FFCP PHASE1:Hg19::chr12:46121263..46121286,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:46121263..46121286,- to FFCP PHASE1:Hg19::chr12:46121263..46121286,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=400027 | |EntrezGene=400027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=417bp_to_NR_028408_5end | |||
|cluster_id=chr12:46121263..46121286,- | |||
|description=CAGE_peak_2_at_LOC400027_5end | |||
|id=chr12:46121263..46121286,- | |||
|ontology_enrichment_celltype=CL:0000037!3.04e-24!172;CL:0000566!3.04e-24!172;CL:0000988!1.52e-21!182;CL:0002032!2.81e-21!165;CL:0000837!2.81e-21!165;CL:0000738!4.59e-21!140;CL:0002031!9.35e-19!124;CL:0002087!1.24e-17!119;CL:0000542!9.77e-15!53;CL:0000051!9.77e-15!53;CL:0000838!1.00e-14!52;CL:0000763!1.40e-08!112;CL:0000049!1.40e-08!112;CL:0000084!4.87e-08!25;CL:0000827!4.87e-08!25;CL:0000791!4.91e-08!18;CL:0000789!4.91e-08!18;CL:0002420!4.91e-08!18;CL:0002419!4.91e-08!18;CL:0000790!4.91e-08!18;CL:0002057!1.15e-07!42;CL:0000860!2.02e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.03e-10;53!CL:0000084;9.58e-09;25!CL:0000791;1.63e-08;18!CL:0000789;1.63e-08;18!CL:0002419;1.63e-08;18!CL:0002087;2.00e-07;104!CL:0000945;8.09e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.17e-26,168;CL:0000988,2.72e-24,177;CL:0000738,9.61e-24,136;CL:0002032,2.19e-23,161;CL:0000837,2.19e-23,161;CL:0002031,1.48e-20,120;CL:0002087,1.36e-19,115;CL:0000542,5.68e-16,53;CL:0000051,5.68e-16,53;CL:0000838,5.84e-16,52;CL:0000763,2.28e-09,108;CL:0000049,2.28e-09,108;CL:0000084,1.20e-08,25;CL:0000827,1.20e-08,25;CL:0000791,1.21e-08,18;CL:0000789,1.21e-08,18;CL:0002420,1.21e-08,18;CL:0002419,1.21e-08,18;CL:0000790,1.21e-08,18;CL:0000860,4.68e-08,42;CL:0002057,4.68e-08,42;CL:0000557,3.79e-07,67;CL:0000945,4.04e-07,24;CL:0000826,4.04e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;8.03e-10;53!CL:0000790;1.63e-08;18!UBERON:0006601;2.04e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-29!115;UBERON:0001049!2.89e-23!57;UBERON:0005068!2.89e-23!57;UBERON:0006241!2.89e-23!57;UBERON:0007135!2.89e-23!57;UBERON:0001017!4.32e-20!82;UBERON:0002780!1.89e-19!41;UBERON:0001890!1.89e-19!41;UBERON:0006240!1.89e-19!41;UBERON:0003080!2.36e-19!42;UBERON:0005743!3.96e-19!86;UBERON:0002616!2.08e-18!59;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0000955!1.44e-17!69;UBERON:0006238!1.44e-17!69;UBERON:0002020!9.64e-16!34;UBERON:0003528!9.64e-16!34;UBERON:0002346!1.06e-15!90;UBERON:0001893!3.25e-15!34;UBERON:0002791!5.08e-15!33;UBERON:0003075!1.10e-14!86;UBERON:0007284!1.10e-14!86;UBERON:0001869!2.79e-14!32;UBERON:0002619!2.60e-11!22;UBERON:0003056!3.91e-11!61;UBERON:0000956!8.03e-11!25;UBERON:0000203!8.03e-11!25;UBERON:0001950!3.67e-10!20;UBERON:0000153!3.63e-09!129;UBERON:0007811!3.63e-09!129;UBERON:0000924!9.85e-08!173;UBERON:0006601!9.85e-08!173;UBERON:0000033!1.37e-07!123;UBERON:0002390!2.42e-07!102;UBERON:0003061!2.42e-07!102;UBERON:0004121!4.69e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.42e-15;41!UBERON:0001890;1.42e-15;41!UBERON:0003528;1.24e-14;34!UBERON:0002020;1.24e-14;34!UBERON:0002791;1.75e-14;32!UBERON:0001869;4.15e-14;32!UBERON:0001893;5.08e-14;34!UBERON:0000073;2.45e-13;53!UBERON:0002616;2.45e-13;53!UBERON:0002619;2.67e-12;22!UBERON:0000956;1.28e-11;25!UBERON:0000203;1.28e-11;25!UBERON:0001950;4.95e-11;20!UBERON:0007023;3.10e-09;114!UBERON:0001017;1.06e-08;75!UBERON:0000955;1.21e-08;68!UBERON:0001016;2.44e-08;83!UBERON:0000125;3.65e-07;9!UBERON:0002308;3.65e-07;9!UBERON:0002420;6.75e-07;9!UBERON:0007245;6.75e-07;9!UBERON:0010009;6.75e-07;9!UBERON:0010011;6.75e-07;9!UBERON:0000454;6.75e-07;9 | |||
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| ||
|short_description=p2@LOC400027 | |||
}} | }} |
Latest revision as of 10:01, 18 September 2015
Short description: | p2@LOC400027 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC400027_5end |
Coexpression cluster: | NA |
Association with transcript: | 417bp_to_NR_028408_5end |
EntrezGene: | LOC400027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.17e-26 | 168 |
hematopoietic cell | 2.72e-24 | 177 |
leukocyte | 9.61e-24 | 136 |
hematopoietic oligopotent progenitor cell | 2.19e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 1.48e-20 | 120 |
nongranular leukocyte | 1.36e-19 | 115 |
lymphocyte | 5.68e-16 | 53 |
common lymphoid progenitor | 5.68e-16 | 53 |
lymphoid lineage restricted progenitor cell | 5.84e-16 | 52 |
myeloid cell | 2.28e-09 | 108 |
common myeloid progenitor | 2.28e-09 | 108 |
T cell | 1.20e-08 | 25 |
pro-T cell | 1.20e-08 | 25 |
mature alpha-beta T cell | 1.21e-08 | 18 |
alpha-beta T cell | 1.21e-08 | 18 |
immature T cell | 1.21e-08 | 18 |
mature T cell | 1.21e-08 | 18 |
immature alpha-beta T cell | 1.21e-08 | 18 |
classical monocyte | 4.68e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.68e-08 | 42 |
granulocyte monocyte progenitor cell | 3.79e-07 | 67 |
lymphocyte of B lineage | 4.04e-07 | 24 |
pro-B cell | 4.04e-07 | 24 |