FFCP PHASE1:Hg19::chr2:74734473..74734498,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:74734473..74734498,- to FFCP PHASE1:Hg19::chr2:74734473..74734498,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84759 | |EntrezGene=84759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17615 | |HGNC=17615 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002sly.2_5end | |||
|cluster_id=chr2:74734473..74734498,- | |||
|description=CAGE_peak_3_at_PCGF1_5end | |||
|id=chr2:74734473..74734498,- | |||
|ontology_enrichment_celltype=CL:0000055!2.92e-16!180;CL:0000057!3.81e-09!75;CL:0000220!1.33e-08!246;CL:0000680!1.95e-08!57;CL:0000056!1.95e-08!57;CL:0000355!1.95e-08!57;CL:0000183!2.29e-08!59;CL:0002321!3.29e-08!248;CL:0000187!1.96e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.80e-08,76;CL:0000680,2.02e-07,58;CL:0000056,2.02e-07,58;CL:0000355,2.02e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.87e-12!82;UBERON:0002100!8.20e-11!216;UBERON:0000475!2.75e-10!365;UBERON:0004290!4.52e-09!70;UBERON:0000914!1.48e-08!83;UBERON:0002329!1.48e-08!83;UBERON:0003077!1.48e-08!83;UBERON:0003059!1.48e-08!83;UBERON:0007282!1.48e-08!83;UBERON:0009618!1.48e-08!83;UBERON:0007285!1.48e-08!83;UBERON:0001134!1.09e-07!61;UBERON:0002036!1.09e-07!61;UBERON:0003082!1.09e-07!61;UBERON:0003104!1.20e-07!238;UBERON:0009142!1.20e-07!238;UBERON:0002385!5.64e-07!63;UBERON:0001015!5.64e-07!63;UBERON:0000383!5.64e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.23e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.16e-11,83;UBERON:0002100,1.38e-09,199;UBERON:0002329,3.43e-08,71;UBERON:0003059,3.43e-08,71;UBERON:0007282,3.43e-08,71;UBERON:0004290,3.43e-08,71;UBERON:0009618,3.43e-08,71;UBERON:0003077,7.31e-08,72;UBERON:0007285,7.31e-08,72;UBERON:0001013,1.33e-07,14;UBERON:0007524,1.51e-07,73;UBERON:0007503,1.95e-07,78;UBERON:0003102,4.97e-07,99;UBERON:0003104,7.09e-07,160;UBERON:0009142,7.09e-07,160;UBERON:0002199,8.15e-07,46;UBERON:0002416,8.15e-07,46;UBERON:0001134,9.28e-07,62;UBERON:0002036,9.28e-07,62;UBERON:0003082,9.28e-07,62;UBERON:0005256,9.80e-07,122 | |||
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| ||
|short_description=p3@PCGF1 | |||
}} | }} |
Latest revision as of 11:31, 18 September 2015
Short description: | p3@PCGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCGF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002sly.2_5end |
EntrezGene: | PCGF1 |
HGNC: | 17615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.80e-08 | 76 |
muscle precursor cell | 2.02e-07 | 58 |
myoblast | 2.02e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.16e-11 | 83 |
trunk | 1.38e-09 | 199 |
somite | 3.43e-08 | 71 |
presomitic mesoderm | 3.43e-08 | 71 |
presumptive segmental plate | 3.43e-08 | 71 |
dermomyotome | 3.43e-08 | 71 |
trunk paraxial mesoderm | 3.43e-08 | 71 |
paraxial mesoderm | 7.31e-08 | 72 |
presumptive paraxial mesoderm | 7.31e-08 | 72 |
adipose tissue | 1.33e-07 | 14 |
dense mesenchyme tissue | 1.51e-07 | 73 |
epithelial vesicle | 1.95e-07 | 78 |
surface structure | 4.97e-07 | 99 |
mesenchyme | 7.09e-07 | 160 |
entire embryonic mesenchyme | 7.09e-07 | 160 |
integument | 8.15e-07 | 46 |
integumental system | 8.15e-07 | 46 |
skeletal muscle tissue | 9.28e-07 | 62 |
striated muscle tissue | 9.28e-07 | 62 |
myotome | 9.28e-07 | 62 |
trunk mesenchyme | 9.80e-07 | 122 |