FFCP PHASE2:Hg19::chr19:43530605..43530640,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5680,entrezgene:5675 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGN...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5680,5675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9516,9523 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UQ72 | ||
|association_with_transcript=0bp_to_ENST00000306322,ENST00000401740,ENST00000403486,ENST00000488205,NM_001113410,NM_002785,NM_203287,uc002ouw.2,uc002ovh.1,uc002ovk.1,uc002ovm.1,uc002ovn.1,uc002ovo.1,uc002ovp.1_5end | |association_with_transcript=0bp_to_ENST00000306322,ENST00000401740,ENST00000403486,ENST00000488205,NM_001113410,NM_002785,NM_203287,uc002ouw.2,uc002ovh.1,uc002ovk.1,uc002ovm.1,uc002ovn.1,uc002ovo.1,uc002ovp.1_5end | ||
|cluster_id=chr19:43530605..43530640,- | |cluster_id=chr19:43530605..43530640,- |
Latest revision as of 10:23, 18 September 2015
Short description: | p1@PSG11, p2@PSG6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG11_5end, CAGE_peak_2_at_PSG6_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000306322, ENST00000401740, ENST00000403486, ENST00000488205, NM_001113410, NM_002785, NM_203287, uc002ouw.2, uc002ovh.1, uc002ovk.1, uc002ovm.1, uc002ovn.1, uc002ovo.1, uc002ovp.1_5end |
EntrezGene: | 5680,5675 |
HGNC: | 9523&submit=Submit 9516, 9523 |
UniProt: | Q9UQ72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PSG11p2@PSG6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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chorionic membrane mesenchymal stem cell | 1.27e-33 | 3 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
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egg chorion | 1.27e-33 | 3 |
chorion | 2.08e-32 | 7 |
extraembryonic membrane | 1.26e-16 | 14 |
membranous layer | 1.26e-16 | 14 |
extraembryonic structure | 5.40e-10 | 24 |
placenta | 1.31e-07 | 4 |
allantois | 1.31e-07 | 4 |
Showing 1 to 7 of 7 entries