FFCP PHASE1:Hg19::chr15:63353097..63353109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-323bp_to_ENST00000561242_5end | |association_with_transcript=-323bp_to_ENST00000561242_5end | ||
|cluster_id=chr15:63353097..63353109,+ | |||
|coexpression_cluster_id=C336 | |||
|description=CAGE_peak_16_at_TPM1_5end | |description=CAGE_peak_16_at_TPM1_5end | ||
|id=chr15:63353097..63353109,+ | |id=chr15:63353097..63353109,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.46e-13!32;CL:0000055!4.62e-11!180;CL:0000192!1.07e-09!42;CL:0000514!1.07e-09!42 | |ontology_enrichment_celltype=CL:0000359!1.46e-13!32;CL:0000055!4.62e-11!180;CL:0000192!1.07e-09!42;CL:0000514!1.07e-09!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.91e-07;32!CL:0002594;5.21e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.20e-08,32;CL:0002594,5.58e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.68e-11;4!UBERON:0007284;1.68e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.74e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.13e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.91e-11!42;UBERON:0003509!1.91e-11!42;UBERON:0004572!1.91e-11!42;UBERON:0004872!3.39e-11!84;UBERON:0001981!5.91e-10!60;UBERON:0007500!5.91e-10!60;UBERON:0004537!5.91e-10!60;UBERON:0006965!5.91e-10!60;UBERON:0003914!1.16e-09!118;UBERON:0002100!3.81e-09!216;UBERON:0001009!4.29e-09!113;UBERON:0002385!4.33e-09!63;UBERON:0001015!4.33e-09!63;UBERON:0000383!4.33e-09!63;UBERON:0002049!7.05e-09!79;UBERON:0007798!7.05e-09!79;UBERON:0004573!1.81e-08!33;UBERON:0004571!1.81e-08!33;UBERON:0001134!2.46e-08!61;UBERON:0002036!2.46e-08!61;UBERON:0003082!2.46e-08!61;UBERON:0005256!2.98e-08!143;UBERON:0000914!3.40e-08!83;UBERON:0002329!3.40e-08!83;UBERON:0003077!3.40e-08!83;UBERON:0003059!3.40e-08!83;UBERON:0007282!3.40e-08!83;UBERON:0009618!3.40e-08!83;UBERON:0007285!3.40e-08!83;UBERON:0000481!4.10e-08!347;UBERON:0007100!7.57e-08!27;UBERON:0004535!8.56e-08!110;UBERON:0003104!9.92e-08!238;UBERON:0009142!9.92e-08!238;UBERON:0000055!1.96e-07!69;UBERON:0000468!1.96e-07!659;UBERON:0000475!2.96e-07!365;UBERON:0004290!3.81e-07!70;UBERON:0000477!5.37e-07!286 | |ontology_enrichment_uberon=UBERON:0001637!1.91e-11!42;UBERON:0003509!1.91e-11!42;UBERON:0004572!1.91e-11!42;UBERON:0004872!3.39e-11!84;UBERON:0001981!5.91e-10!60;UBERON:0007500!5.91e-10!60;UBERON:0004537!5.91e-10!60;UBERON:0006965!5.91e-10!60;UBERON:0003914!1.16e-09!118;UBERON:0002100!3.81e-09!216;UBERON:0001009!4.29e-09!113;UBERON:0002385!4.33e-09!63;UBERON:0001015!4.33e-09!63;UBERON:0000383!4.33e-09!63;UBERON:0002049!7.05e-09!79;UBERON:0007798!7.05e-09!79;UBERON:0004573!1.81e-08!33;UBERON:0004571!1.81e-08!33;UBERON:0001134!2.46e-08!61;UBERON:0002036!2.46e-08!61;UBERON:0003082!2.46e-08!61;UBERON:0005256!2.98e-08!143;UBERON:0000914!3.40e-08!83;UBERON:0002329!3.40e-08!83;UBERON:0003077!3.40e-08!83;UBERON:0003059!3.40e-08!83;UBERON:0007282!3.40e-08!83;UBERON:0009618!3.40e-08!83;UBERON:0007285!3.40e-08!83;UBERON:0000481!4.10e-08!347;UBERON:0007100!7.57e-08!27;UBERON:0004535!8.56e-08!110;UBERON:0003104!9.92e-08!238;UBERON:0009142!9.92e-08!238;UBERON:0000055!1.96e-07!69;UBERON:0000468!1.96e-07!659;UBERON:0000475!2.96e-07!365;UBERON:0004290!3.81e-07!70;UBERON:0000477!5.37e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.32e-10;3!UBERON:0007100;8.20e-10;25!UBERON:0003978;2.30e-09;3!UBERON:0000946;2.30e-09;3!UBERON:0003688;3.85e-07;6!UBERON:0002358;3.85e-07;6!UBERON:0003684;3.85e-07;6!UBERON:0001178;3.85e-07;6!UBERON:0002081;3.97e-07;2!UBERON:0001310;5.21e-07;4!UBERON:0002133;7.42e-07;2!UBERON:0005090;9.41e-07;2!UBERON:0001630;9.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.21e-10,27;UBERON:0004151,6.40e-10,3;UBERON:0003978,2.40e-09,3;UBERON:0009751,2.40e-09,3;UBERON:0000946,2.40e-09,3;UBERON:0002523,2.40e-09,3;UBERON:0005983,2.40e-09,3;UBERON:0002165,2.40e-09,3;UBERON:0002062,2.40e-09,3;UBERON:0007280,2.40e-09,3;UBERON:0003103,1.79e-07,68;UBERON:0004872,3.28e-07,83;UBERON:0002081,4.00e-07,2;UBERON:0010227,4.00e-07,2;UBERON:0001310,5.58e-07,4;UBERON:0003688,5.72e-07,6;UBERON:0002358,5.72e-07,6;UBERON:0003684,5.72e-07,6;UBERON:0001178,5.72e-07,6;UBERON:0002385,7.11e-07,64;UBERON:0001015,7.11e-07,64;UBERON:0000383,7.11e-07,64;UBERON:0005090,8.36e-07,2;UBERON:0001630,8.36e-07,2;UBERON:0002133,8.36e-07,2 | |||
|phase1_expression=0.908391896352783,2.14100523890983,0.563817616383885,1.0007329835313,1.78784437770915,1.74467704820074,0,0,0,0.737201809504527,0,0.218441372130172,0.263766978228454,0.123766352960047,0,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.724232594804119,0,0,0,0.886917589850256,0.87834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0.735326160691737,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,1.49091585508596,0.25326102332916,0.132409180813219,0.286836620748814,0,5.60677600142307,4.2699598291882,0.74000264525148,0.311211035399766,0.404132016209064,0,0,0.576175924479999,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.877955241761676,1.5324389789951,0.45071417671979,0.113432183160021,0.358779271377724,0.640672166455702,0,0.300091096084402,0.206105058476878,1.03056216018252,0.18611685633159,0.506328996723799,0.876933046450788,0.252433774244115,0,0.484938170456436,1.06502877754984,1.41052937518696,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0,0.217879444092406,0.474541238222193,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,1.19967589418468,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.535286966391485,0.630809660135739,0.35142424497814,0,0,0,0,1.29058417979192,0.0868836144680828,0,0,0.206768026122887,0,0,0,4.99306318531491,0,0.744323423456331,0.767309866440312,3.08726103876381,1.02511319404561,3.58195074346692,0.482561763430822,0,0.308419387605311,0.532685175939381,0,0,0.232420756919918,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.546273504020151,0.131124414959424,0,0.231046011313244,0,0,1.05551628892876,1.13733384070897,0,0.863663664408557,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0.522870902049801,0,0.328014645699706,0,0,0.366277859273374,0,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0.6970372701606,0,0,0,1.11194531462352,2.43312307461385,0.744316738719335,0.949138274156178,0.38126038784765,0,0,0.636406495851874,2.35484592059769,0,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.731140468893853,4.22600587027022,0.272999822815972,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0,0,7.30477357065735,1.239293992399,0.281695602532241,0.143411352204052,0.294747123039363,7.133421029625,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0,0.597743964753209,1.93398740871803,0,0,0,1.86623752597084,0,0,0,12.8236427328014,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0.269272933229316,0.54323685961004,0.31900115973192,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.265372693510018,0.611030144933625,0,0.123563938946503,0,0.134802265961354,3.21031058919516,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.520679215005393,0,0,0.52418000472609,0.171986032471617,0,0,0,13.2874952589135,0,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,2.23425921017803,2.52076466412852,6.46085722119133,2.39614800598789,5.15071257763885,39.0550050523277,0.335917362433631,3.96329871896644,0,0.236349546921671,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,26.4437270758146,107.2588991992,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0,0.13223260174269,0,0,0.320362237703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| ||
|short_description=p16@TPM1 | |short_description=p16@TPM1 | ||
}} | }} |
Latest revision as of 11:45, 18 September 2015
Short description: | p16@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TPM1_5end |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | -323bp_to_ENST00000561242_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.20e-08 | 32 |
smooth muscle cell of the umbilical artery | 5.58e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.21e-10 | 27 |
cardiac chamber | 6.40e-10 | 3 |
valve | 2.40e-09 | 3 |
cardiac mesenchyme | 2.40e-09 | 3 |
cardial valve | 2.40e-09 | 3 |
tunica intima | 2.40e-09 | 3 |
heart layer | 2.40e-09 | 3 |
endocardium | 2.40e-09 | 3 |
endocardial cushion | 2.40e-09 | 3 |
presumptive endocardium | 2.40e-09 | 3 |
compound organ | 1.79e-07 | 68 |
splanchnic layer of lateral plate mesoderm | 3.28e-07 | 83 |
cardiac atrium | 4.00e-07 | 2 |
future cardiac atrium | 4.00e-07 | 2 |
umbilical artery | 5.58e-07 | 4 |
omentum | 5.72e-07 | 6 |
peritoneum | 5.72e-07 | 6 |
abdominal cavity | 5.72e-07 | 6 |
visceral peritoneum | 5.72e-07 | 6 |
muscle tissue | 7.11e-07 | 64 |
musculature | 7.11e-07 | 64 |
musculature of body | 7.11e-07 | 64 |
muscle structure | 8.36e-07 | 2 |
muscle organ | 8.36e-07 | 2 |
atrioventricular valve | 8.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.13e-07 | 2 |