FFCP PHASE1:Hg19::chr2:17721937..17721990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7447 | |EntrezGene=7447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12722 | |HGNC=12722 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE24 | |UniProt=E9PE24 | ||
|association_with_transcript=0bp_to_ENST00000451533,ENST00000483921_5end | |association_with_transcript=0bp_to_ENST00000451533,ENST00000483921_5end | ||
|cluster_id=chr2:17721937..17721990,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_VSNL1_5end | |description=CAGE_peak_1_at_VSNL1_5end | ||
|id=chr2:17721937..17721990,+ | |id=chr2:17721937..17721990,+ | ||
|ontology_enrichment_celltype=CL:0000223!5.62e-08!59;CL:0002076!5.90e-08!43 | |ontology_enrichment_celltype=CL:0000223!5.62e-08!59;CL:0002076!5.90e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002251;2.54e-08;20!CL:0002076;2.06e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.26e-09,42;CL:0000223,2.74e-09,58;CL:0002251,2.47e-08,20;CL:0000047,1.75e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.77e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-38!82;UBERON:0005743!3.71e-37!86;UBERON:0000073!3.60e-36!94;UBERON:0001016!3.60e-36!94;UBERON:0001049!1.07e-34!57;UBERON:0005068!1.07e-34!57;UBERON:0006241!1.07e-34!57;UBERON:0007135!1.07e-34!57;UBERON:0004121!6.86e-34!169;UBERON:0000033!3.56e-33!123;UBERON:0000153!1.11e-32!129;UBERON:0007811!1.11e-32!129;UBERON:0000924!2.33e-32!173;UBERON:0006601!2.33e-32!173;UBERON:0002616!5.91e-32!59;UBERON:0000955!3.09e-30!69;UBERON:0006238!3.09e-30!69;UBERON:0003075!2.22e-29!86;UBERON:0007284!2.22e-29!86;UBERON:0007023!2.85e-27!115;UBERON:0002346!3.97e-27!90;UBERON:0002780!4.04e-26!41;UBERON:0001890!4.04e-26!41;UBERON:0006240!4.04e-26!41;UBERON:0003080!4.99e-26!42;UBERON:0001893!7.01e-24!34;UBERON:0002020!7.44e-24!34;UBERON:0003528!7.44e-24!34;UBERON:0002791!4.33e-23!33;UBERON:0001869!6.19e-23!32;UBERON:0003056!1.21e-20!61;UBERON:0000956!3.51e-18!25;UBERON:0000203!3.51e-18!25;UBERON:0000468!5.61e-18!659;UBERON:0002619!1.20e-17!22;UBERON:0000467!9.67e-17!625;UBERON:0000922!1.45e-16!612;UBERON:0000480!1.54e-16!626;UBERON:0000481!1.68e-16!347;UBERON:0001950!3.21e-16!20;UBERON:0000475!1.00e-15!365;UBERON:0000062!4.41e-15!511;UBERON:0002050!5.94e-14!605;UBERON:0005423!5.94e-14!605;UBERON:0000923!1.18e-13!604;UBERON:0005291!1.18e-13!604;UBERON:0006598!1.18e-13!604;UBERON:0002532!1.18e-13!604;UBERON:0004111!6.45e-13!241;UBERON:0000483!6.59e-13!309;UBERON:0000119!1.03e-12!312;UBERON:0000025!1.86e-12!194;UBERON:0000477!2.95e-12!286;UBERON:0000064!1.94e-10!219;UBERON:0003076!1.10e-09!15;UBERON:0003057!1.10e-09!15;UBERON:0004733!9.04e-08!12;UBERON:0002028!9.04e-08!12;UBERON:0007277!9.04e-08!12;UBERON:0002420!3.20e-07!9;UBERON:0007245!3.20e-07!9;UBERON:0010009!3.20e-07!9;UBERON:0010011!3.20e-07!9;UBERON:0000454!3.20e-07!9;UBERON:0002308!4.10e-07!9;UBERON:0000125!4.10e-07!9;UBERON:0004732!9.29e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.34e-25;32!UBERON:0001893;3.19e-25;34!UBERON:0003528;4.46e-25;34!UBERON:0002020;4.46e-25;34!UBERON:0002791;7.55e-25;32!UBERON:0002619;1.87e-22;22!UBERON:0000956;5.45e-22;25!UBERON:0000203;5.45e-22;25!UBERON:0002780;2.14e-21;41!UBERON:0001890;2.14e-21;41!UBERON:0000073;6.32e-21;53!UBERON:0002616;6.32e-21;53!UBERON:0001950;1.33e-20;20!UBERON:0001017;1.28e-15;75!UBERON:0000955;1.98e-13;68!UBERON:0001016;1.85e-12;83!UBERON:0002420;6.76e-09;9!UBERON:0007245;6.76e-09;9!UBERON:0010009;6.76e-09;9!UBERON:0010011;6.76e-09;9!UBERON:0000454;6.76e-09;9!UBERON:0000125;9.29e-09;9!UBERON:0002308;9.29e-09;9!UBERON:0011216;2.39e-08;132!UBERON:0007023;4.94e-08;114!UBERON:0004733;1.06e-07;12!UBERON:0002028;1.06e-07;12!UBERON:0000200;1.22e-07;6!UBERON:0001871;3.34e-07;6!UBERON:0009663;5.42e-07;7!UBERON:0002298;5.71e-07;6!UBERON:0004732;7.56e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.22e-40,81;UBERON:0001049,2.21e-39,56;UBERON:0005068,2.21e-39,56;UBERON:0006241,2.21e-39,56;UBERON:0007135,2.21e-39,56;UBERON:0001016,3.52e-37,89;UBERON:0000073,9.58e-37,53;UBERON:0002616,9.58e-37,53;UBERON:0004121,2.75e-36,171;UBERON:0000924,2.75e-36,171;UBERON:0006601,2.75e-36,171;UBERON:0010371,4.82e-33,104;UBERON:0003075,1.57e-32,82;UBERON:0007284,1.57e-32,82;UBERON:0011216,2.85e-31,223;UBERON:0000955,2.26e-30,68;UBERON:0006238,2.26e-30,68;UBERON:0002780,2.57e-30,41;UBERON:0001890,2.57e-30,41;UBERON:0003080,2.57e-30,41;UBERON:0006240,2.57e-30,41;UBERON:0002346,7.95e-30,86;UBERON:0001893,2.42e-29,34;UBERON:0003528,2.60e-29,34;UBERON:0002020,2.60e-29,34;UBERON:0007023,3.50e-29,114;UBERON:0001869,4.16e-28,32;UBERON:0002791,1.72e-27,32;UBERON:0010314,4.90e-26,132;UBERON:0003056,6.35e-23,61;UBERON:0002619,2.06e-22,22;UBERON:0000956,5.99e-22,25;UBERON:0000203,5.99e-22,25;UBERON:0001950,1.46e-20,20;UBERON:0004111,4.28e-13,240;UBERON:0000922,7.05e-13,592;UBERON:0002050,1.43e-12,564;UBERON:0000025,9.21e-12,192;UBERON:0000923,2.99e-11,560;UBERON:0010316,2.99e-11,560;UBERON:0005291,2.99e-11,560;UBERON:0006598,2.99e-11,560;UBERON:0010317,2.99e-11,560;UBERON:0002532,2.99e-11,560;UBERON:0005423,7.07e-11,581;UBERON:0003076,4.59e-10,15;UBERON:0003057,4.59e-10,15;UBERON:0002420,6.67e-09,9;UBERON:0007245,6.67e-09,9;UBERON:0010009,6.67e-09,9;UBERON:0010011,6.67e-09,9;UBERON:0000454,6.67e-09,9;UBERON:0000125,9.17e-09,9;UBERON:0002308,9.17e-09,9;UBERON:0000483,1.32e-08,306;UBERON:0000119,3.04e-08,309;UBERON:0004733,1.17e-07,12;UBERON:0002028,1.17e-07,12;UBERON:0007277,1.17e-07,12;UBERON:0000200,1.22e-07,6;UBERON:0001871,3.61e-07,6;UBERON:0009663,5.34e-07,7;UBERON:0002298,5.73e-07,6;UBERON:0004732,8.31e-07,13 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,2.22779435328084,2.31978163009541,3.36162573225888,3.61616716814386,1.46062018077475,0.975865597581014,2.09305798730539,0.816002764977012,0.626909442956176,3.43483184557268,12.1818238314867,0.753255837568817,0,0.328402357799783,0,0,0,2.16742572642506,7.35536979583142,3.31326510656075,2.58827807116751,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,1.79616152611729,2.4390233720882,1.40535657109002,119.583895929412,5.10013403609559,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,5.66922267785295,0.993943903390637,0.25326102332916,0,0.286836620748814,1.41867352879343,7.28880880184999,0,2.22000793575444,8.09148692039392,0.134710672069688,1.30769522490767,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0,5.40470996171779,0,0,0,0,0,1.34668891163253,1.00094815897571,0,0.438977620880838,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,1.20036438433761,0.92747276314595,0.515281080091258,0.558350568994769,0.506328996723799,0.974370051611986,0,0.0920498986422993,2.26304479546337,0,0.906768884048762,0.169560592310488,11.5956511897978,21.0014512854943,12.9062067925052,25.9803994056038,11.5300898439692,18.0100611447753,14.6162087571672,11.1021174385276,6.56959246336494,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,10.1404027857465,1.96565443335525,7.08947888017685,0,15.9884970106048,0.514703430895577,22.279307937951,1.1240175325762,2.81481122752566,42.0351541019724,0,0,0,2.55046890945169,2.34817388471643,0,0,0,0,0,0,0,0,8.43604505880993,7.55919576894868,28.3550194484773,11.6426079513703,27.3195902203124,8.43441894163465,0,0,0.621984346622316,0.432359860250884,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,114.088486275886,31.2335649258292,15.4657762555539,15.5790126760944,21.6899175562076,0,0,0,6.25726607767613,3.00102312635806,3.25518028439683,0,0,0,0,6.3198680942821,4.5481500811197,3.10419213877515,11.2918351751024,3.50301420229236,0.347534457872331,0.391602314925481,0,0,0,0,0,0,0,0,0.306923946576125,0,0,1.53512174720011,0,0,0.771048469013278,0,2.7101961484557,0.519254429183621,0.348631135379878,4.95523743325651,2.80709058424599,0.920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0,1.51141141271498,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0,34.8278619369301,48.9896636778137,69.4729989331351,14.3566384499043,21.4519881192052,0,0,0.308097234229289,0.921022048356777,0.137836572484531,0.859361958946189,0.870100163485371,0.170453254832202,1.51354460599453,17.8507708589856,7.87979276196935,11.7403695495017,5.36136238534415,0,0,0,0,0,0,0.74129687641568,0,0.744316738719335,1.58189712359363,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,1.41527737101321,0,0,0,0.243713489631284,0,0,0,3.39024349860728,0,0,0,0,0.655894752046633,2.43492452355245,0.92947049429925,0.563391205064483,2.00775893085672,0.491245205065606,0.7133421029625,0.709522128141196,0,0,0,0.349934720244983,5.19599408717765,6.70302275535787,1.08890984861323,32.6678988695424,0.86101074534246,3.36942951335251,1.7737206141467,3.44585100310439,0,0,0,0,0,0,0,0,0,0,11.0268097191464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,8.60846485877811,0,0,0,0.284136146806413,0,1.78178808499583,0,1376.89449215632,364.193119086817,4.11842208584752,0,0.422250816255987,1.79323189425963,1.10513566212459,0,21.9877667379633,0.123084805461069,1.24415835064723,0,0,0,0.394573622547734,0,1.11136990144637,446.862395949896,1509.151420897,65.8725533403941,0,0,0.724999575434793,15.248322070257,0,2.6002644994473,5.17115059862197,0.291604613383254,0,53.1444831488303,227.444883247519,993.307103424212,553.55977521571,356.134880839025,969.244684626251,0,26.351087668656,10.3113346395088,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,1.08194319871046,3.98104772431402,0.353830258013357,1.83309043480088,0,0,0,63.4918672677978,0.802577647298789,170.310252042322,0,0.586993856796269,0,0,1.20990716048664,34.2801493026149,25.7169379087946,0,0,0,0,0.313932918407225,0,0,0,0,51.1520314503051,4.52707874218093,0.52418000472609,0,0.0967563312890851,0,0,42.6751672549045,0,26.6657274121028,0,0,1785.80762152747,0.195551382734803,0.561111741760736,0,1.39866726707491,0,0.458146384663663,0.857974989309823,1.4405479798815,0,2.59263438078475,0,0.104602846312333,0,0,56.4395071387202,28.8870349462105,0,0,0,35.7481473628485,13.062144168666,2.87149209830726,2.1964690054889,9.013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| ||
|short_description=p1@VSNL1 | |short_description=p1@VSNL1 | ||
}} | }} |
Latest revision as of 09:45, 18 September 2015
Short description: | p1@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000451533, ENST00000483921_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | E9PE24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.26e-09 | 42 |
endodermal cell | 2.74e-09 | 58 |
epithelial cell of alimentary canal | 2.47e-08 | 20 |
neuronal stem cell | 1.75e-07 | 8 |