FFCP PHASE1:Hg19::chr12:46660265..46660305,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13447 | |HGNC=13447 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001rpa.2_5end | |association_with_transcript=0bp_to_uc001rpa.2_5end | ||
|cluster_id=chr12:46660265..46660305,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_11_at_SLC38A1_5end | |description=CAGE_peak_11_at_SLC38A1_5end | ||
|id=chr12:46660265..46660305,- | |id=chr12:46660265..46660305,- | ||
|ontology_enrichment_celltype=CL:0000066!5.89e-08!254 | |ontology_enrichment_celltype=CL:0000066!5.89e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.11e-10!106;DOID:0050687!1.36e-08!143 | |ontology_enrichment_disease=DOID:305!9.11e-10!106;DOID:0050687!1.36e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5409;5.71e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,4.67e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000064!1.21e-08!219;UBERON:0001049!1.65e-07!57;UBERON:0005068!1.65e-07!57;UBERON:0006241!1.65e-07!57;UBERON:0007135!1.65e-07!57 | |ontology_enrichment_uberon=UBERON:0000064!1.21e-08!219;UBERON:0001049!1.65e-07!57;UBERON:0005068!1.65e-07!57;UBERON:0006241!1.65e-07!57;UBERON:0007135!1.65e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.24e-07;4!UBERON:0004733;8.93e-07;12!UBERON:0002028;8.93e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.60e-08,15;UBERON:0003057,2.60e-08,15;UBERON:0000995,4.45e-08,21;UBERON:0005795,1.45e-07,22;UBERON:0003975,1.45e-07,22;UBERON:0001987,2.04e-07,4;UBERON:0004340,2.04e-07,4;UBERON:0004733,9.42e-07,12;UBERON:0002028,9.42e-07,12;UBERON:0007277,9.42e-07,12 | |||
|phase1_expression=0.908391896352783,1.07050261945492,4.65149533516705,0,0,0.872338524100369,0,0,0,0,0,3.05817920982241,3.9565046734268,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.687720651731561,0.57470412614962,0.393553906568396,0,0.383829398097213,0.464448369948228,0,0,1.47901604066715,0,0.426507697462265,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,1.29096936716765,0,0,0.545812300115692,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,0,0.560508562981536,0,0.393419540227666,1.96505381374582,0.411202997999018,0,0.651844533267181,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0.541607727530031,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.802320587350522,1.01377082717959,0,0,0.383587685530591,0,0,0,0,0,0.945348171640679,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,1.8089173141853,5.33649394030065,1.00416183829401,0.805658634218294,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.886413581652058,4.36950296683622,3.15520282823695,0.709336764396714,0.560677600142307,0,0,0,0,0.326923806226917,0,0.576175924479999,0.70296429550139,0.936480230490962,0,0.298897361103602,0.23486899728753,0.323745888736263,0,0.61246251376468,0.245668634623536,0.619954687054593,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,1.43402297694502,0.731842236777572,0.397589304964456,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.828147600278907,0.337169380156203,0.723033089650446,0.661763836394364,0.217879444092406,0.71181185733329,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0.514703430895577,0.439001141634502,2.24803506515239,0.804231779293047,0.555530670951178,1.95484983186195,0,0,0.34779121492523,0,0.433099343283221,0.462985512576611,1.14152491340759,1.58040879591855,2.57545848628462,0,0,0,0,0,0.141775097242386,3.13454829459969,2.61570544662566,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,1.03417372606222,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.579125226670317,2.67119219315498,1.96967059563885,0.224170287987055,0.591092280605782,1.2937654491571,1.02674429023799,0,0,0,0,0,0,0,0,0.36807447515742,0,0.813795071099207,0,0,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0.413536052245775,0,0.213455115606889,3.94065842880137,14.9791895559447,6.95497674658265,1.48864684691266,0.460385919864187,0,4.74114852246094,1.02341449813341,0.482561763430822,0,0,0,0,0,0,0.241718899183244,0.200506470303285,2.3941057123333,1.60740227430449,1.27463817604702,6.55622074797121,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5405933045449,0,0,0,0,0,1.25671933779759,0,0.767518373630648,0.275673144969061,1.18162269355101,0.290033387828457,0.426133137080504,0.890320356467374,0.661139661443912,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,1.48863347743867,0.316379424718726,0,0,1.28381696410176,0,0,0.719489830333259,2.47083326762449,1.7671860351853,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,1.00387946542836,0.0982490410131212,0,0.709522128141196,1.26664581178598,0,0,0,1.05844323998063,0,0,12.2386941009813,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,5.77487913158015,0.490080431962063,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0.852408440419239,0.95497793895076,15.7391280841298,0.307160702099232,0.994147647766298,0.703347082052564,0.445234820091624,0,0,0,0,0,2.0453736500431,0.369254416383208,0,0,1.79021174675609,0,0.197286811273867,0,0,0,2.41197055220813,0,6.77112178821606,9.97043999956631,0,0.682760689712998,0,2.6002644994473,0,0.291604613383254,0.173624994933292,0.885741385813839,0.60298219312704,4.5774520895125,4.64432891711143,5.02430952221031,0.87754158861589,0,13.2452557064673,0.230850775511391,2.62066728448103,1.61394733071642,1.25660702173681,2.82483166997221,1.91400695839152,0.915975934018623,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0,0,1.94749775767882,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0,3.16785325009182,0,0.937057782901357,0,0.19566461893209,10.6823366995001,0,1.20990716048664,0,2.27471686662557,0.751617097072463,0.207376382794494,3.98792323624311,8.27479889688747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| ||
|short_description=p11@SLC38A1 | |short_description=p11@SLC38A1 | ||
}} | }} |
Latest revision as of 10:38, 18 September 2015
Short description: | p11@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC38A1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_uc001rpa.2_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 2.60e-08 | 15 |
chordal neural plate | 2.60e-08 | 15 |
uterus | 4.45e-08 | 21 |
embryonic uterus | 1.45e-07 | 22 |
internal female genitalia | 1.45e-07 | 22 |
placenta | 2.04e-07 | 4 |
allantois | 2.04e-07 | 4 |
segmental subdivision of hindbrain | 9.42e-07 | 12 |
hindbrain | 9.42e-07 | 12 |
presumptive hindbrain | 9.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 4.67e-07 | 4 |