FFCP PHASE1:Hg19::chr9:98269730..98269741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt=Q13635,Q59FG5 | |UniProt=Q13635,Q59FG5 | ||
|association_with_transcript=-31bp_to_ENST00000429896,NM_001083606,uc010mrp.2_5end | |association_with_transcript=-31bp_to_ENST00000429896,NM_001083606,uc010mrp.2_5end | ||
|cluster_id=chr9:98269730..98269741,- | |||
|description=CAGE_peak_7_at_PTCH1_5end | |description=CAGE_peak_7_at_PTCH1_5end | ||
|id=chr9:98269730..98269741,- | |id=chr9:98269730..98269741,- | ||
|ontology_enrichment_celltype=CL:0000838!4.98e-13!52;CL:0000542!1.78e-12!53;CL:0000051!1.78e-12!53;CL:0000791!2.64e-10!18;CL:0000789!2.64e-10!18;CL:0002420!2.64e-10!18;CL:0002419!2.64e-10!18;CL:0000790!2.64e-10!18;CL:0000625!4.68e-08!11;CL:0000084!3.96e-07!25;CL:0000827!3.96e-07!25 | |ontology_enrichment_celltype=CL:0000838!4.98e-13!52;CL:0000542!1.78e-12!53;CL:0000051!1.78e-12!53;CL:0000791!2.64e-10!18;CL:0000789!2.64e-10!18;CL:0002420!2.64e-10!18;CL:0002419!2.64e-10!18;CL:0000790!2.64e-10!18;CL:0000625!4.68e-08!11;CL:0000084!3.96e-07!25;CL:0000827!3.96e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.42e-35;18!CL:0000789;1.42e-35;18!CL:0002419;1.42e-35;18!CL:0000625;1.24e-33;11!CL:0000084;6.64e-25;25!CL:0000542;1.49e-18;53!CL:0000623;1.01e-15;3!CL:0000236;1.18e-08;13!CL:0002087;7.27e-08;104!CL:0000624;1.19e-07;6!CL:0000226;2.39e-07;3!CL:0000842;2.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.77e-36,18;CL:0000789,7.77e-36,18;CL:0002420,7.77e-36,18;CL:0002419,7.77e-36,18;CL:0000790,7.77e-36,18;CL:0000625,7.35e-34,11;CL:0000838,3.97e-32,52;CL:0000542,1.97e-31,53;CL:0000051,1.97e-31,53;CL:0000084,4.34e-25,25;CL:0000827,4.34e-25,25;CL:0002087,2.28e-16,115;CL:0000738,6.39e-16,136;CL:0000623,1.23e-15,3;CL:0000825,1.23e-15,3;CL:0002031,7.59e-14,120;CL:0000037,7.81e-12,168;CL:0000988,5.93e-11,177;CL:0002032,3.32e-10,161;CL:0000837,3.32e-10,161;CL:0000236,3.41e-08,14;CL:0000624,1.04e-07,6;CL:0000226,2.39e-07,3;CL:0000842,2.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.42e-35;18!CL:0000051;1.49e-18;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-19!115;UBERON:0001049!7.69e-10!57;UBERON:0005068!7.69e-10!57;UBERON:0006241!7.69e-10!57;UBERON:0007135!7.69e-10!57;UBERON:0002616!4.44e-09!59;UBERON:0003080!3.05e-08!42;UBERON:0002780!1.12e-07!41;UBERON:0001890!1.12e-07!41;UBERON:0006240!1.12e-07!41;UBERON:0002346!5.31e-07!90;UBERON:0000955!9.82e-07!69;UBERON:0006238!9.82e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!2.78e-19!115;UBERON:0001049!7.69e-10!57;UBERON:0005068!7.69e-10!57;UBERON:0006241!7.69e-10!57;UBERON:0007135!7.69e-10!57;UBERON:0002616!4.44e-09!59;UBERON:0003080!3.05e-08!42;UBERON:0002780!1.12e-07!41;UBERON:0001890!1.12e-07!41;UBERON:0006240!1.12e-07!41;UBERON:0002346!5.31e-07!90;UBERON:0000955!9.82e-07!69;UBERON:0006238!9.82e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.88e-08;15!UBERON:0000179;9.88e-08;15!UBERON:0000463;9.88e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.95e-08,15;UBERON:0000179,8.95e-08,15;UBERON:0000463,8.95e-08,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0,0.376627918784408,0.458480434487708,0.0821005894499457,0.0787107813136792,0.393364276848904,2.30297638858328,0.464448369948228,0,0,0,0,0.284338464974843,0,0,0.200544447470142,1.08505435357926,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0.426730222566507,1.60158394814405,1.14950487990897,0,0.954053754535364,1.70763890732835,1.76171156811282,0.764546456250458,0,0.560508562981536,0,2.9506465517075,0.393010762749165,1.23360899399706,0.334372990781356,1.62961133316795,1.4203434172042,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0.889719378972363,2.94294910898684,3.1360657141493,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,1.27426165729639,0,1.90090408889675,2.40920190524436,1.4078527226986,1.24930726552346,1.65744076430812,0.821127996921047,2.01606743224732,2.67440195783507,2.46201486600758,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.261958150995425,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.368965315629341,0,0.109750285408626,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.528290604079356,1.03664057770386,0.864719720501769,0.88369703398466,0.126995788584338,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,2.1673383622212,2.58753089831421,2.05348858047597,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.206768026122887,1.50999940573032,2.02782359826544,0,0,0,0.248107807818777,0,0,0,0,0,1.48418066444991,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,0,0.828728900423067,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.183138929636687,0,0,0,0,0.386682873168488,0,0.307007349452259,0.137836572484531,0.644521469209642,0,0.0852266274161009,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0.699869440489966,0.192444225451024,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,0,0.714695326373367,1.23408681925858,1.94541993357815,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0.649243880549111,0,0.456469358066384,0,0,0,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0.66614393599564,0,0.561421621224659,0.146508179271894,0,0,0.568272293612826,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.597743964753209,0.552567831062295,0,0,0.615424027305347,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,1.10579259931225,0.295547618953547,0,0.21787692703798,0.278847488557207,0.461701551022782,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.442287822516696,0,0.296521128680622,0,0,0.943615861729479,0,0.468528891450678,0.182454789215666,0,0,0,1.20990716048664,0.61214552326098,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0.52418000472609,0,0,0.0730893170861856,0.164230914106418,0.775912131907355,0.0882561266915003,0.677942222341597,0,0,0.443175571691151,0,0.320635281006135,0.426905989478705,0.19980960958213,0.144090417154106,0.343609788497747,0,0.14405479798815,0.248505071130865,0,0,0,0.101998217636322,0,0.600420288709789,0.821432273351958,0,0,0.788662062837943,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0.446342914883745,0.268733889946905,0,0,0.157566364614447,0.164831716762333,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| ||
|short_description=p7@PTCH1 | |short_description=p7@PTCH1 | ||
}} | }} |
Latest revision as of 10:53, 18 September 2015
Short description: | p7@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000429896, NM_001083606, uc010mrp.2_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | Q13635Q59FG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.77e-36 | 18 |
alpha-beta T cell | 7.77e-36 | 18 |
immature T cell | 7.77e-36 | 18 |
mature T cell | 7.77e-36 | 18 |
immature alpha-beta T cell | 7.77e-36 | 18 |
CD8-positive, alpha-beta T cell | 7.35e-34 | 11 |
lymphoid lineage restricted progenitor cell | 3.97e-32 | 52 |
lymphocyte | 1.97e-31 | 53 |
common lymphoid progenitor | 1.97e-31 | 53 |
T cell | 4.34e-25 | 25 |
pro-T cell | 4.34e-25 | 25 |
nongranular leukocyte | 2.28e-16 | 115 |
leukocyte | 6.39e-16 | 136 |
natural killer cell | 1.23e-15 | 3 |
pro-NK cell | 1.23e-15 | 3 |
hematopoietic lineage restricted progenitor cell | 7.59e-14 | 120 |
hematopoietic stem cell | 7.81e-12 | 168 |
hematopoietic cell | 5.93e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.32e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.32e-10 | 161 |
B cell | 3.41e-08 | 14 |
CD4-positive, alpha-beta T cell | 1.04e-07 | 6 |
single nucleate cell | 2.39e-07 | 3 |
mononuclear cell | 2.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.95e-08 | 15 |
haemolymphatic fluid | 8.95e-08 | 15 |
organism substance | 8.95e-08 | 15 |