FFCP PHASE1:Hg19::chr9:97401753..97401760,-: Difference between revisions
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|id=chr9:97401753..97401760,-
|short_description=p3@FBP1
|description=CAGE_peak_3_at_FBP1_5end
|association_with_transcript=28bp_to_ENST00000375326_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2203 | |EntrezGene=2203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3606 | |HGNC=3606 | ||
|TSSclassifier=strong | |||
|UniProt=P09467 | |UniProt=P09467 | ||
|association_with_transcript=28bp_to_ENST00000375326_5end | |||
|cluster_id=chr9:97401753..97401760,- | |||
|description=CAGE_peak_3_at_FBP1_5end | |||
|id=chr9:97401753..97401760,- | |||
|ontology_enrichment_celltype=CL:0002057!2.14e-51!42;CL:0002194!5.02e-50!63;CL:0000576!5.02e-50!63;CL:0000040!5.02e-50!63;CL:0000559!5.02e-50!63;CL:0002009!4.85e-48!65;CL:0000839!1.89e-47!70;CL:0000860!4.03e-47!45;CL:0000766!1.32e-46!76;CL:0000557!1.43e-46!71;CL:0000763!4.56e-28!112;CL:0000049!4.56e-28!112;CL:0002087!2.69e-25!119;CL:0000738!2.60e-23!140;CL:0002031!1.80e-22!124;CL:0000037!5.77e-17!172;CL:0000566!5.77e-17!172;CL:0002032!7.71e-16!165;CL:0000837!7.71e-16!165;CL:0000988!3.47e-15!182;CL:0002393!9.47e-15!9;CL:0002397!9.47e-15!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.82e-23;39!CL:0000234;7.82e-23;39!CL:0000235;2.65e-18;6!CL:0000860;2.08e-15;33!CL:0002057;2.08e-15;33!CL:0000576;2.19e-15;48!CL:0000766;1.06e-12;69!CL:0000763;5.23e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.19e-39,48;CL:0000234,3.19e-39,48;CL:0002194,2.73e-36,59;CL:0000576,2.73e-36,59;CL:0000040,2.73e-36,59;CL:0000559,2.73e-36,59;CL:0002009,6.35e-35,61;CL:0000839,7.30e-32,66;CL:0000557,2.64e-31,67;CL:0000766,9.58e-29,72;CL:0000860,2.25e-26,42;CL:0002057,2.25e-26,42;CL:0000235,2.52e-18,6;CL:0000763,2.85e-17,108;CL:0000049,2.85e-17,108;CL:0002087,7.13e-16,115;CL:0002031,5.64e-15,120;CL:0000738,1.51e-12,136;CL:0002393,8.92e-11,9;CL:0002397,8.92e-11,9;CL:0002032,9.77e-10,161;CL:0000837,9.77e-10,161;CL:0000037,4.20e-09,168;CL:0000988,2.30e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.54e-18;42!CL:0000049;7.90e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.44e-10;4!DOID:1612;2.44e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.37e-10,4;DOID:1612,2.37e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.22e-39!80;UBERON:0001474!7.90e-36!86;UBERON:0002390!1.35e-33!102;UBERON:0003061!1.35e-33!102;UBERON:0002405!5.11e-32!115;UBERON:0002193!1.40e-30!112;UBERON:0004765!2.63e-28!101;UBERON:0001434!2.63e-28!101;UBERON:0002204!1.67e-12!167;UBERON:0003081!7.21e-10!216;UBERON:0000062!1.17e-08!511;UBERON:0007023!2.69e-07!115;UBERON:0000926!3.54e-07!448;UBERON:0004120!3.54e-07!448;UBERON:0006603!3.54e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.67e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.16e-27,76;UBERON:0001474,1.49e-24,82;UBERON:0004765,7.25e-22,90;UBERON:0002405,5.62e-21,93;UBERON:0002390,1.29e-19,98;UBERON:0003061,1.29e-19,98;UBERON:0001434,4.14e-19,100;UBERON:0002193,2.85e-17,108;UBERON:0002204,3.16e-10,167;UBERON:0002108,1.59e-08,4 | |||
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| ||
|short_description=p3@FBP1 | |||
}} | }} |
Latest revision as of 09:58, 18 September 2015
Short description: | p3@FBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000375326_5end |
EntrezGene: | FBP1 |
HGNC: | 3606 |
UniProt: | P09467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.19e-39 | 48 |
phagocyte | 3.19e-39 | 48 |
monopoietic cell | 2.73e-36 | 59 |
monocyte | 2.73e-36 | 59 |
monoblast | 2.73e-36 | 59 |
promonocyte | 2.73e-36 | 59 |
macrophage dendritic cell progenitor | 6.35e-35 | 61 |
myeloid lineage restricted progenitor cell | 7.30e-32 | 66 |
granulocyte monocyte progenitor cell | 2.64e-31 | 67 |
myeloid leukocyte | 9.58e-29 | 72 |
classical monocyte | 2.25e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-26 | 42 |
macrophage | 2.52e-18 | 6 |
myeloid cell | 2.85e-17 | 108 |
common myeloid progenitor | 2.85e-17 | 108 |
nongranular leukocyte | 7.13e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.64e-15 | 120 |
leukocyte | 1.51e-12 | 136 |
intermediate monocyte | 8.92e-11 | 9 |
CD14-positive, CD16-positive monocyte | 8.92e-11 | 9 |
hematopoietic oligopotent progenitor cell | 9.77e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.77e-10 | 161 |
hematopoietic stem cell | 4.20e-09 | 168 |
hematopoietic cell | 2.30e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.16e-27 | 76 |
bone element | 1.49e-24 | 82 |
skeletal element | 7.25e-22 | 90 |
immune system | 5.62e-21 | 93 |
hematopoietic system | 1.29e-19 | 98 |
blood island | 1.29e-19 | 98 |
skeletal system | 4.14e-19 | 100 |
hemolymphoid system | 2.85e-17 | 108 |
musculoskeletal system | 3.16e-10 | 167 |
small intestine | 1.59e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.37e-10 | 4 |
breast cancer | 2.37e-10 | 4 |