FFCP PHASE1:Hg19::chr16:88752861..88752884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=333929 | |EntrezGene=333929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18411 | |HGNC=18411 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KNW1 | |UniProt=Q3KNW1 | ||
|association_with_transcript=0bp_to_ENST00000332281,NM_178310,uc002flj.2_5end | |association_with_transcript=0bp_to_ENST00000332281,NM_178310,uc002flj.2_5end | ||
|cluster_id=chr16:88752861..88752884,- | |||
|description=CAGE_peak_2_at_SNAI3_5end | |description=CAGE_peak_2_at_SNAI3_5end | ||
|id=chr16:88752861..88752884,- | |id=chr16:88752861..88752884,- | ||
|ontology_enrichment_celltype=CL:0000037!1.46e-46!172;CL:0000566!1.46e-46!172;CL:0002032!4.60e-46!165;CL:0000837!4.60e-46!165;CL:0000988!1.01e-41!182;CL:0000738!2.23e-41!140;CL:0002031!2.27e-36!124;CL:0002087!3.15e-34!119;CL:0000763!8.58e-33!112;CL:0000049!8.58e-33!112;CL:0000766!8.05e-28!76;CL:0000557!2.24e-24!71;CL:0000839!6.99e-23!70;CL:0002009!5.32e-22!65;CL:0002194!6.50e-21!63;CL:0000576!6.50e-21!63;CL:0000040!6.50e-21!63;CL:0000559!6.50e-21!63;CL:0002057!1.21e-13!42;CL:0000860!5.07e-13!45;CL:0000838!3.98e-12!52;CL:0000542!1.26e-11!53;CL:0000051!1.26e-11!53;CL:0000791!1.84e-09!18;CL:0000789!1.84e-09!18;CL:0002420!1.84e-09!18;CL:0002419!1.84e-09!18;CL:0000790!1.84e-09!18;CL:0000625!2.75e-08!11;CL:0000094!5.45e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.46e-46!172;CL:0000566!1.46e-46!172;CL:0002032!4.60e-46!165;CL:0000837!4.60e-46!165;CL:0000988!1.01e-41!182;CL:0000738!2.23e-41!140;CL:0002031!2.27e-36!124;CL:0002087!3.15e-34!119;CL:0000763!8.58e-33!112;CL:0000049!8.58e-33!112;CL:0000766!8.05e-28!76;CL:0000557!2.24e-24!71;CL:0000839!6.99e-23!70;CL:0002009!5.32e-22!65;CL:0002194!6.50e-21!63;CL:0000576!6.50e-21!63;CL:0000040!6.50e-21!63;CL:0000559!6.50e-21!63;CL:0002057!1.21e-13!42;CL:0000860!5.07e-13!45;CL:0000838!3.98e-12!52;CL:0000542!1.26e-11!53;CL:0000051!1.26e-11!53;CL:0000791!1.84e-09!18;CL:0000789!1.84e-09!18;CL:0002420!1.84e-09!18;CL:0002419!1.84e-09!18;CL:0000790!1.84e-09!18;CL:0000625!2.75e-08!11;CL:0000094!5.45e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000766;9.24e-12;69!CL:0000094;1.49e-11;8!CL:0000738;2.77e-11;136!CL:0000576;1.09e-10;48!CL:0000625;3.63e-10;11!CL:0000473;4.28e-10;39!CL:0000234;4.28e-10;39!CL:0000840;1.15e-09;5!CL:0000763;2.02e-09;100!CL:0000791;3.05e-08;18!CL:0000789;3.05e-08;18!CL:0002419;3.05e-08;18!CL:0000081;6.05e-08;11!CL:0000860;9.74e-08;33!CL:0002057;9.74e-08;33!CL:0000988;1.08e-07;177!CL:0002087;1.09e-07;104!CL:0000235;5.60e-07;6!CL:0000236;9.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.06e-48,168;CL:0002032,7.32e-47,161;CL:0000837,7.32e-47,161;CL:0000738,1.22e-44,136;CL:0000988,2.25e-44,177;CL:0002031,1.40e-35,120;CL:0000763,4.85e-35,108;CL:0000049,4.85e-35,108;CL:0002087,6.88e-35,115;CL:0000766,7.72e-33,72;CL:0000557,3.88e-27,67;CL:0002009,6.87e-24,61;CL:0000839,4.26e-23,66;CL:0002194,4.23e-22,59;CL:0000576,4.23e-22,59;CL:0000040,4.23e-22,59;CL:0000559,4.23e-22,59;CL:0000473,3.35e-13,48;CL:0000234,3.35e-13,48;CL:0000094,7.13e-12,8;CL:0000838,5.74e-11,52;CL:0000134,6.96e-11,354;CL:0000542,1.24e-10,53;CL:0000051,1.24e-10,53;CL:0002320,2.94e-10,361;CL:0000625,2.97e-10,11;CL:0000840,1.47e-09,5;CL:0001029,1.47e-09,5;CL:0000860,2.97e-09,42;CL:0002057,2.97e-09,42;CL:0000791,3.10e-08,18;CL:0000789,3.10e-08,18;CL:0002420,3.10e-08,18;CL:0002419,3.10e-08,18;CL:0000790,3.10e-08,18;CL:0000081,3.64e-08,11;CL:0000219,4.19e-08,386;CL:0000235,9.88e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000049;2.45e-10;108!CL:0000790;3.05e-08;18!CL:0002057;8.86e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.50e-28!102;UBERON:0003061!7.50e-28!102;UBERON:0002193!4.19e-25!112;UBERON:0002371!3.60e-20!80;UBERON:0001474!1.04e-17!86;UBERON:0007023!5.76e-13!115;UBERON:0002405!8.36e-13!115;UBERON:0004765!3.11e-12!101;UBERON:0001434!3.11e-12!101;UBERON:0000178!3.70e-07!15;UBERON:0000179!3.70e-07!15;UBERON:0000463!3.70e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-13;15!UBERON:0000179;1.03e-13;15!UBERON:0000463;1.03e-13;15!UBERON:0002390;1.17e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-34,98;UBERON:0003061,1.04e-34,98;UBERON:0002193,2.98e-31,108;UBERON:0002371,4.44e-24,76;UBERON:0001474,2.14e-21,82;UBERON:0002405,9.79e-21,93;UBERON:0004765,2.15e-18,90;UBERON:0001434,2.37e-15,100;UBERON:0000178,1.07e-13,15;UBERON:0000179,1.07e-13,15;UBERON:0000463,1.07e-13,15;UBERON:0003081,7.58e-10,203;UBERON:0002384,2.05e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.236132343941038,2.36018566109342,1.53531759238885,1.70297735647684,0,0,0,0.542270404062111,0.142169232487422,0,1.66198622559563,3.00816671205213,1.30206522429511,2.46307021663917,2.91504299417082,2.57575567634187,4.21654892460738,6.80176698639857,1.4555043671269,1.16214518452842,1.23350366406548,0.929119112685311,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,1.35426486594342,1.31769637679823,1.09162460023138,0.674170453335254,0.612167784741805,0.962787081228281,0,0.329851300186716,2.19410023383795,0.852449501065388,1.16083695451434,1.13477044938228,0,1.7587406567972,1.5644487552606,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,1.26753171787165,0.637812899895131,0.419317291016752,3.25753030324836,1.65194582125657,1.6072558669708,0,0.59675003159727,0,5.27988733383968,2.73069305631066,2.66852776159066,3.41384178053206,3.2031678962881,3.4485146397269,1.98313461835459,2.86216126360609,0,0,0,1.32171328579026,1.12101712596307,0,0.786839080455332,0.786021525498329,0.411202997999018,13.7092926220356,0.32592226663359,0,0,6.12757512868455,1.17842362989935,5.09527957542329,0.812411591295047,16.0114149657094,8.06367954871245,4.60426132890293,1.10540007114339,3.47763702882063,1.33457906845854,0.802622484269139,1.04535523804977,7.0251792472491,3.06576394881537,4.12352934579156,1.26509846009751,4.45991580053735,2.60433381542567,1.90090408889675,2.40920190524436,2.8157054453972,2.49861453104692,3.31488152861624,4.10563998460523,0.80642697289893,0.802320587350522,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.851363990735132,0,0,5.8418530857843,9.0547463395619,9.1740992758017,1.43094374583205,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.530119073285941,0.464775771478074,0.829288440122964,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,1.58040879591855,0.858486162094873,0.738651018262192,9.82817913584798,3.12125440806329,0,0,0.141775097242386,0,0,0,3.94130590316755,8.62874653329615,1.24396869324463,0,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,1.97030760201927,2.58753089831421,2.95188983443421,0,0,0,0,0,3.74503511973591,2.99161459204025,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,3.10152039184331,1.07857100409308,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.470719003883896,0,0,0,0,3.55213326462519,4.58782324285425,3.98753031021914,2.85878130549347,4.11362273086194,5.18778648954174,3.7802200606668,4.75875105776562,0.320472213382419,0,0,0,0,0,0,0.399158742865633,4.40462351304443,1.05836791361941,1.29848776109822,1.12318871245384,2.28234679033192,0.156679895773023,5.01268954180134,9.48033955688978,4.33587802779989,3.22879531505676,0.425846237690326,0,1.53620382154229,2.01308497103174,3.8375302593739,2.73543333562856,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0.281338832821026,0,0,0,0,0.828851746593443,0.251932747854276,0.102268682502155,0.492339221844278,0,0.0898683511473268,0.179021174675609,1.02314474045374,0.394573622547734,2.3948309234694,0,0,0.371072392647405,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.361789315876224,1.52581736317083,0,0,0.438770794307945,0,0.139423744278603,0.153900517007594,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0.0915975934018623,0,0,0.941881538370149,0,0.225595660617181,0.588187602953219,0.503464760927528,0,0.476809736941136,0,0,0.989471500037586,0,0,1.41532103205343,0.611030144933625,0,0,0,0.741412462787447,2.40773294189637,0.234264445725339,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0.442306057399416,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0.694238953340524,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.484945082442097,0.176512253383001,1.35588444468319,0,0,0.189932387867636,0.195551382734803,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,3.83239764200917,0,0.525774708558629,0.279282401272254,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0.817220436669454,0.643012593860077,2.06309154895851,1.66176135211674,1.12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|short_description=p2@SNAI3 | |short_description=p2@SNAI3 | ||
}} | }} |
Latest revision as of 09:56, 18 September 2015
Short description: | p2@SNAI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNAI3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332281, NM_178310, uc002flj.2_5end |
EntrezGene: | SNAI3 |
HGNC: | 18411 |
UniProt: | Q3KNW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-34 | 98 |
blood island | 1.04e-34 | 98 |
hemolymphoid system | 2.98e-31 | 108 |
bone marrow | 4.44e-24 | 76 |
bone element | 2.14e-21 | 82 |
immune system | 9.79e-21 | 93 |
skeletal element | 2.15e-18 | 90 |
skeletal system | 2.37e-15 | 100 |
blood | 1.07e-13 | 15 |
haemolymphatic fluid | 1.07e-13 | 15 |
organism substance | 1.07e-13 | 15 |
lateral plate mesoderm | 7.58e-10 | 203 |
connective tissue | 2.05e-09 | 371 |