FFCP PHASE1:Hg19::chr1:167906241..167906264,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25874 | |EntrezGene=25874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24515 | |HGNC=24515 | ||
|TSSclassifier=strong | |||
|UniProt=O95563 | |UniProt=O95563 | ||
|association_with_transcript=13bp_to_ENST00000271373,uc001get.2_5end | |association_with_transcript=13bp_to_ENST00000271373,uc001get.2_5end | ||
|cluster_id=chr1:167906241..167906264,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_BRP44_5end | |description=CAGE_peak_9_at_BRP44_5end | ||
|id=chr1:167906241..167906264,- | |id=chr1:167906241..167906264,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.93e-26;1!UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | |||
|ontology_enrichment_disease=DOID:0060058!3.18e-10!10;DOID:2531!4.99e-08!51;DOID:0060083!4.99e-08!51;DOID:14566!7.32e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-13,8;UBERON:0003135,4.03e-10,11 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0.534893840235659,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.697204805222715,0.568676929949686,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,12.2465435590361,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.561320188866147,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.546273504020151,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.541892875087706,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0,1.39453664789186,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0.185803175125719,0.432807638929335,0.142283686696828,0.478278818186467,0,0.191505370132367,0,0.324621940274555,0,0,0.156679895773023,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0,0.23874448473769,0,0,0,0.140669416410513,0,0.329607748453519,0.211125408127993,0,0,0,0,0.246169610922139,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,4.08773192782946,0,0.332423363800313,0.451191321234361,0,0.839107934879214,0.189753732724185,0.158936578980379,0.421996129056054,0.163232808159148,0,0,0.995261931078505,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0.387025325156341,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0.407712618220842,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0.254019996197353,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0.449947783103001,0,0,0.335434687599266,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0.592834895693833,1.09613338542806,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0.353378291891762,0,0.675769762612291,0.512483037175893,0,0,0,0,0,0.490696182767533,0,0.245772908753719,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.131545547125698,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.11294608203896,0.109940516745429,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.399764623699716,0.178553938605658,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0.380095503034311,0.101988829741982,0,0,0.250707539292375,21.1422568028888,35.9071934409279,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0.534893840235659,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.697204805222715,0.568676929949686,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,12.2465435590361,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.561320188866147,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.546273504020151,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.541892875087706,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0,1.39453664789186,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0.185803175125719,0.432807638929335,0.142283686696828,0.478278818186467,0,0.191505370132367,0,0.324621940274555,0,0,0.156679895773023,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0,0.23874448473769,0,0,0,0.140669416410513,0,0.329607748453519,0.211125408127993,0,0,0,0,0.246169610922139,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,4.08773192782946,0,0.332423363800313,0.451191321234361,0,0.839107934879214,0.189753732724185,0.158936578980379,0.421996129056054,0.163232808159148,0,0,0.995261931078505,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0.387025325156341,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0.407712618220842,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0.254019996197353,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0.449947783103001,0,0,0.335434687599266,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0.592834895693833,1.09613338542806,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0.353378291891762,0,0.675769762612291,0.512483037175893,0,0,0,0,0,0.490696182767533,0,0.245772908753719,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.131545547125698,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.11294608203896,0.109940516745429,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.399764623699716,0.178553938605658,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0.380095503034311,0.101988829741982,0,0,0.250707539292375,21.1422568028888,35.9071934409279,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | ||
|short_description=p9@BRP44 | |short_description=p9@BRP44 | ||
}} | }} |
Latest revision as of 11:55, 18 September 2015
Short description: | p9@BRP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BRP44_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 13bp_to_ENST00000271373, uc001get.2_5end |
EntrezGene: | BRP44 |
HGNC: | 24515 |
UniProt: | O95563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-13 | 8 |
male reproductive organ | 4.03e-10 | 11 |