FFCP PHASE1:Hg19::chr4:71570430..71570536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22902 | |EntrezGene=22902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30285 | |HGNC=30285 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000417478_5end | |association_with_transcript=0bp_to_ENST00000417478_5end | ||
|cluster_id=chr4:71570430..71570536,+ | |||
|description=CAGE_peak_2_at_RUFY3_5end | |description=CAGE_peak_2_at_RUFY3_5end | ||
|id=chr4:71570430..71570536,+ | |id=chr4:71570430..71570536,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.41e-15!42;CL:0000557!1.61e-12!71;CL:0000860!4.15e-12!45;CL:0002009!2.78e-11!65;CL:0002194!7.83e-11!63;CL:0000576!7.83e-11!63;CL:0000040!7.83e-11!63;CL:0000559!7.83e-11!63;CL:0000839!3.86e-10!70;CL:0000738!1.16e-08!140;CL:0000766!1.59e-08!76;CL:0002087!1.55e-07!119;CL:0000451!1.92e-07!10;CL:0000763!9.21e-07!112;CL:0000049!9.21e-07!112 | |ontology_enrichment_celltype=CL:0002057!6.41e-15!42;CL:0000557!1.61e-12!71;CL:0000860!4.15e-12!45;CL:0002009!2.78e-11!65;CL:0002194!7.83e-11!63;CL:0000576!7.83e-11!63;CL:0000040!7.83e-11!63;CL:0000559!7.83e-11!63;CL:0000839!3.86e-10!70;CL:0000738!1.16e-08!140;CL:0000766!1.59e-08!76;CL:0002087!1.55e-07!119;CL:0000451!1.92e-07!10;CL:0000763!9.21e-07!112;CL:0000049!9.21e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.05e-10;33!CL:0002057;6.05e-10;33!CL:0000576;9.77e-09;48!CL:0000473;6.87e-08;39!CL:0000234;6.87e-08;39!CL:0000451;1.65e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.41e-15,42;CL:0002057,6.41e-15,42;CL:0000557,9.78e-15,67;CL:0002009,1.79e-13,61;CL:0000473,2.55e-13,48;CL:0000234,2.55e-13,48;CL:0002194,5.25e-13,59;CL:0000576,5.25e-13,59;CL:0000040,5.25e-13,59;CL:0000559,5.25e-13,59;CL:0000839,4.63e-12,66;CL:0000766,3.86e-10,72;CL:0000738,8.74e-10,136;CL:0002087,1.15e-08,115;CL:0000763,7.77e-08,108;CL:0000049,7.77e-08,108;CL:0002031,9.96e-08,120;CL:0000451,1.92e-07,10;CL:0000037,3.11e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;6.12e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-10!115;UBERON:0001474!1.18e-09!86;UBERON:0002371!2.41e-09!80;UBERON:0002390!1.75e-08!102;UBERON:0003061!1.75e-08!102;UBERON:0002405!3.51e-08!115;UBERON:0002193!4.51e-08!112;UBERON:0004765!6.82e-07!101;UBERON:0001434!6.82e-07!101 | |ontology_enrichment_uberon=UBERON:0007023!4.43e-10!115;UBERON:0001474!1.18e-09!86;UBERON:0002371!2.41e-09!80;UBERON:0002390!1.75e-08!102;UBERON:0003061!1.75e-08!102;UBERON:0002405!3.51e-08!115;UBERON:0002193!4.51e-08!112;UBERON:0004765!6.82e-07!101;UBERON:0001434!6.82e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.77e-11,82;UBERON:0002371,5.13e-11,76;UBERON:0002405,9.82e-11,93;UBERON:0007023,5.68e-10,114;UBERON:0002390,8.00e-10,98;UBERON:0003061,8.00e-10,98;UBERON:0002193,2.70e-09,108;UBERON:0004765,4.37e-09,90;UBERON:0001434,3.40e-07,100;UBERON:0001016,8.35e-07,89 | |||
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02,4.17300684576278,8.9268222297789,2.54216797555244,11.7833465769755,10.4591967422283,5.59466906829965,6.48406877193477,13.2862451552462,18.3606647712302,5.61813712153784,8.07641481175311,4.00679858848552,2.98989253361951,2.71967400412066,4.58991979363448,5.77901179803038,10.2071449080664,17.9346046348511,65.1507599141559,9.0250742698191,4.73197237702766,13.6848376623405,14.2079462887244,40.2008893763016,7.58780201896166,6.43839072204856,6.02562935093056,11.8242911576638,7.56629755439048,26.7940683913144,9.13884914763794,7.58225897106731,6.2685295784392,9.54746570693063,6.77386656526276,12.7236750369489,19.2046802617322,12.8602518772015,9.07760281541743,8.3088067605837,8.09906009585402,29.4044742732021,7.04694857233086,1.67717343799633,16.6280042401308,22.7652912505892,4.64641480685389,2.51002275065983,3.64638874906946,11.4351252219739,5.95882773328889,10.6792785814995,4.3439968140297,1.72844298240254,5.22539776175055,10.7757172406239,5.58229141095505,11.4159974596233,4.19254738624465,15.0948800688425,13.2506888912221,14.7382570252168,16.9257730230643,6.33021300172019,7.04815022316672,18.5810097867789,25.4670974261459,14.0841278818046,10.419486458051,4.74267916555066,18.1470971587535,9.57511886655273,19.5846409213011,18.3003622636571,18.3807346058077,22.2953388882667,15.0771932400225,7.97461361970287,8.66386480803938,10.1404653872265,10.3213655224213,15.0863510090119,11.177352529449,15.2183498429854,6.49898121402954,8.03740322970734,10.2767520076188,6.35217713185063,4.21501415226193,7.24605143054126,5.82093731258809,9.81595901358343,5.54805861502613,9.09134425320428,3.27038272278348,4.44905610798268,7.09404212030463,6.80539156934576,5.90661362214566,7.3927574994817,5.25679331640218,8.99606224327209,8.69472558507053,7.4647117411354,7.17772629306586,6.26094074174081,8.41442610384423,8.3777146677135,4.88244879845594,5.8191570944819,6.98168620776175,12.0648777568408,7.96191777397232,4.40030541129469,6.18112269329027,5.72474130902062,6.30924491143255,8.86051219873595,7.29101410674747,4.95889154733902,4.0807066592209,3.47283711485751,8.07631124871343,4.11904334487421,1.23520578864389,4.16639694199544,5.83074181621407,3.66536672714738,2.19625172848994,2.30617366729152,3.45430341731199,4.25403938648335,10.9224164559867,43.4538488711836,55.1389087300457,75.7307775404559,5.89697727923543,5.16123108382811,12.2561031548004,7.79950843834227,4.26766918776564,0.172214979660816,9.64777121063621,6.25960230856258,13.2885532333472,10.5753134205605,12.5336483877579,18.8693419944193,8.02056303465072,22.9340240203229,5.77090601843686,10.8413209251858,8.42763196961215,6.70373901567893,12.0841653248299,19.6365745053121,11.2079904759966,3.17408349321616,5.5124185923576,8.15711158725036,2.8339315265117,16.2826536238294,8.2046545696302,33.2734639012668,4.35690690524573,8.55820921848811,11.4215536207324,5.39812451755641,8.02194118764634,8.07085833495388,4.85207797831421,10.2973165776135,11.0457588169616,9.15014621734864,9.55171170035567,9.88354836647248,14.0672522021957,15.7144016688853,3.60298218522213,10.3499260351932,8.37466049268094,5.46754669029693,12.1945209935699,8.62455018637133,21.3320175517106,10.9651553371436,13.8939129949002,10.3764034172176,10.6042814940864,14.4639495687137,15.1327674998471,12.7462776889693,8.87882546270061,5.41084457992097,5.5312314026774,4.97315227368514,13.72988606132,5.26182188502793,4.37317211270682,7.67496673055277,14.7567014558966,8.0128950857161,4.48435461302062,27.3947616152849,7.98932087508899,21.4988259549173,10.2211458172619,16.2754020084708,15.6925924246969,8.69291361512897,17.6376500240656,6.42370108905414,8.36520537760355,26.2678671489355,7.31386509994472,4.25995202630035,4.4310970474762,11.0080633049642,8.7060610046739,6.82454048461504,6.68877257284203,5.36906072629403,6.18346471776031,1.95068679971631,9.71143255781842,13.0381764707434,11.598144313382,23.3141276668387,14.0363678077263,13.7276034861344,7.37304562820925,12.4240690242856,19.6793524974318,5.73658805553359,11.6532978742996,9.39806110167016,7.52507674178437,17.4055308445273,20.5038595978415,12.7600503624714,21.3873408235502,17.7515405585028,12.5746064868985,14.5675072868773,21.0132714793862,5.69664588772095,8.57058905307156,5.64631794745107,3.61086150101257,19.719082482656,17.4317127693725,17.2007499781742,6.46863404992057,6.32320858775507,19.1994303749766,12.6966441723696,7.81189538150178,11.092215087154,10.8156640530947,14.6353052808692,9.7246359047689,10.6426740849607,12.1366707392958,5.07713070004565,16.4491870167372,11.7832543467416,8.18409940756986,6.43113912374828,6.63335551567024,16.9630113213508,16.4190166063755,22.1399921261279,15.8888718196575,21.2295522891834,4.70953822838576,17.8848514761643,19.4032501399891,15.0224556048903,14.0315653444965,14.9521557692384,13.6272190246085,11.9757728356565,5.20980919110237,8.43146032433952,25.0993966973022,8.53339420012575,11.7320471201727,12.835351639201,12.2068853494722,24.633000644864,14.2904393449629,3.20568492303233 | ||
|short_description=p2@RUFY3 | |short_description=p2@RUFY3 | ||
}} | }} |
Latest revision as of 11:03, 18 September 2015
Short description: | p2@RUFY3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RUFY3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417478_5end |
EntrezGene: | RUFY3 |
HGNC: | 30285 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.41e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.41e-15 | 42 |
granulocyte monocyte progenitor cell | 9.78e-15 | 67 |
macrophage dendritic cell progenitor | 1.79e-13 | 61 |
defensive cell | 2.55e-13 | 48 |
phagocyte | 2.55e-13 | 48 |
monopoietic cell | 5.25e-13 | 59 |
monocyte | 5.25e-13 | 59 |
monoblast | 5.25e-13 | 59 |
promonocyte | 5.25e-13 | 59 |
myeloid lineage restricted progenitor cell | 4.63e-12 | 66 |
myeloid leukocyte | 3.86e-10 | 72 |
leukocyte | 8.74e-10 | 136 |
nongranular leukocyte | 1.15e-08 | 115 |
myeloid cell | 7.77e-08 | 108 |
common myeloid progenitor | 7.77e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 9.96e-08 | 120 |
dendritic cell | 1.92e-07 | 10 |
hematopoietic stem cell | 3.11e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.77e-11 | 82 |
bone marrow | 5.13e-11 | 76 |
immune system | 9.82e-11 | 93 |
adult organism | 5.68e-10 | 114 |
hematopoietic system | 8.00e-10 | 98 |
blood island | 8.00e-10 | 98 |
hemolymphoid system | 2.70e-09 | 108 |
skeletal element | 4.37e-09 | 90 |
skeletal system | 3.40e-07 | 100 |
nervous system | 8.35e-07 | 89 |