0001282,1.48e-40,1;UBERON:0009842,1.48e-40,1;UBERON:0003704,1.48e-40,1;UBERON:0001171,1.48e-40,1;UBERON:0001172,1.48e-40,1;UBERON:0003135,4.79e-33,11;UBERON:0000991,8.78e-18,21;UBERON:0009196,8.78e-18,21;UBERON:0009117,8.78e-18,21;UBERON:0005564,8.78e-18,21;UBERON:0004176,5.13e-17,22;UBERON:0003101,5.13e-17,22;UBERON:0000079,5.13e-17,22;UBERON:0001280,1.60e-14,3;UBERON:0004647,1.60e-14,3;UBERON:0005171,1.60e-14,3;UBERON:0002323,1.43e-08,46;UBERON:0003133,3.04e-08,48;UBERON:0004458,4.32e-08,49;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0003886,2.08e-07,54;UBERON:0005156,7.68e-07,59;UBERON:0000990,7.68e-07,59 | |||
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| ||
|short_description=p16@TXNDC12 | |short_description=p16@TXNDC12 | ||
}} | }} |
Latest revision as of 12:28, 18 September 2015
Short description: | p16@TXNDC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TXNDC12_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -44bp_to_NM_015913, uc001cti.2_5end |
EntrezGene: | TXNDC12 |
HGNC: | 24626 |
UniProt: | O95831O95881 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.39e-07 | 7 |
germ cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.04e-45 | 8 |
intralobular bile duct | 1.48e-40 | 1 |
acinus | 1.48e-40 | 1 |
intrahepatic bile duct | 1.48e-40 | 1 |
portal lobule | 1.48e-40 | 1 |
hepatic acinus | 1.48e-40 | 1 |
male reproductive organ | 4.79e-33 | 11 |
gonad | 8.78e-18 | 21 |
indifferent external genitalia | 8.78e-18 | 21 |
indifferent gonad | 8.78e-18 | 21 |
gonad primordium | 8.78e-18 | 21 |
external genitalia | 5.13e-17 | 22 |
male organism | 5.13e-17 | 22 |
male reproductive system | 5.13e-17 | 22 |
liver parenchyma | 1.60e-14 | 3 |
liver lobule | 1.60e-14 | 3 |
hepatic duct | 1.60e-14 | 3 |
body cavity | 1.43e-08 | 46 |
reproductive organ | 3.04e-08 | 48 |
body cavity or lining | 4.32e-08 | 49 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
body cavity precursor | 2.08e-07 | 54 |
reproductive structure | 7.68e-07 | 59 |
reproductive system | 7.68e-07 | 59 |