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FFCP PHASE2:Hg19::chr19:43530605..43530640,-: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5680,entrezgene:5675 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGN...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:5680,entrezgene:5675
|EntrezGene=5680,5675
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:9516,HGNC:9523
|HGNC=9516,9523
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:Q9UQ72
|UniProt=Q9UQ72
|association_with_transcript=0bp_to_ENST00000306322,ENST00000401740,ENST00000403486,ENST00000488205,NM_001113410,NM_002785,NM_203287,uc002ouw.2,uc002ovh.1,uc002ovk.1,uc002ovm.1,uc002ovn.1,uc002ovo.1,uc002ovp.1_5end
|association_with_transcript=0bp_to_ENST00000306322,ENST00000401740,ENST00000403486,ENST00000488205,NM_001113410,NM_002785,NM_203287,uc002ouw.2,uc002ovh.1,uc002ovk.1,uc002ovm.1,uc002ovn.1,uc002ovo.1,uc002ovp.1_5end
|cluster_id=chr19:43530605..43530640,-
|cluster_id=chr19:43530605..43530640,-

Latest revision as of 10:23, 18 September 2015

Short description:p1@PSG11, p2@PSG6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_PSG11_5end, CAGE_peak_2_at_PSG6_5end
Coexpression cluster:C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile
Association with transcript: 0bp_to_ENST00000306322, ENST00000401740, ENST00000403486, ENST00000488205, NM_001113410, NM_002785, NM_203287, uc002ouw.2, uc002ovh.1, uc002ovk.1, uc002ovm.1, uc002ovn.1, uc002ovo.1, uc002ovp.1_5end
EntrezGene:5680,5675
HGNC: 9523&submit=Submit 9516, 9523
UniProt: Q9UQ72
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data