FFCP PHASE1:Hg19::chr1:52521091..52521102,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51060 | |EntrezGene=51060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24626 | |HGNC=24626 | ||
|TSSclassifier=strong | |||
|UniProt=O95831,O95881 | |UniProt=O95831,O95881 | ||
|association_with_transcript=-44bp_to_NM_015913,uc001cti.2_5end | |association_with_transcript=-44bp_to_NM_015913,uc001cti.2_5end | ||
|cluster_id=chr1:52521091..52521102,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_16_at_TXNDC12_5end | |description=CAGE_peak_16_at_TXNDC12_5end | ||
|id=chr1:52521091..52521102,- | |id=chr1:52521091..52521102,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.04e-07;7!CL:0000586;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.39e-07,7;CL:0000586,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.70e-36;10!UBERON:0005564;2.70e-36;10 | |||
|ontology_enrichment_disease=DOID:14566!2.31e-07!239;DOID:305!9.88e-07!106 | |ontology_enrichment_disease=DOID:14566!2.31e-07!239;DOID:305!9.88e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.01e-10!8;UBERON:0003135!1.86e-09!11;UBERON:0004176!5.10e-08!22;UBERON:0003101!6.13e-08!22;UBERON:0000079!6.13e-08!22;UBERON:0000991!4.84e-07!21;UBERON:0009196!4.84e-07!21;UBERON:0009117!4.84e-07!21;UBERON:0005564!4.84e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.34e-45;8!UBERON:0001282;2.21e-40;1!UBERON:0009842;2.21e-40;1!UBERON:0003704;2.21e-40;1!UBERON:0001171;2.21e-40;1!UBERON:0001172;2.21e-40;1!UBERON:0003135;4.29e-33;11!UBERON:0000991;8.29e-18;21!UBERON:0003101;4.85e-17;22!UBERON:0000079;4.85e-17;22!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0003133;1.88e-07;44!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.04e-45,8;UBERON:0001282,1.48e-40,1;UBERON:0009842,1.48e-40,1;UBERON:0003704,1.48e-40,1;UBERON:0001171,1.48e-40,1;UBERON:0001172,1.48e-40,1;UBERON:0003135,4.79e-33,11;UBERON:0000991,8.78e-18,21;UBERON:0009196,8.78e-18,21;UBERON:0009117,8.78e-18,21;UBERON:0005564,8.78e-18,21;UBERON:0004176,5.13e-17,22;UBERON:0003101,5.13e-17,22;UBERON:0000079,5.13e-17,22;UBERON:0001280,1.60e-14,3;UBERON:0004647,1.60e-14,3;UBERON:0005171,1.60e-14,3;UBERON:0002323,1.43e-08,46;UBERON:0003133,3.04e-08,48;UBERON:0004458,4.32e-08,49;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0003886,2.08e-07,54;UBERON:0005156,7.68e-07,59;UBERON:0000990,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.267096106940212,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0.229073192331831,0.514784993585894,0.288109595976299,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.295282444544246,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.26721740526556,1.01084389488329,0.250707539292375,2.8795905322931,5.35928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.267096106940212,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0.229073192331831,0.514784993585894,0.288109595976299,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.295282444544246,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0.26721740526556,1.01084389488329,0.250707539292375,2.8795905322931,5.35928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p16@TXNDC12 | |short_description=p16@TXNDC12 | ||
}} | }} |
Latest revision as of 12:28, 18 September 2015
Short description: | p16@TXNDC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TXNDC12_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -44bp_to_NM_015913, uc001cti.2_5end |
EntrezGene: | TXNDC12 |
HGNC: | 24626 |
UniProt: | O95831O95881 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.39e-07 | 7 |
germ cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.04e-45 | 8 |
intralobular bile duct | 1.48e-40 | 1 |
acinus | 1.48e-40 | 1 |
intrahepatic bile duct | 1.48e-40 | 1 |
portal lobule | 1.48e-40 | 1 |
hepatic acinus | 1.48e-40 | 1 |
male reproductive organ | 4.79e-33 | 11 |
gonad | 8.78e-18 | 21 |
indifferent external genitalia | 8.78e-18 | 21 |
indifferent gonad | 8.78e-18 | 21 |
gonad primordium | 8.78e-18 | 21 |
external genitalia | 5.13e-17 | 22 |
male organism | 5.13e-17 | 22 |
male reproductive system | 5.13e-17 | 22 |
liver parenchyma | 1.60e-14 | 3 |
liver lobule | 1.60e-14 | 3 |
hepatic duct | 1.60e-14 | 3 |
body cavity | 1.43e-08 | 46 |
reproductive organ | 3.04e-08 | 48 |
body cavity or lining | 4.32e-08 | 49 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
body cavity precursor | 2.08e-07 | 54 |
reproductive structure | 7.68e-07 | 59 |
reproductive system | 7.68e-07 | 59 |