FFCP PHASE1:Hg19::chr12:46121579..46121601,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:46121579..46121601,-
|short_description=p6@LOC400027
|description=CAGE_peak_6_at_LOC400027_5end
|association_with_transcript=-49bp_to_uc001roq.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=400027 | |EntrezGene=400027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_uc001roq.2_5end | |||
|cluster_id=chr12:46121579..46121601,- | |||
|description=CAGE_peak_6_at_LOC400027_5end | |||
|id=chr12:46121579..46121601,- | |||
|ontology_enrichment_celltype=CL:0000791!3.88e-07!18;CL:0000789!3.88e-07!18;CL:0002420!3.88e-07!18;CL:0002419!3.88e-07!18;CL:0000790!3.88e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.76e-08;18!CL:0000789;5.76e-08;18!CL:0002419;5.76e-08;18!CL:0000625;6.50e-07;11!CL:0000084;7.61e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.73e-08,52;CL:0000791,3.85e-08,18;CL:0000789,3.85e-08,18;CL:0002420,3.85e-08,18;CL:0002419,3.85e-08,18;CL:0000790,3.85e-08,18;CL:0000542,7.09e-08,53;CL:0000051,7.09e-08,53;CL:0000625,4.09e-07,11;CL:0000084,6.07e-07,25;CL:0000827,6.07e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;5.76e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@LOC400027 | |||
}} | }} |
Latest revision as of 10:05, 18 September 2015
Short description: | p6@LOC400027 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LOC400027_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_uc001roq.2_5end |
EntrezGene: | LOC400027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.73e-08 | 52 |
mature alpha-beta T cell | 3.85e-08 | 18 |
alpha-beta T cell | 3.85e-08 | 18 |
immature T cell | 3.85e-08 | 18 |
mature T cell | 3.85e-08 | 18 |
immature alpha-beta T cell | 3.85e-08 | 18 |
lymphocyte | 7.09e-08 | 53 |
common lymphoid progenitor | 7.09e-08 | 53 |
CD8-positive, alpha-beta T cell | 4.09e-07 | 11 |
T cell | 6.07e-07 | 25 |
pro-T cell | 6.07e-07 | 25 |