FFCP PHASE1:Hg19::chr15:63413990..63414016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114294 | |EntrezGene=114294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16468 | |HGNC=16468 | ||
|TSSclassifier=strong | |||
|UniProt=P83111 | |UniProt=P83111 | ||
|association_with_transcript=0bp_to_ENST00000261893,NM_032857,NM_171846_5end | |association_with_transcript=0bp_to_ENST00000261893,NM_032857,NM_171846_5end | ||
|cluster_id=chr15:63413990..63414016,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_LACTB_5end | |description=CAGE_peak_3_at_LACTB_5end | ||
|id=chr15:63413990..63414016,+ | |id=chr15:63413990..63414016,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.84e-32!76;CL:0000557!1.67e-28!71;CL:0002009!4.48e-28!65;CL:0002194!2.86e-27!63;CL:0000576!2.86e-27!63;CL:0000040!2.86e-27!63;CL:0000559!2.86e-27!63;CL:0002057!4.08e-27!42;CL:0000839!9.01e-26!70;CL:0000860!9.23e-24!45;CL:0000738!2.22e-19!140;CL:0000763!1.18e-18!112;CL:0000049!1.18e-18!112;CL:0002031!1.26e-14!124;CL:0002087!1.27e-14!119;CL:0000988!1.02e-11!182;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000034!2.11e-07!444;CL:0000048!4.48e-07!430;CL:0000723!5.82e-07!436 | |ontology_enrichment_celltype=CL:0000766!1.84e-32!76;CL:0000557!1.67e-28!71;CL:0002009!4.48e-28!65;CL:0002194!2.86e-27!63;CL:0000576!2.86e-27!63;CL:0000040!2.86e-27!63;CL:0000559!2.86e-27!63;CL:0002057!4.08e-27!42;CL:0000839!9.01e-26!70;CL:0000860!9.23e-24!45;CL:0000738!2.22e-19!140;CL:0000763!1.18e-18!112;CL:0000049!1.18e-18!112;CL:0002031!1.26e-14!124;CL:0002087!1.27e-14!119;CL:0000988!1.02e-11!182;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000034!2.11e-07!444;CL:0000048!4.48e-07!430;CL:0000723!5.82e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-20;33!CL:0002057;2.52e-20;33!CL:0000473;3.94e-20;39!CL:0000234;3.94e-20;39!CL:0000576;2.74e-17;48!CL:0000766;1.21e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.07e-36,72;CL:0000557,9.02e-32,67;CL:0002009,1.46e-31,61;CL:0000473,8.61e-31,48;CL:0000234,8.61e-31,48;CL:0002194,9.09e-31,59;CL:0000576,9.09e-31,59;CL:0000040,9.09e-31,59;CL:0000559,9.09e-31,59;CL:0000839,7.83e-29,66;CL:0000860,4.08e-27,42;CL:0002057,4.08e-27,42;CL:0000738,7.21e-21,136;CL:0000763,2.32e-20,108;CL:0000049,2.32e-20,108;CL:0002087,5.28e-16,115;CL:0002031,5.84e-16,120;CL:0000988,7.03e-13,177;CL:0002032,1.15e-12,161;CL:0000837,1.15e-12,161;CL:0000037,1.53e-12,168;CL:0000034,4.86e-08,441;CL:0000048,1.06e-07,427;CL:0000723,1.40e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.25e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.29e-29!112;UBERON:0002390!1.37e-28!102;UBERON:0003061!1.37e-28!102;UBERON:0002371!2.73e-26!80;UBERON:0001474!1.04e-21!86;UBERON:0002405!1.23e-19!115;UBERON:0004765!1.56e-19!101;UBERON:0001434!1.56e-19!101;UBERON:0002204!7.69e-17!167;UBERON:0003081!3.90e-13!216;UBERON:0000926!5.60e-08!448;UBERON:0004120!5.60e-08!448;UBERON:0006603!5.60e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.34e-32,108;UBERON:0002390,4.45e-31,98;UBERON:0003061,4.45e-31,98;UBERON:0002371,4.19e-29,76;UBERON:0002405,1.79e-27,93;UBERON:0001474,5.09e-24,82;UBERON:0004765,5.10e-24,90;UBERON:0001434,1.30e-20,100;UBERON:0002204,9.54e-18,167;UBERON:0003081,3.54e-15,203;UBERON:0000926,9.79e-15,315;UBERON:0004120,9.79e-15,315;UBERON:0006603,9.79e-15,315;UBERON:0002050,1.58e-07,564;UBERON:0000923,6.02e-07,560;UBERON:0010316,6.02e-07,560;UBERON:0005291,6.02e-07,560;UBERON:0006598,6.02e-07,560;UBERON:0010317,6.02e-07,560;UBERON:0002532,6.02e-07,560 | |||
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| ||
|short_description=p3@LACTB | |short_description=p3@LACTB | ||
}} | }} |
Latest revision as of 12:03, 18 September 2015
Short description: | p3@LACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LACTB_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000261893, NM_032857, NM_171846_5end |
EntrezGene: | LACTB |
HGNC: | 16468 |
UniProt: | P83111 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.07e-36 | 72 |
granulocyte monocyte progenitor cell | 9.02e-32 | 67 |
macrophage dendritic cell progenitor | 1.46e-31 | 61 |
defensive cell | 8.61e-31 | 48 |
phagocyte | 8.61e-31 | 48 |
monopoietic cell | 9.09e-31 | 59 |
monocyte | 9.09e-31 | 59 |
monoblast | 9.09e-31 | 59 |
promonocyte | 9.09e-31 | 59 |
myeloid lineage restricted progenitor cell | 7.83e-29 | 66 |
classical monocyte | 4.08e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-27 | 42 |
leukocyte | 7.21e-21 | 136 |
myeloid cell | 2.32e-20 | 108 |
common myeloid progenitor | 2.32e-20 | 108 |
nongranular leukocyte | 5.28e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.84e-16 | 120 |
hematopoietic cell | 7.03e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-12 | 161 |
hematopoietic stem cell | 1.53e-12 | 168 |
stem cell | 4.86e-08 | 441 |
multi fate stem cell | 1.06e-07 | 427 |
somatic stem cell | 1.40e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.34e-32 | 108 |
hematopoietic system | 4.45e-31 | 98 |
blood island | 4.45e-31 | 98 |
bone marrow | 4.19e-29 | 76 |
immune system | 1.79e-27 | 93 |
bone element | 5.09e-24 | 82 |
skeletal element | 5.10e-24 | 90 |
skeletal system | 1.30e-20 | 100 |
musculoskeletal system | 9.54e-18 | 167 |
lateral plate mesoderm | 3.54e-15 | 203 |
mesoderm | 9.79e-15 | 315 |
mesoderm-derived structure | 9.79e-15 | 315 |
presumptive mesoderm | 9.79e-15 | 315 |
embryonic structure | 1.58e-07 | 564 |
germ layer | 6.02e-07 | 560 |
germ layer / neural crest | 6.02e-07 | 560 |
embryonic tissue | 6.02e-07 | 560 |
presumptive structure | 6.02e-07 | 560 |
germ layer / neural crest derived structure | 6.02e-07 | 560 |
epiblast (generic) | 6.02e-07 | 560 |