FFCP PHASE1:Hg19::chr16:88752836..88752852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=333929 | |EntrezGene=333929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18411 | |HGNC=18411 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KNW1 | |UniProt=Q3KNW1 | ||
|association_with_transcript=29bp_to_ENST00000332281,NM_178310,uc002flj.2_5end | |association_with_transcript=29bp_to_ENST00000332281,NM_178310,uc002flj.2_5end | ||
|cluster_id=chr16:88752836..88752852,- | |||
|description=CAGE_peak_3_at_SNAI3_5end | |description=CAGE_peak_3_at_SNAI3_5end | ||
|id=chr16:88752836..88752852,- | |id=chr16:88752836..88752852,- | ||
|ontology_enrichment_celltype=CL:0000037!3.58e-42!172;CL:0000566!3.58e-42!172;CL:0002032!5.43e-41!165;CL:0000837!5.43e-41!165;CL:0000738!2.03e-37!140;CL:0000988!2.16e-37!182;CL:0002087!1.28e-30!119;CL:0002031!2.42e-30!124;CL:0000763!9.21e-28!112;CL:0000049!9.21e-28!112;CL:0000766!1.83e-24!76;CL:0000557!1.01e-20!71;CL:0000839!1.21e-18!70;CL:0002009!4.69e-17!65;CL:0002194!7.81e-17!63;CL:0000576!7.81e-17!63;CL:0000040!7.81e-17!63;CL:0000559!7.81e-17!63;CL:0002057!4.69e-12!42;CL:0000542!9.86e-12!53;CL:0000051!9.86e-12!53;CL:0000838!2.36e-11!52;CL:0000860!1.57e-10!45 | |ontology_enrichment_celltype=CL:0000037!3.58e-42!172;CL:0000566!3.58e-42!172;CL:0002032!5.43e-41!165;CL:0000837!5.43e-41!165;CL:0000738!2.03e-37!140;CL:0000988!2.16e-37!182;CL:0002087!1.28e-30!119;CL:0002031!2.42e-30!124;CL:0000763!9.21e-28!112;CL:0000049!9.21e-28!112;CL:0000766!1.83e-24!76;CL:0000557!1.01e-20!71;CL:0000839!1.21e-18!70;CL:0002009!4.69e-17!65;CL:0002194!7.81e-17!63;CL:0000576!7.81e-17!63;CL:0000040!7.81e-17!63;CL:0000559!7.81e-17!63;CL:0002057!4.69e-12!42;CL:0000542!9.86e-12!53;CL:0000051!9.86e-12!53;CL:0000838!2.36e-11!52;CL:0000860!1.57e-10!45 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.18e-14;8!CL:0000081;5.29e-10;11!CL:0002393;2.17e-09;6!CL:0002397;2.17e-09;6!CL:0000775;1.53e-08;3!CL:0000766;9.54e-08;69!CL:0000738;1.60e-07;136!CL:0000767;3.42e-07;3!CL:0000623;3.42e-07;3!CL:0000840;8.19e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.78e-26,168;CL:0002032,5.86e-25,161;CL:0000837,5.86e-25,161;CL:0000738,7.33e-25,136;CL:0000988,5.50e-24,177;CL:0000766,2.05e-23,72;CL:0000763,5.52e-23,108;CL:0000049,5.52e-23,108;CL:0000557,4.87e-17,67;CL:0002031,7.21e-17,120;CL:0002087,7.62e-17,115;CL:0002009,1.76e-14,61;CL:0000094,2.24e-14,8;CL:0000839,2.91e-14,66;CL:0002194,1.33e-13,59;CL:0000576,1.33e-13,59;CL:0000040,1.33e-13,59;CL:0000559,1.33e-13,59;CL:0000473,2.69e-10,48;CL:0000234,2.69e-10,48;CL:0000081,4.13e-10,11;CL:0000775,1.57e-08,3;CL:0000623,1.61e-07,3;CL:0000825,1.61e-07,3;CL:0000767,2.26e-07,3;CL:0000860,5.01e-07,42;CL:0002057,5.01e-07,42;CL:0000840,5.53e-07,5;CL:0001029,5.53e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.20e-26!102;UBERON:0003061!4.20e-26!102;UBERON:0002193!1.96e-23!112;UBERON:0002371!3.29e-18!80;UBERON:0001474!1.38e-15!86;UBERON:0002405!1.15e-13!115;UBERON:0004765!1.40e-11!101;UBERON:0001434!1.40e-11!101;UBERON:0007023!9.29e-11!115 | |ontology_enrichment_uberon=UBERON:0002390!4.20e-26!102;UBERON:0003061!4.20e-26!102;UBERON:0002193!1.96e-23!112;UBERON:0002371!3.29e-18!80;UBERON:0001474!1.38e-15!86;UBERON:0002405!1.15e-13!115;UBERON:0004765!1.40e-11!101;UBERON:0001434!1.40e-11!101;UBERON:0007023!9.29e-11!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.23e-09;15!UBERON:0000179;5.23e-09;15!UBERON:0000463;5.23e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.89e-22,98;UBERON:0003061,4.89e-22,98;UBERON:0002193,2.45e-20,108;UBERON:0002371,1.20e-15,76;UBERON:0001474,5.76e-14,82;UBERON:0002405,1.22e-13,93;UBERON:0004765,4.37e-12,90;UBERON:0001434,3.55e-10,100;UBERON:0000178,2.31e-09,15;UBERON:0000179,2.31e-09,15;UBERON:0000463,2.31e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.328402357799783,0.0787107813136792,1.57345710739562,1.91914699048606,1.08371286321253,0,0,0,0.46480320348181,0.710846162437108,0.293600439334847,3.87796785972314,1.80490002723128,1.08505435357926,0.895661896959697,0.32389366601898,1.54545340580512,1.45398238779565,0.377875943688809,0.727752183563449,0.697287110717054,0.822335776043652,0.619412741790207,0.863077176966451,0.256160706529101,0,0.689491361473237,1.29096936716765,0,0.752969358170419,0.545812300115692,0,1.53041946185451,0.641858054152187,0,0.659702600373432,0.398927315243264,0,0,1.13477044938228,0,0.502497330513487,1.0429658368404,0,0,1.10483290796269,0.316462387440884,1.05627643155971,0.637812899895131,1.25795187305026,3.03287304095537,1.80212271409808,1.44653028027372,0,0.19891667719909,0,1.75996244461323,2.18455444504853,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,3.00935691703221,0.32592226663359,0.473447805734733,0,0.668462741311041,1.17842362989935,0.664601683750863,1.08321545506006,3.5865569523189,1.56071217071854,1.47994114143309,0.276350017785848,1.73881851441031,0.296573126324121,0.267540828089713,0,1.13309342697566,1.53288197440768,1.37450978193052,0.253019692019503,2.22995790026868,0,0,2.10805166708882,0.895906278080929,0,1.65744076430812,0.821127996921047,0.604820229674197,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0.364295288292542,0.370784442784429,1.9472843619281,2.08955684759121,2.26028532882071,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,10.5424333948851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,1.19276791489337,0.580969714347592,0.932949495138334,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63802985597466,1.0404181360211,0,0,0,0,0,0,1.47798971368783,3.16974362447614,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,1.37921532141349,1.2937654491571,1.92514554419623,0,0,0,0,0,6.74106321552464,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,0.647142602455851,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.55213326462519,0,1.70894156152249,1.66762242820452,0.411362273086194,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0.371606350251437,0,0,0,0.199579371432817,1.53204296105893,0.423347165447766,0,0.561594356226918,1.59764275323235,0,0,3.21654377823046,1.2847046008296,1.21079824314629,0.425846237690326,0,0.307240764308458,0.223676107892416,1.33479313369527,1.9538809540204,0.278406173895242,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,1.10513566212459,0,0,0.246169610922139,0,0.0898683511473268,0,0.511572370226872,0,4.7896618469388,0,0.969332746095218,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0.278847488557207,0.153900517007594,0,0,0.0897576444097721,0.325942115766024,0,0,0,0,0.470940769185074,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.606610196826093,1.60515529459758,0.234264445725339,0.182454789215666,0,0,0,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.410716136675979,2.55493176133945,0,0.525774708558629,0.279282401272254,0,0,0,0.429226048136571,0.669514372325618,0.201550417460179,0,1.16495949527454,0,0,0,0,0.0846733320657845,1.59045937961861,0.408610218334727,1.28602518772015,1.51293380256957,1.24632101408756,0,3.0952078182318,0.242998226632099,0.335434687599266,0.236417121897595,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.258565912723101,0,0,0,0.320362237703084,0.157204305099666,1.24271716604159,0.992332043623902,0.790446527591777,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0,0,0,0,0.1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| ||
|short_description=p3@SNAI3 | |short_description=p3@SNAI3 | ||
}} | }} |
Latest revision as of 09:55, 18 September 2015
Short description: | p3@SNAI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNAI3_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000332281, NM_178310, uc002flj.2_5end |
EntrezGene: | SNAI3 |
HGNC: | 18411 |
UniProt: | Q3KNW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.78e-26 | 168 |
hematopoietic oligopotent progenitor cell | 5.86e-25 | 161 |
hematopoietic multipotent progenitor cell | 5.86e-25 | 161 |
leukocyte | 7.33e-25 | 136 |
hematopoietic cell | 5.50e-24 | 177 |
myeloid leukocyte | 2.05e-23 | 72 |
myeloid cell | 5.52e-23 | 108 |
common myeloid progenitor | 5.52e-23 | 108 |
granulocyte monocyte progenitor cell | 4.87e-17 | 67 |
hematopoietic lineage restricted progenitor cell | 7.21e-17 | 120 |
nongranular leukocyte | 7.62e-17 | 115 |
macrophage dendritic cell progenitor | 1.76e-14 | 61 |
granulocyte | 2.24e-14 | 8 |
myeloid lineage restricted progenitor cell | 2.91e-14 | 66 |
monopoietic cell | 1.33e-13 | 59 |
monocyte | 1.33e-13 | 59 |
monoblast | 1.33e-13 | 59 |
promonocyte | 1.33e-13 | 59 |
defensive cell | 2.69e-10 | 48 |
phagocyte | 2.69e-10 | 48 |
blood cell | 4.13e-10 | 11 |
neutrophil | 1.57e-08 | 3 |
natural killer cell | 1.61e-07 | 3 |
pro-NK cell | 1.61e-07 | 3 |
basophil | 2.26e-07 | 3 |
classical monocyte | 5.01e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.01e-07 | 42 |
immature conventional dendritic cell | 5.53e-07 | 5 |
common dendritic progenitor | 5.53e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.89e-22 | 98 |
blood island | 4.89e-22 | 98 |
hemolymphoid system | 2.45e-20 | 108 |
bone marrow | 1.20e-15 | 76 |
bone element | 5.76e-14 | 82 |
immune system | 1.22e-13 | 93 |
skeletal element | 4.37e-12 | 90 |
skeletal system | 3.55e-10 | 100 |
blood | 2.31e-09 | 15 |
haemolymphatic fluid | 2.31e-09 | 15 |
organism substance | 2.31e-09 | 15 |