FFCP PHASE1:Hg19::chr6:36095525..36095559,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:36095525..36095559,+ to FFCP PHASE1:Hg19::chr6:36095525..36095559,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5603 | |EntrezGene=5603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6875 | |HGNC=6875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000476951_5end | |||
|cluster_id=chr6:36095525..36095559,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_MAPK13_5end | |||
|id=chr6:36095525..36095559,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.95e-33!76;CL:0002194!1.03e-29!63;CL:0000576!1.03e-29!63;CL:0000040!1.03e-29!63;CL:0000559!1.03e-29!63;CL:0002009!6.26e-28!65;CL:0000839!2.11e-25!70;CL:0000557!1.19e-24!71;CL:0000860!4.53e-24!45;CL:0002057!5.20e-24!42;CL:0000048!1.53e-19!430;CL:0000763!6.00e-19!112;CL:0000049!6.00e-19!112;CL:0000134!1.74e-18!358;CL:0000723!2.96e-18!436;CL:0000034!9.99e-18!444;CL:0002320!6.28e-17!365;CL:0000219!1.63e-14!390;CL:0000738!7.44e-13!140;CL:0002087!8.16e-11!119;CL:0000037!8.92e-09!172;CL:0000566!8.92e-09!172;CL:0002031!2.83e-08!124;CL:0000094!7.49e-08!8;CL:0002032!7.66e-08!165;CL:0000837!7.66e-08!165;CL:0000988!6.67e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.70e-41;33!CL:0002057;8.70e-41;33!CL:0000473;2.29e-40;39!CL:0000234;2.29e-40;39!CL:0000576;2.06e-26;48!CL:0000766;8.86e-23;69!CL:0000094;1.98e-13;8!CL:0000763;9.85e-11;100!CL:0000235;1.92e-09;6!CL:0000081;3.48e-09;11!CL:0000738;2.29e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.19e-56,72;CL:0002194,2.28e-50,59;CL:0000576,2.28e-50,59;CL:0000040,2.28e-50,59;CL:0000559,2.28e-50,59;CL:0002009,3.57e-48,61;CL:0000473,4.33e-48,48;CL:0000234,4.33e-48,48;CL:0000839,2.87e-43,66;CL:0000557,2.24e-42,67;CL:0000860,4.61e-40,42;CL:0002057,4.61e-40,42;CL:0000763,1.58e-32,108;CL:0000049,1.58e-32,108;CL:0000738,2.51e-25,136;CL:0002087,2.91e-21,115;CL:0000037,1.20e-17,168;CL:0002031,1.07e-16,120;CL:0002032,7.36e-16,161;CL:0000837,7.36e-16,161;CL:0000988,7.96e-16,177;CL:0000134,8.77e-16,354;CL:0002320,5.88e-15,361;CL:0000094,2.05e-13,8;CL:0000219,3.26e-13,386;CL:0000048,2.11e-12,427;CL:0000034,4.31e-12,441;CL:0000723,7.59e-12,433;CL:0000235,1.91e-09,6;CL:0000081,3.57e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-29;42!CL:0000049;5.33e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.11e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.65e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-24!102;UBERON:0003061!1.22e-24!102;UBERON:0002193!9.86e-24!112;UBERON:0002371!1.03e-22!80;UBERON:0002405!2.90e-19!115;UBERON:0001474!3.42e-19!86;UBERON:0002384!2.69e-17!375;UBERON:0004765!6.66e-17!101;UBERON:0001434!6.66e-17!101;UBERON:0002204!2.19e-15!167;UBERON:0003081!2.09e-12!216;UBERON:0000926!7.95e-09!448;UBERON:0004120!7.95e-09!448;UBERON:0006603!7.95e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.04e-10;15!UBERON:0000179;2.04e-10;15!UBERON:0000463;2.04e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.47e-42,98;UBERON:0003061,4.47e-42,98;UBERON:0002193,1.10e-37,108;UBERON:0002371,4.86e-37,76;UBERON:0001474,4.10e-33,82;UBERON:0004765,1.04e-28,90;UBERON:0002405,1.61e-28,93;UBERON:0001434,3.17e-24,100;UBERON:0003081,7.80e-23,203;UBERON:0000926,2.24e-16,315;UBERON:0004120,2.24e-16,315;UBERON:0006603,2.24e-16,315;UBERON:0002384,1.42e-15,371;UBERON:0002204,5.00e-15,167;UBERON:0000178,2.20e-10,15;UBERON:0000179,2.20e-10,15;UBERON:0000463,2.20e-10,15 | |||
|phase1_expression=0.726713517082227,0,0.281908808191942,1.0007329835313,0,0,0,2.52687949370732,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1753137183299,12.666370137208,20.435728277722,0,0,0,0,0,0,33.2397245119126,33.4909227275137,20.8330435887218,2.91090116511902,3.56283032620878,3.8636335145128,22.8275234883917,23.806184452395,19.8918930174009,44.3939460489858,42.3502924662481,64.7286315170766,27.3307772706043,24.0791064137355,24.1211874486357,40.679990326921,40.0200503821972,54.1705946377367,40.8485876807452,38.4797671581563,26.2926476800749,62.1350301512932,42.6835606011204,51.7863071897223,5.27762080298746,10.7710375115681,10.2293940127847,81.5487960546321,56.738522469114,59.7909359035752,26.1298611867013,31.8104580236323,29.9720605693061,20.5835830895345,44.5615939544953,32.2791635189702,0.211255286311942,0.212604299965044,0.628975936525128,1.12328631146495,1.20141514273205,0.48217676009124,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0.267440195783507,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.327447688744282,0,0,3.57002133020152,3.13433527138681,6.24902414438666,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,222.708905466947,294.713000752727,0,1.98788780678127,0.633152558322899,2.91300197789081,1.72101972449288,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.653847612453835,0.151357427644931,0,0.234321431833797,1.87296046098192,0,0.597794722207204,0.23486899728753,0.161872944368132,0,1.42907919878425,0.737005903870608,0.103325781175765,0,0,0,1.43723628363248,0.505008341862199,0.250237039743928,0.831192346452549,0,0.30648779579902,0.751190294532984,0.226864366320042,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,1.06502877754984,0.10075209822764,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,25.6065686330893,11.9342175221011,19.1734199352459,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.901029173531752,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,2.60588947434988,0,0,1.80863626235752,0,1.59956785891291,8.51366464488333,14.0631985600995,18.9750545534728,0,0,0,0.289562613335158,1.2328579353023,0,0,0.788123040807709,0,0.77005821767849,0,0,0,0,0,59.1715548918274,59.832291840805,99.8741387380845,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,2.06768026122887,16.3942792622149,4.37582986994122,0,0,0,0.248107807818777,3.52962538562544,0.841980283299221,0.384417447767103,0,0.482561763430822,0,1.07946785661859,1.06537035187876,1.39616165223476,1.55776328755086,0.348631135379878,0.120859449591622,0.200506470303285,0.184161977871793,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0,0,0,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.9273691048295,0,0,0,0,1.6068392984416,0.290012154876366,0.462145851343933,1.22802939780904,0.413509717453592,0.214840489736547,0.725083469571143,0.511359764496605,0,0.330569830721956,0,1.53135254993501,0.2023155617111,0,4.7221852024596,0,1.54016790088044,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0,0.511795582622668,0,0,0,0.179872457583315,0,0.235624804691373,0.606547444719948,0,1.68503382495592,0,0.243713489631284,2.11300293513511,0.272999822815972,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0.422215270595328,0,0.75894634753143,0,0.0962221127255121,0.670302275535787,0,1.12972560932135,0,0,0,0,7.61171413848254,16.0573813499899,13.6715324921799,9.52927101831156,13.1635927387582,25.290459136516,11.8806916192385,9.51750211553125,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,1.17206543417515,0,0,0,0,0.890894042497916,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0,0,0.359473404589307,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,3.87402989879804,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0.676786981851542,0.784250137270958,1.00692952185506,0.189753732724185,0,3.16497096792041,0.489698424477443,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,1.32930774541437,0,0.627865836814451,0,2.56148591426813,1.1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| ||
|short_description=p2@MAPK13 | |||
}} | }} |
Latest revision as of 11:56, 18 September 2015
Short description: | p2@MAPK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAPK13_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -26bp_to_ENST00000476951_5end |
EntrezGene: | MAPK13 |
HGNC: | 6875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.19e-56 | 72 |
monopoietic cell | 2.28e-50 | 59 |
monocyte | 2.28e-50 | 59 |
monoblast | 2.28e-50 | 59 |
promonocyte | 2.28e-50 | 59 |
macrophage dendritic cell progenitor | 3.57e-48 | 61 |
defensive cell | 4.33e-48 | 48 |
phagocyte | 4.33e-48 | 48 |
myeloid lineage restricted progenitor cell | 2.87e-43 | 66 |
granulocyte monocyte progenitor cell | 2.24e-42 | 67 |
classical monocyte | 4.61e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.61e-40 | 42 |
myeloid cell | 1.58e-32 | 108 |
common myeloid progenitor | 1.58e-32 | 108 |
leukocyte | 2.51e-25 | 136 |
nongranular leukocyte | 2.91e-21 | 115 |
hematopoietic stem cell | 1.20e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 1.07e-16 | 120 |
hematopoietic oligopotent progenitor cell | 7.36e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.36e-16 | 161 |
hematopoietic cell | 7.96e-16 | 177 |
mesenchymal cell | 8.77e-16 | 354 |
connective tissue cell | 5.88e-15 | 361 |
granulocyte | 2.05e-13 | 8 |
motile cell | 3.26e-13 | 386 |
multi fate stem cell | 2.11e-12 | 427 |
stem cell | 4.31e-12 | 441 |
somatic stem cell | 7.59e-12 | 433 |
macrophage | 1.91e-09 | 6 |
blood cell | 3.57e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.47e-42 | 98 |
blood island | 4.47e-42 | 98 |
hemolymphoid system | 1.10e-37 | 108 |
bone marrow | 4.86e-37 | 76 |
bone element | 4.10e-33 | 82 |
skeletal element | 1.04e-28 | 90 |
immune system | 1.61e-28 | 93 |
skeletal system | 3.17e-24 | 100 |
lateral plate mesoderm | 7.80e-23 | 203 |
mesoderm | 2.24e-16 | 315 |
mesoderm-derived structure | 2.24e-16 | 315 |
presumptive mesoderm | 2.24e-16 | 315 |
connective tissue | 1.42e-15 | 371 |
musculoskeletal system | 5.00e-15 | 167 |
blood | 2.20e-10 | 15 |
haemolymphatic fluid | 2.20e-10 | 15 |
organism substance | 2.20e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.65e-07 | 14 |