FFCP PHASE1:Hg19::chr6:36098264..36098331,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6875 | |||
|TSSclassifier=strong | |||
|UniProt=Q5U4A5 | |||
|association_with_transcript=0bp_to_ENST00000373766_5end | |||
|cluster_id=chr6:36098264..36098331,+ | |||
|description=CAGE_peak_1_at_MAPK13_5end | |||
|id=chr6:36098264..36098331,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.98e-09!43;CL:0000542!1.83e-07!53;CL:0000051!1.83e-07!53;CL:0002368!2.00e-07!13;CL:0000838!2.52e-07!52;CL:0000791!4.01e-07!18;CL:0000789!4.01e-07!18;CL:0002420!4.01e-07!18;CL:0002419!4.01e-07!18;CL:0000790!4.01e-07!18;CL:0000223!8.08e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.17e-08;42!CL:0002368;4.78e-08;13!CL:0000791;1.74e-07;18!CL:0000789;1.74e-07;18!CL:0002419;1.74e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.12e-10,42;CL:0000542,2.01e-08,53;CL:0000051,2.01e-08,53;CL:0000838,2.84e-08,52;CL:0002368,5.05e-08,13;CL:0000223,8.54e-08,58;CL:0000791,1.78e-07,18;CL:0000789,1.78e-07,18;CL:0002420,1.78e-07,18;CL:0002419,1.78e-07,18;CL:0000790,1.78e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.74e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.74e-10!126;UBERON:0000464!2.20e-10!104;UBERON:0004119!8.33e-10!169;UBERON:0000925!8.33e-10!169;UBERON:0006595!8.33e-10!169;UBERON:0001007!4.68e-08!155;UBERON:0001555!4.68e-08!155;UBERON:0007026!4.68e-08!155;UBERON:0005911!2.22e-07!82;UBERON:0004921!6.01e-07!129;UBERON:0004185!6.01e-07!129;UBERON:0000058!7.99e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.84e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.43e-12,160;UBERON:0000925,2.43e-12,160;UBERON:0006595,2.43e-12,160;UBERON:0001007,2.67e-10,145;UBERON:0001555,2.67e-10,145;UBERON:0007026,2.67e-10,145;UBERON:0004921,4.63e-10,118;UBERON:0005911,1.87e-07,82;UBERON:0005178,4.74e-07,34;UBERON:0002224,4.74e-07,34;UBERON:0001004,8.68e-07,74 | |||
|phase1_expression=1.09007027562334,0.642301571672949,1.40954404095971,3.00219895059391,1.34088328328186,0.872338524100369,2.53299878168311,4.42203911398782,0.783556884599516,21.1331185391298,46.0548770861802,1.09220686065086,0.527533956456907,0.618831764800233,1.32558950291166,1.34465029290355,1.20538905604795,2.19093027116212,1.95173119516203,0.123121058076788,1.63200552995402,0,0,0.136874425072884,0.376627918784408,2.44522898393444,3.20192298854788,1.81034797021462,0.786728553697808,3.0706351847777,1.85779347979291,34.9380065301992,49.0965647608548,43.2612191895142,3.09868802321207,0,0,1.10799081706375,2.00544447470142,3.90619567288533,1.79132379391939,3.56283032620878,3.09090681161024,1.45398238779565,0,0.727752183563449,1.16214518452842,0.822335776043652,3.09706370895104,0.28769239232215,0,0.47296445977717,1.03423704220986,0,2.70852973188684,1.50593871634084,1.09162460023138,1.12361742222542,0.612167784741805,0.320929027076094,0,0,0,0,0,0,1.24564449799115,1.00499466102697,0,0.434377689410233,2.42159801053347,0.368277635987565,1.26584954976354,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,14.0796995569058,16.3841583378639,11.5636203002262,9.81479511902967,10.4102956629363,10.9202963591352,12.5598525829124,14.3108063180305,18.7840279806118,8.22132065119314,14.5263826687587,0,2.80254281490768,0,8.06510057466716,13.7553766962208,10.485676448975,17.7217685114119,19.5553359980154,22.2520468695325,19.4826728407911,10.1383515765508,16.4979308185909,21.9318555637785,10.5613506868356,17.2923281629661,15.6071217071854,4.43982342429925,6.35605040907451,2.89803085735052,13.0492175582613,16.0524496853828,17.7710390468461,6.23201384836614,9.58051234004803,9.96519591899627,6.32549230048757,8.91983160107471,11.7195021694155,11.4054245333805,7.37818083481087,7.29523683580185,8.74515085866421,5.91943130110042,8.21127996921047,6.04820229674197,7.75576567772171,7.38604459802275,17.0664806419773,3.35350429851818,0.895037932904712,0.361439152384566,0,0.579386075843295,0,0.486634870302636,1.13441780596881,0.443458794925128,0.702678285545008,11.853606332543,37.8867099824244,41.8986420346405,0.97364218096405,0.696518949197069,3.85578085504709,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0,0,0.208994966536811,1.03366703667732,0.71153252537342,1.00416183829401,0.402829317109147,0,0.976248230192678,0.367663080345869,0.81014194788176,1.25019619597712,1.57170560838319,0.675668882899933,1.53316637465883,0.949265659568129,0.549605231791222,5.27121669744253,7.75560528296651,28.7822074414073,5.96366342034382,0.886413581652058,0.529636723252875,0.286836620748814,1.41867352879343,1.68203280042692,1.06748995729705,0.49333509683432,0.933633106199299,1.61652806483626,2.12500474047496,0.151357427644931,0.576175924479999,4.45210720484214,10.9256026890612,2.2818872861778,3.73621701379503,1.29177948508141,0.647491777472526,1.26405726032024,0.816616685019573,3.80786383666481,1.34323515528495,0,1.23633464639278,3.64064544775211,9.3420358436111,2.35670559535693,1.25118519871964,0,0.877955241761676,0.919463387397059,1.20190447125277,0.907457465280168,0.358779271377724,0.427114777637135,0.423863802319124,0,0.309157587715317,0,0.930584281657949,0.337552664482532,0.292311015483596,0,0.552299391853796,1.45481451136931,0.355009592516614,0.403008392910561,0.339121184620975,25.8969543238818,16.0920211148592,18.0686895095072,1.82960559194393,1.72288698817931,2.5562667431294,3.10983165046111,2.27088765788066,1.09493207722749,3.12899064659632,0,4.14404764057442,0,2.88751792667834,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,2.4694440679884,4.41026134156626,3.80265104465493,0,1.77236972004421,0,14.8816010637167,2.23038153388083,6.58501712451753,14.6122279234905,15.0793458617446,16.6659201285353,3.9096996637239,8.31947828223663,4.3299402607582,1.39116485970092,0.469634776943287,0.144366447761074,0,1.14152491340759,1.58040879591855,1.71697232418975,4.18568910348575,8.65815781015179,6.53977114070404,7.49870671894216,3.69560682037491,17.2965618635711,2.23896306757121,2.03443756959773,8.43441894163465,0,0,0.414656231081544,0,1.00993946741104,0,0.763976851116555,0,1.71072446022705,0,4.50514586765876,0,1.00917975910825,0.43596006883328,0.8800594298514,0.646358578788889,0,3.381211010224,2.92531928243358,0,1.80045161983499,5.67396528093113,4.79559922228979,0.285955987316295,2.17048642156577,4.11620168390384,2.28015329005615,1.06617584622764,9.50342247520115,2.41151501647669,4.35766729300147,3.29910870900788,8.51366464488333,5.52482800575339,8.43335757932127,0.239624855491583,0,0,1.15825045334063,1.64381058040307,0.537182889719687,5.94051263165695,4.53170748464433,7.54696512008311,7.44389610422541,0,0,0,0.335032530668698,0,1.49801404789436,5.9832291840805,4.55857064779639,0.24538298343828,4.00136416847742,1.89885516589815,0.415941723061614,0,0.788512075169673,0.35142424497814,0,0,0,0.664225598535437,0.737476674166813,1.21637060255316,0.587403472388222,0,5.58273670531796,5.60856922128404,5.87001567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| |||
|short_description=p1@MAPK13 | |||
}} |
Latest revision as of 11:58, 18 September 2015
Short description: | p1@MAPK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAPK13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373766_5end |
EntrezGene: | MAPK13 |
HGNC: | 6875 |
UniProt: | Q5U4A5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.12e-10 | 42 |
lymphocyte | 2.01e-08 | 53 |
common lymphoid progenitor | 2.01e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.84e-08 | 52 |
respiratory epithelial cell | 5.05e-08 | 13 |
endodermal cell | 8.54e-08 | 58 |
mature alpha-beta T cell | 1.78e-07 | 18 |
alpha-beta T cell | 1.78e-07 | 18 |
immature T cell | 1.78e-07 | 18 |
mature T cell | 1.78e-07 | 18 |
immature alpha-beta T cell | 1.78e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.43e-12 | 160 |
endoderm | 2.43e-12 | 160 |
presumptive endoderm | 2.43e-12 | 160 |
digestive system | 2.67e-10 | 145 |
digestive tract | 2.67e-10 | 145 |
primitive gut | 2.67e-10 | 145 |
subdivision of digestive tract | 4.63e-10 | 118 |
endo-epithelium | 1.87e-07 | 82 |
thoracic cavity element | 4.74e-07 | 34 |
thoracic cavity | 4.74e-07 | 34 |
respiratory system | 8.68e-07 | 74 |