FFCP PHASE1:Hg19::chr11:57193544..57193561,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29015 | |EntrezGene=29015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |HGNC=17466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000530232_5end | |association_with_transcript=70bp_to_ENST00000530232_5end | ||
|cluster_id=chr11:57193544..57193561,- | |||
|description=CAGE_peak_21_at_SLC43A3_5end | |description=CAGE_peak_21_at_SLC43A3_5end | ||
|id=chr11:57193544..57193561,- | |id=chr11:57193544..57193561,- | ||
|ontology_enrichment_celltype=CL:0002057!4.35e-19!42;CL:0000860!4.25e-17!45;CL:0000839!1.23e-16!70;CL:0002194!3.28e-16!63;CL:0000576!3.28e-16!63;CL:0000040!3.28e-16!63;CL:0000559!3.28e-16!63;CL:0002009!2.44e-15!65;CL:0000557!4.74e-15!71;CL:0000766!4.49e-14!76;CL:0000763!2.07e-12!112;CL:0000049!2.07e-12!112;CL:0002031!1.74e-10!124;CL:0002087!1.95e-09!119;CL:0002032!2.22e-09!165;CL:0000837!2.22e-09!165;CL:0000037!2.34e-08!172;CL:0000566!2.34e-08!172;CL:0000738!1.33e-07!140;CL:0000988!1.52e-07!182 | |ontology_enrichment_celltype=CL:0002057!4.35e-19!42;CL:0000860!4.25e-17!45;CL:0000839!1.23e-16!70;CL:0002194!3.28e-16!63;CL:0000576!3.28e-16!63;CL:0000040!3.28e-16!63;CL:0000559!3.28e-16!63;CL:0002009!2.44e-15!65;CL:0000557!4.74e-15!71;CL:0000766!4.49e-14!76;CL:0000763!2.07e-12!112;CL:0000049!2.07e-12!112;CL:0002031!1.74e-10!124;CL:0002087!1.95e-09!119;CL:0002032!2.22e-09!165;CL:0000837!2.22e-09!165;CL:0000037!2.34e-08!172;CL:0000566!2.34e-08!172;CL:0000738!1.33e-07!140;CL:0000988!1.52e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.51e-19;39!CL:0000234;1.51e-19;39!CL:0000235;1.44e-17;6!CL:0000860;1.46e-11;33!CL:0002057;1.46e-11;33!CL:0000766;2.69e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.13e-18,48;CL:0000234,1.13e-18,48;CL:0000235,1.71e-17,6;CL:0002194,5.65e-15,59;CL:0000576,5.65e-15,59;CL:0000040,5.65e-15,59;CL:0000559,5.65e-15,59;CL:0002009,1.70e-14,61;CL:0000839,2.00e-13,66;CL:0000557,3.14e-13,67;CL:0000766,2.48e-12,72;CL:0000763,3.91e-11,108;CL:0000049,3.91e-11,108;CL:0000860,6.90e-10,42;CL:0002057,6.90e-10,42;CL:0002087,8.87e-08,115;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0002031,1.86e-07,120;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.54e-12!80;UBERON:0001474!2.46e-10!86;UBERON:0004765!2.95e-10!101;UBERON:0001434!2.95e-10!101;UBERON:0002405!2.87e-09!115;UBERON:0002390!8.52e-09!102;UBERON:0003061!8.52e-09!102;UBERON:0002193!5.69e-08!112 | |ontology_enrichment_uberon=UBERON:0002371!5.54e-12!80;UBERON:0001474!2.46e-10!86;UBERON:0004765!2.95e-10!101;UBERON:0001434!2.95e-10!101;UBERON:0002405!2.87e-09!115;UBERON:0002390!8.52e-09!102;UBERON:0003061!8.52e-09!102;UBERON:0002193!5.69e-08!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-11,76;UBERON:0001474,7.40e-11,82;UBERON:0004765,6.57e-10,90;UBERON:0002405,1.36e-09,93;UBERON:0002390,4.12e-09,98;UBERON:0003061,4.12e-09,98;UBERON:0001434,6.23e-09,100;UBERON:0002193,2.81e-08,108 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.464858073811369,1.6446715520873,0.619412741790207,0.863077176966451,0.256160706529101,0.236482229888585,1.37898272294647,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0.306083892370903,0.962787081228281,0,0.659702600373432,0,0.852449501065388,1.45104619314292,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,0,0.288239906833923,0,0.126995788584338,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,1.11362469558097,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.254019996197353,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0.686520205190771,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0.142953088353313,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,2.86412212251742,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.464858073811369,1.6446715520873,0.619412741790207,0.863077176966451,0.256160706529101,0.236482229888585,1.37898272294647,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0.306083892370903,0.962787081228281,0,0.659702600373432,0,0.852449501065388,1.45104619314292,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,0,0.288239906833923,0,0.126995788584338,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,1.11362469558097,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.254019996197353,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0.686520205190771,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0.142953088353313,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,2.86412212251742,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p21@SLC43A3 | |short_description=p21@SLC43A3 | ||
}} | }} |
Latest revision as of 09:40, 18 September 2015
Short description: | p21@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SLC43A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000530232_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.13e-18 | 48 |
phagocyte | 1.13e-18 | 48 |
macrophage | 1.71e-17 | 6 |
monopoietic cell | 5.65e-15 | 59 |
monocyte | 5.65e-15 | 59 |
monoblast | 5.65e-15 | 59 |
promonocyte | 5.65e-15 | 59 |
macrophage dendritic cell progenitor | 1.70e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.00e-13 | 66 |
granulocyte monocyte progenitor cell | 3.14e-13 | 67 |
myeloid leukocyte | 2.48e-12 | 72 |
myeloid cell | 3.91e-11 | 108 |
common myeloid progenitor | 3.91e-11 | 108 |
classical monocyte | 6.90e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.90e-10 | 42 |
nongranular leukocyte | 8.87e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.86e-07 | 120 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 8.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-11 | 76 |
bone element | 7.40e-11 | 82 |
skeletal element | 6.57e-10 | 90 |
immune system | 1.36e-09 | 93 |
hematopoietic system | 4.12e-09 | 98 |
blood island | 4.12e-09 | 98 |
skeletal system | 6.23e-09 | 100 |
hemolymphoid system | 2.81e-08 | 108 |