FFCP PHASE1:Hg19::chr21:40032581..40032605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2078 | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3446 | |HGNC=3446 | ||
|TSSclassifier=strong | |||
|UniProt=P11308,B4DVX5 | |UniProt=P11308,B4DVX5 | ||
|association_with_transcript=0bp_to_ENST00000398919,NM_001243428,uc010gnw.2,uc010gnx.2_5end | |association_with_transcript=0bp_to_ENST00000398919,NM_001243428,uc010gnw.2,uc010gnx.2_5end | ||
|cluster_id=chr21:40032581..40032605,- | |||
|coexpression_cluster_id=C4077 | |||
|description=CAGE_peak_4_at_ERG_5end | |description=CAGE_peak_4_at_ERG_5end | ||
|id=chr21:40032581..40032605,- | |id=chr21:40032581..40032605,- | ||
|ontology_enrichment_celltype=CL:0000153!1.33e-12!9;CL:0000447!1.33e-12!9;CL:0000667!3.00e-08!6;CL:0000058!3.00e-08!6;CL:0000138!3.00e-08!6;CL:0000327!2.16e-07!14 | |ontology_enrichment_celltype=CL:0000153!1.33e-12!9;CL:0000447!1.33e-12!9;CL:0000667!3.00e-08!6;CL:0000058!3.00e-08!6;CL:0000138!3.00e-08!6;CL:0000327!2.16e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.36e-40;9!CL:0000447;1.36e-40;9!CL:0000138;5.02e-32;6!CL:0000327;4.51e-24;15!CL:0000499;1.57e-12;28!CL:0000214;8.46e-11;3!CL:0000151;3.25e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.21e-40,9;CL:0000447,1.21e-40,9;CL:0000058,5.71e-32,6;CL:0000138,5.71e-32,6;CL:0000327,4.21e-24,15;CL:0000499,1.52e-12,28;CL:0000214,6.95e-11,3;CL:0000151,1.42e-09,36 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.42e-08;1!UBERON:0005062;3.59e-08;4!UBERON:0007284;3.59e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;1.42e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,9.02e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.13e-11!115;UBERON:0004457!2.52e-07!12;UBERON:0000042!2.52e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.36e-13;9!UBERON:0000042;3.36e-13;9!UBERON:0006915;8.46e-11;3!UBERON:0007616;8.46e-11;3!UBERON:0002217;8.46e-11;3!UBERON:0002018;8.46e-11;3!UBERON:0003978;1.32e-10;3!UBERON:0000946;1.32e-10;3!UBERON:0002363;1.42e-08;1!UBERON:0002135;1.42e-08;1!UBERON:0002146;1.42e-08;1!UBERON:0002426;1.42e-08;1!UBERON:0003831;1.42e-08;1!UBERON:0003898;1.42e-08;1!UBERON:0004830;1.42e-08;1!UBERON:0005623;1.42e-08;1!UBERON:0003830;1.42e-08;1!UBERON:0005175;1.42e-08;1!UBERON:0001774;1.42e-08;1!UBERON:0001103;1.42e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,6.95e-11,3;UBERON:0007616,6.95e-11,3;UBERON:0002217,6.95e-11,3;UBERON:0002018,6.95e-11,3;UBERON:0003978,9.35e-11,3;UBERON:0009751,9.35e-11,3;UBERON:0000946,9.35e-11,3;UBERON:0002523,9.35e-11,3;UBERON:0005983,9.35e-11,3;UBERON:0002165,9.35e-11,3;UBERON:0002062,9.35e-11,3;UBERON:0007280,9.35e-11,3;UBERON:0004457,6.98e-10,12;UBERON:0000042,6.98e-10,12;UBERON:0002146,9.74e-09,1;UBERON:0005623,9.74e-09,1;UBERON:0002426,1.13e-08,1;UBERON:0003831,1.13e-08,1;UBERON:0003898,1.13e-08,1;UBERON:0004830,1.13e-08,1;UBERON:0003830,1.13e-08,1;UBERON:0005175,1.13e-08,1;UBERON:0001774,1.13e-08,1;UBERON:0001103,1.13e-08,1;UBERON:0010084,1.13e-08,1;UBERON:0002135,1.22e-08,1;UBERON:0002363,2.06e-08,1;UBERON:0007645,2.06e-08,1;UBERON:0007647,2.06e-08,1;UBERON:0010115,2.06e-08,1 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78302643815306,4.51204119572301,2.02785126545153,8.74814541756209,16.058950719987,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.675105328965065,0.68205903612839,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0.561320188866147,0,1.02341449813341,0,0,0,0.177561725313127,0.492762936082855,0,0.813472649219715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,3.17510374085824,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,13.1503672245706,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.980446171670911,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57360239097319,0,0.265372693510018,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,1.01098527405581,0.150323419414493,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0,0,0,0,0,0,0,0,2.03382666702479,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0,3.77508995296322,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,1.39641200636127,1.83328339209347,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0.394028536495991,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0.558644917973244,0,0,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0.733714394086716,0.577628330751691,0,0.690359926060101,0,0.225630985047772,2.82387096184928,0,0,0,0,0,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0.701818390386317,0,0,0,0,0.452888530700021,0,0,0.470317296361523,0.245148321753905,0,0,0,0.4226557275834,1.86919826156599,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,2.0510303085114,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0.103432995861895,0.852935927603924,0.476128862927481,0,0.186224142887574,0,0.190941474834495,0,0.653150243690884,0,0.202056159043763,0.573777643141411,3.32660356546013,0,0,0,0,0,0.855690109280065,0.813792356631477,0,0.805095174364105,0 | |phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78302643815306,4.51204119572301,2.02785126545153,8.74814541756209,16.058950719987,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.675105328965065,0.68205903612839,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0.561320188866147,0,1.02341449813341,0,0,0,0.177561725313127,0.492762936082855,0,0.813472649219715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,3.17510374085824,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,13.1503672245706,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.980446171670911,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57360239097319,0,0.265372693510018,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,1.01098527405581,0.150323419414493,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0,0,0,0,0,0,0,0,2.03382666702479,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0,3.77508995296322,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,1.39641200636127,1.83328339209347,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0.394028536495991,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0.558644917973244,0,0,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0.733714394086716,0.577628330751691,0,0.690359926060101,0,0.225630985047772,2.82387096184928,0,0,0,0,0,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0.701818390386317,0,0,0,0,0.452888530700021,0,0,0.470317296361523,0.245148321753905,0,0,0,0.4226557275834,1.86919826156599,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,2.0510303085114,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0.103432995861895,0.852935927603924,0.476128862927481,0,0.186224142887574,0,0.190941474834495,0,0.653150243690884,0,0.202056159043763,0.573777643141411,3.32660356546013,0,0,0,0,0,0.855690109280065,0.813792356631477,0,0.805095174364105,0 | ||
|short_description=p4@ERG | |short_description=p4@ERG | ||
}} | }} |
Latest revision as of 10:32, 18 September 2015
Short description: | p4@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ERG_5end |
Coexpression cluster: | C4077_aorta_Chondrocyte_colon_trachea_gastrointestinal_heart_synovial |
Association with transcript: | 0bp_to_ENST00000398919, NM_001243428, uc010gnw.2, uc010gnx.2_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | P11308B4DVX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.21e-40 | 9 |
carbohydrate secreting cell | 1.21e-40 | 9 |
chondroblast | 5.71e-32 | 6 |
chondrocyte | 5.71e-32 | 6 |
extracellular matrix secreting cell | 4.21e-24 | 15 |
stromal cell | 1.52e-12 | 28 |
synovial cell | 6.95e-11 | 3 |
secretory cell | 1.42e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 6.95e-11 | 3 |
layer of synovial tissue | 6.95e-11 | 3 |
synovial joint | 6.95e-11 | 3 |
synovial membrane of synovial joint | 6.95e-11 | 3 |
valve | 9.35e-11 | 3 |
cardiac mesenchyme | 9.35e-11 | 3 |
cardial valve | 9.35e-11 | 3 |
tunica intima | 9.35e-11 | 3 |
heart layer | 9.35e-11 | 3 |
endocardium | 9.35e-11 | 3 |
endocardial cushion | 9.35e-11 | 3 |
presumptive endocardium | 9.35e-11 | 3 |
cavity lining | 6.98e-10 | 12 |
serous membrane | 6.98e-10 | 12 |
pulmonary valve | 9.74e-09 | 1 |
semi-lunar valve | 9.74e-09 | 1 |
chest muscle | 1.13e-08 | 1 |
respiratory system muscle | 1.13e-08 | 1 |
skeletal muscle of trunk | 1.13e-08 | 1 |
respiratory system skeletal muscle | 1.13e-08 | 1 |
thoracic segment muscle | 1.13e-08 | 1 |
chest organ | 1.13e-08 | 1 |
muscle of trunk | 1.13e-08 | 1 |
diaphragm | 1.13e-08 | 1 |
future diaphragm | 1.13e-08 | 1 |
mitral valve | 1.22e-08 | 1 |
dura mater | 2.06e-08 | 1 |
future meninx | 2.06e-08 | 1 |
ectomeninx | 2.06e-08 | 1 |
future dura mater | 2.06e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 9.02e-09 | 1 |