FFCP PHASE1:Hg19::chr10:51565239..51565263,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:51565239..51565263,+
|short_description=p2@NCOA4
|description=CAGE_peak_2_at_NCOA4_5end
|association_with_transcript=9bp_to_ENST00000414907_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8031 | |EntrezGene=8031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7671 | |HGNC=7671 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZ85 | |UniProt=B4DZ85 | ||
|association_with_transcript=9bp_to_ENST00000414907_5end | |||
|cluster_id=chr10:51565239..51565263,+ | |||
|description=CAGE_peak_2_at_NCOA4_5end | |||
|id=chr10:51565239..51565263,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.50e-19!112;CL:0000049!3.50e-19!112;CL:0000766!5.04e-17!76;CL:0002057!6.89e-17!42;CL:0000860!2.40e-16!45;CL:0000839!5.77e-15!70;CL:0000557!1.18e-14!71;CL:0002009!4.71e-14!65;CL:0002194!9.74e-14!63;CL:0000576!9.74e-14!63;CL:0000040!9.74e-14!63;CL:0000559!9.74e-14!63;CL:0000048!3.84e-13!430;CL:0000134!6.74e-13!358;CL:0000723!2.05e-12!436;CL:0000034!3.01e-12!444;CL:0002320!1.52e-11!365;CL:0000063!2.33e-11!578;CL:0000012!1.35e-10!682;CL:0000144!8.04e-10!625;CL:0000219!1.16e-09!390;CL:0000548!1.42e-09!679;CL:0000004!1.42e-09!679;CL:0000255!1.42e-09!679;CL:0002032!2.13e-08!165;CL:0000837!2.13e-08!165;CL:0002371!2.44e-08!591;CL:0000037!7.70e-08!172;CL:0000566!7.70e-08!172;CL:0000003!2.14e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.45e-14;33!CL:0002057;2.45e-14;33!CL:0000473;1.04e-12;39!CL:0000234;1.04e-12;39!CL:0000576;6.12e-11;48!CL:0000766;4.68e-09;69!CL:0000763;2.71e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.49e-19,108;CL:0000049,1.49e-19,108;CL:0000473,7.28e-18,48;CL:0000234,7.28e-18,48;CL:0000766,1.40e-17,72;CL:0000860,6.89e-17,42;CL:0002057,6.89e-17,42;CL:0000839,1.71e-15,66;CL:0000557,3.71e-15,67;CL:0002009,1.37e-14,61;CL:0002194,2.78e-14,59;CL:0000576,2.78e-14,59;CL:0000040,2.78e-14,59;CL:0000559,2.78e-14,59;CL:0000134,7.11e-13,354;CL:0000048,7.49e-13,427;CL:0000723,3.95e-12,433;CL:0000034,5.79e-12,441;CL:0002320,1.61e-11,361;CL:0000219,1.26e-09,386;CL:0002032,1.96e-08,161;CL:0000837,1.96e-08,161;CL:0000037,7.28e-08,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-17!102;UBERON:0003061!1.30e-17!102;UBERON:0002193!9.47e-17!112;UBERON:0002405!6.51e-14!115;UBERON:0002371!2.50e-13!80;UBERON:0001474!4.29e-12!86;UBERON:0003081!1.16e-11!216;UBERON:0004765!3.82e-11!101;UBERON:0001434!3.82e-11!101;UBERON:0002384!3.28e-10!375;UBERON:0002204!1.07e-08!167;UBERON:0000926!6.45e-08!448;UBERON:0004120!6.45e-08!448;UBERON:0006603!6.45e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.42e-18,98;UBERON:0003061,5.42e-18,98;UBERON:0002193,4.67e-17,108;UBERON:0003081,1.05e-14,203;UBERON:0002371,1.06e-13,76;UBERON:0002405,9.05e-13,93;UBERON:0001474,2.19e-12,82;UBERON:0004765,5.10e-12,90;UBERON:0001434,1.18e-10,100;UBERON:0002384,3.52e-10,371;UBERON:0000926,5.03e-10,315;UBERON:0004120,5.03e-10,315;UBERON:0006603,5.03e-10,315;UBERON:0002204,4.52e-08,167 | |||
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| ||
|short_description=p2@NCOA4 | |||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p2@NCOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCOA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000414907_5end |
EntrezGene: | NCOA4 |
HGNC: | 7671 |
UniProt: | B4DZ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.49e-19 | 108 |
common myeloid progenitor | 1.49e-19 | 108 |
defensive cell | 7.28e-18 | 48 |
phagocyte | 7.28e-18 | 48 |
myeloid leukocyte | 1.40e-17 | 72 |
classical monocyte | 6.89e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.89e-17 | 42 |
myeloid lineage restricted progenitor cell | 1.71e-15 | 66 |
granulocyte monocyte progenitor cell | 3.71e-15 | 67 |
macrophage dendritic cell progenitor | 1.37e-14 | 61 |
monopoietic cell | 2.78e-14 | 59 |
monocyte | 2.78e-14 | 59 |
monoblast | 2.78e-14 | 59 |
promonocyte | 2.78e-14 | 59 |
mesenchymal cell | 7.11e-13 | 354 |
multi fate stem cell | 7.49e-13 | 427 |
somatic stem cell | 3.95e-12 | 433 |
stem cell | 5.79e-12 | 441 |
connective tissue cell | 1.61e-11 | 361 |
motile cell | 1.26e-09 | 386 |
hematopoietic oligopotent progenitor cell | 1.96e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-08 | 161 |
hematopoietic stem cell | 7.28e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.42e-18 | 98 |
blood island | 5.42e-18 | 98 |
hemolymphoid system | 4.67e-17 | 108 |
lateral plate mesoderm | 1.05e-14 | 203 |
bone marrow | 1.06e-13 | 76 |
immune system | 9.05e-13 | 93 |
bone element | 2.19e-12 | 82 |
skeletal element | 5.10e-12 | 90 |
skeletal system | 1.18e-10 | 100 |
connective tissue | 3.52e-10 | 371 |
mesoderm | 5.03e-10 | 315 |
mesoderm-derived structure | 5.03e-10 | 315 |
presumptive mesoderm | 5.03e-10 | 315 |
musculoskeletal system | 4.52e-08 | 167 |