FFCP PHASE1:Hg19::chr11:58979658..58979676,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29619 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_AK095457_5end | |||
|cluster_id=chr11:58979658..58979676,- | |||
|coexpression_cluster_id=C3165 | |||
|description=CAGE_peak_3_at_MPEG1_5end | |||
|id=chr11:58979658..58979676,- | |||
|ontology_enrichment_celltype=CL:0002009!1.33e-57!65;CL:0002057!7.53e-55!42;CL:0002194!1.46e-54!63;CL:0000576!1.46e-54!63;CL:0000040!1.46e-54!63;CL:0000559!1.46e-54!63;CL:0000766!1.12e-53!76;CL:0000557!2.10e-51!71;CL:0000860!2.59e-50!45;CL:0000839!1.37e-47!70;CL:0000738!7.50e-47!140;CL:0002087!1.10e-41!119;CL:0000763!1.31e-38!112;CL:0000049!1.31e-38!112;CL:0000037!7.14e-38!172;CL:0000566!7.14e-38!172;CL:0002031!2.43e-36!124;CL:0000988!1.33e-34!182;CL:0002032!3.30e-33!165;CL:0000837!3.30e-33!165;CL:0002393!1.81e-11!9;CL:0002397!1.81e-11!9;CL:0000134!7.07e-08!358;CL:0002320!2.13e-07!365;CL:0000784!3.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-49;33!CL:0002057;1.36e-49;33!CL:0000473;8.74e-47;39!CL:0000234;8.74e-47;39!CL:0000576;7.42e-37;48!CL:0000766;1.33e-23;69!CL:0000763;1.33e-14;100!CL:0000784;3.33e-14;3!CL:0002087;5.10e-14;104!CL:0000738;1.95e-12;136!CL:0000988;5.21e-08;177!CL:0000235;7.74e-07;6!CL:0000219;8.46e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.77e-64,48;CL:0000234,3.77e-64,48;CL:0002009,1.05e-63,61;CL:0002194,7.23e-62,59;CL:0000576,7.23e-62,59;CL:0000040,7.23e-62,59;CL:0000559,7.23e-62,59;CL:0000860,9.00e-59,42;CL:0002057,9.00e-59,42;CL:0000557,2.16e-57,67;CL:0000766,1.82e-56,72;CL:0000839,1.33e-54,66;CL:0000738,2.01e-41,136;CL:0000763,1.39e-37,108;CL:0000049,1.39e-37,108;CL:0002087,2.46e-37,115;CL:0002031,1.83e-35,120;CL:0000037,7.10e-32,168;CL:0000988,8.30e-30,177;CL:0002032,8.20e-28,161;CL:0000837,8.20e-28,161;CL:0000784,3.34e-14,3;CL:0000134,1.92e-10,354;CL:0002320,4.56e-10,361;CL:0000219,9.55e-09,386;CL:0000048,3.88e-07,427;CL:0002393,5.20e-07,9;CL:0002397,5.20e-07,9;CL:0000723,6.45e-07,433;CL:0000235,8.40e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.42e-44;42!CL:0000049;6.14e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-58!102;UBERON:0003061!1.02e-58!102;UBERON:0002193!1.85e-55!112;UBERON:0002371!7.61e-44!80;UBERON:0001474!1.09e-39!86;UBERON:0002405!3.41e-37!115;UBERON:0004765!1.78e-31!101;UBERON:0001434!1.78e-31!101;UBERON:0003081!8.11e-22!216;UBERON:0002204!9.44e-15!167;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0007023!9.15e-08!115;UBERON:0002384!3.63e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.15e-57,98;UBERON:0003061,4.15e-57,98;UBERON:0002193,4.64e-51,108;UBERON:0002371,9.09e-50,76;UBERON:0001474,1.33e-45,82;UBERON:0002405,4.56e-45,93;UBERON:0004765,6.62e-41,90;UBERON:0001434,4.43e-36,100;UBERON:0003081,1.39e-24,203;UBERON:0002204,1.37e-18,167;UBERON:0000926,1.13e-12,315;UBERON:0004120,1.13e-12,315;UBERON:0006603,1.13e-12,315;UBERON:0002384,1.48e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,1.40381113229099,0.651032612147555,2.68698569087909,0.32389366601898,1.03030227053675,2.61716829803216,2.26725566213286,0.970336244751265,3.48643555358527,0.822335776043652,1.54853185447552,4.89077066947656,1.5369642391746,2.12834006899727,3.10271112662957,1.29096936716765,0,3.9530891303947,0.818718450173537,0.898893937780338,5.81559395504715,0,3.19668562899521,4.61791820261403,2.19410023383795,0.852449501065388,2.61188314765726,1.13477044938228,0,4.77372463987812,1.0429658368404,0.65156653411535,1.21079900526674,0.736555271975129,0.632924774881769,0.845021145247767,1.06302149982522,1.04829322754188,1.34794357375794,1.20141514273205,1.76798145366788,0.570025487482497,1.79025009479181,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,2.27685187643779,2.34894875748376,6.49864487812889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,15.0249093312365,7.43593384014166,10.0293525358983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,1.70894156152249,0,0.411362273086194,0.648473311192717,1.08006287447623,3.17250070517708,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.694567422971502,0.437119121007915,0,0,0,0,0,0,0,3.853340637174,2.44939974299593,0.299823467774787,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.387533459016037,0.31037357147929,0,0.0636471582781649,0.202117188958219,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,1.00636896795513,0.320568492303233 | |||
|short_description=p3@MPEG1 | |||
}} |
Latest revision as of 12:11, 18 September 2015
Short description: | p3@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MPEG1_5end |
Coexpression cluster: | C3165_Dendritic_CD14_Monocytederived_Macrophage_splenic_CD14CD16_spleen |
Association with transcript: | -85bp_to_AK095457_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.15e-57 | 98 |
blood island | 4.15e-57 | 98 |
hemolymphoid system | 4.64e-51 | 108 |
bone marrow | 9.09e-50 | 76 |
bone element | 1.33e-45 | 82 |
immune system | 4.56e-45 | 93 |
skeletal element | 6.62e-41 | 90 |
skeletal system | 4.43e-36 | 100 |
lateral plate mesoderm | 1.39e-24 | 203 |
musculoskeletal system | 1.37e-18 | 167 |
mesoderm | 1.13e-12 | 315 |
mesoderm-derived structure | 1.13e-12 | 315 |
presumptive mesoderm | 1.13e-12 | 315 |
connective tissue | 1.48e-09 | 371 |