FFCP PHASE1:Hg19::chr3:46249878..46249905,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1602 | |||
|TSSclassifier=strong | |||
|UniProt=P32246 | |||
|association_with_transcript=0bp_to_ENST00000296140_5end | |||
|cluster_id=chr3:46249878..46249905,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_2_at_CCR1_5end | |||
|id=chr3:46249878..46249905,- | |||
|ontology_enrichment_celltype=CL:0000766!2.63e-43!76;CL:0002194!3.90e-42!63;CL:0000576!3.90e-42!63;CL:0000040!3.90e-42!63;CL:0000559!3.90e-42!63;CL:0002009!4.05e-41!65;CL:0000839!2.98e-37!70;CL:0002057!5.85e-36!42;CL:0000763!1.26e-35!112;CL:0000049!1.26e-35!112;CL:0000557!2.82e-35!71;CL:0000860!2.70e-34!45;CL:0002087!5.46e-31!119;CL:0000738!2.20e-30!140;CL:0002032!6.51e-30!165;CL:0000837!6.51e-30!165;CL:0000037!7.31e-30!172;CL:0000566!7.31e-30!172;CL:0002031!2.42e-27!124;CL:0000988!5.74e-26!182;CL:0000094!1.68e-07!8;CL:0002393!2.37e-07!9;CL:0002397!2.37e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.33e-46;39!CL:0000234;7.33e-46;39!CL:0000860;1.10e-45;33!CL:0002057;1.10e-45;33!CL:0000576;6.36e-43;48!CL:0000766;1.74e-33;69!CL:0000763;4.21e-19;100!CL:0000094;1.24e-11;8!CL:0002087;1.02e-10;104!CL:0000235;1.26e-10;6!CL:0000738;1.78e-10;136!CL:0002393;1.82e-08;6!CL:0002397;1.82e-08;6!CL:0000081;5.76e-08;11!CL:0000988;6.49e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.64e-80,72;CL:0002194,6.03e-77,59;CL:0000576,6.03e-77,59;CL:0000040,6.03e-77,59;CL:0000559,6.03e-77,59;CL:0002009,8.64e-74,61;CL:0000473,5.77e-70,48;CL:0000234,5.77e-70,48;CL:0000839,9.91e-67,66;CL:0000557,1.91e-65,67;CL:0000860,2.04e-60,42;CL:0002057,2.04e-60,42;CL:0000763,3.28e-60,108;CL:0000049,3.28e-60,108;CL:0000738,5.15e-43,136;CL:0002087,4.12e-41,115;CL:0000037,1.08e-39,168;CL:0002032,1.08e-38,161;CL:0000837,1.08e-38,161;CL:0000988,2.14e-36,177;CL:0002031,1.92e-34,120;CL:0000094,1.08e-11,8;CL:0000134,1.37e-11,354;CL:0002393,1.94e-11,9;CL:0002397,1.94e-11,9;CL:0002320,6.44e-11,361;CL:0000235,1.29e-10,6;CL:0000219,1.33e-08,386;CL:0000081,5.26e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-43;42!CL:0000049;3.35e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-41!102;UBERON:0003061!1.67e-41!102;UBERON:0002193!1.14e-36!112;UBERON:0002371!3.50e-34!80;UBERON:0001474!8.59e-30!86;UBERON:0002405!2.65e-25!115;UBERON:0004765!1.73e-23!101;UBERON:0001434!1.73e-23!101;UBERON:0007023!1.52e-22!115;UBERON:0003081!1.02e-09!216;UBERON:0002204!5.78e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.86e-10;15!UBERON:0000179;4.86e-10;15!UBERON:0000463;4.86e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.52e-69,98;UBERON:0003061,2.52e-69,98;UBERON:0002193,1.51e-62,108;UBERON:0002371,5.84e-60,76;UBERON:0001474,4.18e-54,82;UBERON:0002405,1.61e-52,93;UBERON:0004765,1.61e-47,90;UBERON:0001434,8.81e-41,100;UBERON:0003081,6.90e-25,203;UBERON:0002204,1.20e-17,167;UBERON:0000926,2.48e-11,315;UBERON:0004120,2.48e-11,315;UBERON:0006603,2.48e-11,315;UBERON:0002384,1.58e-10,371;UBERON:0000178,5.46e-10,15;UBERON:0000179,5.46e-10,15;UBERON:0000463,5.46e-10,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,2.52687949370732,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.393553906568396,18.8814852887474,10.3633937486247,4.95411594611443,0,0,0,0,0,0,6.09394949385065,5.41470008169383,5.859293509328,15.8979986710346,13.2796403067782,11.3333249759042,14.8306203555156,19.6495490718181,14.7976277324568,29.0536296132106,21.3807301771349,33.4482880566712,46.8938599485105,38.6802666858942,44.458659219054,22.7532149286168,16.1371170895957,20.3139729891513,23.1538077637404,27.2906150057846,20.6745605689478,23.5684597125595,25.0324641119353,11.5080682643827,25.0686988141904,34.108285453299,30.2619572878213,17.7027635563436,9.64554881974938,5.60540024096017,54.0184630301998,42.7615993104565,59.509743449202,18.1619850790011,16.5724936194404,12.6584954976354,4.43636101255078,3.82687739937078,4.19317291016752,8.42464733598713,14.2668048199431,12.6973213490693,3.13514018115373,3.18266683518544,1.46131323011707,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,1.90810750907073,0,0,0,0,1.12101712596307,0,0.196709770113833,0,0,0.501559486172034,0,0,0,1.6711568532776,0.294605907474837,0,0,0.896639238079726,0.780356085359269,1.31550323682941,1.93445012450094,0.579606171470105,0,0,0,0.453237370790265,0,0,0,0.637130828648193,0,0,0.602300476311091,0.383959833463255,1.24930726552346,0.947109008176067,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,2.94702919869853,0,0,8.76277962867645,5.22389211897802,10.3707209204715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,3.68965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,31.7619937852743,23.4004265139238,17.5384771500699,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0,36.4871341923571,22.0993120230136,21.0833939483032,0,0,0,0,0,0.179060963239896,6.61302349561811,0.394061520403854,0,0.256686072559497,1.77866236955724,0,0,0.502548796003046,0,5.99205619157746,5.9832291840805,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,5.16920065307218,3.23571301227925,1.17400313583789,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,2.29632954224082,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,2.16386124460217,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,14.2085330585007,10.7049208999933,8.54470780761244,3.81170840732462,6.58179636937911,18.8057260245888,8.10047155857172,7.9312517629427,2.45695363593188,0,0,0,0,0,0,0.199579371432817,1.53204296105893,0,0,0.561594356226918,2.28234679033192,0.626719583092093,0,0.846458889008016,3.37234957717769,2.21979677910152,2.98092366383228,6.87010689511529,3.6868891717015,4.69719826574073,6.00656910162871,1.17232857241224,0,0,0,0,0,0.18714054040822,6.88588442577902,0,0,0,2.86493381685228,0.593929361665277,0,0,0.422008249231538,0,0,0,0.597743964753209,1.38141957765574,0,0.102268682502155,0.615424027305347,0,0,0,3.5810065915881,1.08507746200627,0,0,0,0.927680981618513,0,0,0,0,0,0.508507300585533,1.18193840883968,0,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0.230850775511391,0,8.0697366535821,0.269272933229316,0.217294743844016,20.0970730631109,7.23620987874712,34.6472604412113,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,2.96841450011276,0,0,0.176915129006678,0.611030144933625,0,0,0,1.61762719153625,0,0.234264445725339,0,0.391329237864179,0,0,0,0,4.04394109622323,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0.0730893170861856,0.0821154570532092,0.969890164884194,0,0,0.137041924646751,0,0.126621591911757,0.391102765469606,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0.203996435272644,0.866851769704557,1.20084057741958,0.958337652243951,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.399358000997982,1.28767814440971,0,0.268733889946905,0,0,0,0,0,0,0.338693328263138,2.38568906942791,0.953423842781029,0,0,0,0.2249738915515,0,0.364497339948148,0,1.57611414598396,0.681909645754975,0,0,0,0,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,1.32506888912221,0.904980694530854,0.66116300871345,0.342173675768659,1.40963004463334,4.37828391527548,1.57204305099666,2.07119527673598,2.48083010905975,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0.610131324509816,0.500763722825999,2.29363678276028,1.44207766997908,1.1177352529449,0,0,0,0.285465333544967,0,0,0,0.447764408660622,0,1.10961172300523,0.75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| |||
|short_description=p2@CCR1 | |||
}} |
Latest revision as of 10:26, 18 September 2015
Short description: | p2@CCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCR1_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000296140_5end |
EntrezGene: | CCR1 |
HGNC: | 1602 |
UniProt: | P32246 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.64e-80 | 72 |
monopoietic cell | 6.03e-77 | 59 |
monocyte | 6.03e-77 | 59 |
monoblast | 6.03e-77 | 59 |
promonocyte | 6.03e-77 | 59 |
macrophage dendritic cell progenitor | 8.64e-74 | 61 |
defensive cell | 5.77e-70 | 48 |
phagocyte | 5.77e-70 | 48 |
myeloid lineage restricted progenitor cell | 9.91e-67 | 66 |
granulocyte monocyte progenitor cell | 1.91e-65 | 67 |
classical monocyte | 2.04e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-60 | 42 |
myeloid cell | 3.28e-60 | 108 |
common myeloid progenitor | 3.28e-60 | 108 |
leukocyte | 5.15e-43 | 136 |
nongranular leukocyte | 4.12e-41 | 115 |
hematopoietic stem cell | 1.08e-39 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-38 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-38 | 161 |
hematopoietic cell | 2.14e-36 | 177 |
hematopoietic lineage restricted progenitor cell | 1.92e-34 | 120 |
granulocyte | 1.08e-11 | 8 |
mesenchymal cell | 1.37e-11 | 354 |
intermediate monocyte | 1.94e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.94e-11 | 9 |
connective tissue cell | 6.44e-11 | 361 |
macrophage | 1.29e-10 | 6 |
motile cell | 1.33e-08 | 386 |
blood cell | 5.26e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.52e-69 | 98 |
blood island | 2.52e-69 | 98 |
hemolymphoid system | 1.51e-62 | 108 |
bone marrow | 5.84e-60 | 76 |
bone element | 4.18e-54 | 82 |
immune system | 1.61e-52 | 93 |
skeletal element | 1.61e-47 | 90 |
skeletal system | 8.81e-41 | 100 |
lateral plate mesoderm | 6.90e-25 | 203 |
musculoskeletal system | 1.20e-17 | 167 |
mesoderm | 2.48e-11 | 315 |
mesoderm-derived structure | 2.48e-11 | 315 |
presumptive mesoderm | 2.48e-11 | 315 |
connective tissue | 1.58e-10 | 371 |
blood | 5.46e-10 | 15 |
haemolymphatic fluid | 5.46e-10 | 15 |
organism substance | 5.46e-10 | 15 |