FFCP PHASE1:Hg19::chr16:89043559..89043601,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:89043559..89043601,-
|short_description=p4@CBFA2T3
|description=CAGE_peak_4_at_CBFA2T3_5end
|association_with_transcript=-55bp_to_NM_005187_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=863 | |EntrezGene=863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |HGNC=1537 | ||
|TSSclassifier=strong | |||
|UniProt=O75081 | |UniProt=O75081 | ||
|association_with_transcript=-55bp_to_NM_005187_5end | |||
|cluster_id=chr16:89043559..89043601,- | |||
|coexpression_cluster_id=C3602 | |||
|description=CAGE_peak_4_at_CBFA2T3_5end | |||
|id=chr16:89043559..89043601,- | |||
|ontology_enrichment_celltype=CL:0000037!1.63e-59!172;CL:0000566!1.63e-59!172;CL:0002032!4.77e-55!165;CL:0000837!4.77e-55!165;CL:0000988!3.42e-54!182;CL:0000763!6.60e-49!112;CL:0000049!6.60e-49!112;CL:0000738!1.48e-30!140;CL:0002031!9.09e-29!124;CL:0002087!2.40e-26!119;CL:0000839!2.09e-24!70;CL:0000557!1.99e-22!71;CL:0000766!3.33e-22!76;CL:0002057!4.73e-18!42;CL:0002194!5.40e-18!63;CL:0000576!5.40e-18!63;CL:0000040!5.40e-18!63;CL:0000559!5.40e-18!63;CL:0002009!4.73e-17!65;CL:0000860!3.66e-16!45;CL:0000945!5.14e-12!24;CL:0000826!5.14e-12!24;CL:0000134!1.74e-11!358;CL:0002320!1.03e-10!365;CL:0002393!1.31e-10!9;CL:0002397!1.31e-10!9;CL:0000236!3.20e-08!14;CL:0000219!4.43e-08!390;CL:0002274!6.44e-08!5;CL:0000457!6.44e-08!5;CL:0002191!6.44e-08!5;CL:0000097!6.44e-08!5;CL:0000831!6.44e-08!5;CL:0002028!6.44e-08!5;CL:0000542!2.40e-07!53;CL:0000051!2.40e-07!53;CL:0000838!6.40e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.00e-12;5!CL:0000763;1.76e-12;100!CL:0002393;7.57e-12;6!CL:0002397;7.57e-12;6!CL:0000163;3.56e-09;9!CL:0000988;1.19e-08;177!CL:0000945;2.83e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.65e-47,168;CL:0000763,2.87e-46,108;CL:0000049,2.87e-46,108;CL:0002032,2.00e-45,161;CL:0000837,2.00e-45,161;CL:0000988,3.80e-44,177;CL:0002031,1.12e-15,120;CL:0000738,2.74e-15,136;CL:0002393,4.05e-14,9;CL:0002397,4.05e-14,9;CL:0000839,6.22e-14,66;CL:0000134,5.54e-13,354;CL:0000097,9.84e-13,5;CL:0002028,9.84e-13,5;CL:0002320,2.15e-12,361;CL:0000557,2.37e-12,67;CL:0000766,4.33e-12,72;CL:0002087,5.35e-12,115;CL:0000219,2.43e-10,386;CL:0000163,4.28e-09,9;CL:0000034,5.34e-09,441;CL:0000945,2.13e-08,24;CL:0000826,2.13e-08,24;CL:0000048,2.39e-08,427;CL:0000723,5.28e-08,433;CL:0002194,3.25e-07,59;CL:0000576,3.25e-07,59;CL:0000040,3.25e-07,59;CL:0000559,3.25e-07,59;CL:0002009,7.59e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000049;8.48e-12;108 | |||
|ontology_enrichment_disease=DOID:8692!3.25e-34!31;DOID:1240!2.73e-32!39;DOID:2531!2.13e-24!51;DOID:0060083!2.13e-24!51;DOID:1036!1.00e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.09e-54;31!DOID:1240;1.76e-39;39!DOID:2531;1.11e-22;51!DOID:0060083;1.11e-22;51!DOID:1036;1.58e-14;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.12e-56,31;DOID:1240,1.06e-49,39;DOID:2531,1.17e-35,51;DOID:0060083,1.17e-35,51;DOID:1036,1.48e-14,8;DOID:0050686,1.26e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.69e-29!102;UBERON:0003061!7.69e-29!102;UBERON:0002193!7.69e-27!112;UBERON:0002371!3.70e-19!80;UBERON:0001474!8.86e-17!86;UBERON:0002405!6.70e-16!115;UBERON:0007023!1.21e-13!115;UBERON:0004765!3.53e-12!101;UBERON:0001434!3.53e-12!101;UBERON:0002384!4.94e-10!375;UBERON:0000178!1.08e-09!15;UBERON:0000179!1.08e-09!15;UBERON:0000463!1.08e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.58e-17;15!UBERON:0000179;5.58e-17;15!UBERON:0000463;5.58e-17;15!UBERON:0002390;7.20e-13;32!UBERON:0002193;4.86e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-23,98;UBERON:0003061,1.39e-23,98;UBERON:0002193,3.99e-23,108;UBERON:0000178,8.28e-17,15;UBERON:0000179,8.28e-17,15;UBERON:0000463,8.28e-17,15;UBERON:0002405,9.86e-13,93;UBERON:0002384,1.35e-11,371;UBERON:0002371,3.68e-10,76;UBERON:0001474,5.58e-09,82;UBERON:0004765,1.15e-07,90;UBERON:0003081,9.51e-07,203 | |||
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| ||
|short_description=p4@CBFA2T3 | |||
}} | }} |
Latest revision as of 10:49, 18 September 2015
Short description: | p4@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CBFA2T3_5end |
Coexpression cluster: | C3602_Mast_chronic_leukemia_hairy_acute_biphenotypic_CD14CD16 |
Association with transcript: | -55bp_to_NM_005187_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.65e-47 | 168 |
myeloid cell | 2.87e-46 | 108 |
common myeloid progenitor | 2.87e-46 | 108 |
hematopoietic oligopotent progenitor cell | 2.00e-45 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-45 | 161 |
hematopoietic cell | 3.80e-44 | 177 |
hematopoietic lineage restricted progenitor cell | 1.12e-15 | 120 |
leukocyte | 2.74e-15 | 136 |
intermediate monocyte | 4.05e-14 | 9 |
CD14-positive, CD16-positive monocyte | 4.05e-14 | 9 |
myeloid lineage restricted progenitor cell | 6.22e-14 | 66 |
mesenchymal cell | 5.54e-13 | 354 |
mast cell | 9.84e-13 | 5 |
basophil mast progenitor cell | 9.84e-13 | 5 |
connective tissue cell | 2.15e-12 | 361 |
granulocyte monocyte progenitor cell | 2.37e-12 | 67 |
myeloid leukocyte | 4.33e-12 | 72 |
nongranular leukocyte | 5.35e-12 | 115 |
motile cell | 2.43e-10 | 386 |
endocrine cell | 4.28e-09 | 9 |
stem cell | 5.34e-09 | 441 |
lymphocyte of B lineage | 2.13e-08 | 24 |
pro-B cell | 2.13e-08 | 24 |
multi fate stem cell | 2.39e-08 | 427 |
somatic stem cell | 5.28e-08 | 433 |
monopoietic cell | 3.25e-07 | 59 |
monocyte | 3.25e-07 | 59 |
monoblast | 3.25e-07 | 59 |
promonocyte | 3.25e-07 | 59 |
macrophage dendritic cell progenitor | 7.59e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-23 | 98 |
blood island | 1.39e-23 | 98 |
hemolymphoid system | 3.99e-23 | 108 |
blood | 8.28e-17 | 15 |
haemolymphatic fluid | 8.28e-17 | 15 |
organism substance | 8.28e-17 | 15 |
immune system | 9.86e-13 | 93 |
connective tissue | 1.35e-11 | 371 |
bone marrow | 3.68e-10 | 76 |
bone element | 5.58e-09 | 82 |
skeletal element | 1.15e-07 | 90 |
lateral plate mesoderm | 9.51e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.12e-56 | 31 |
leukemia | 1.06e-49 | 39 |
hematologic cancer | 1.17e-35 | 51 |
immune system cancer | 1.17e-35 | 51 |
chronic leukemia | 1.48e-14 | 8 |
organ system cancer | 1.26e-07 | 137 |