FFCP PHASE1:Hg19::chr5:63461191..63461205,+: Difference between revisions
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|id=chr5:63461191..63461205,+
|short_description=p5@RNF180
|description=CAGE_peak_5_at_RNF180_5end
|association_with_transcript=-465bp_to_ENST00000296615,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285671 | |EntrezGene=285671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27752 | |HGNC=27752 | ||
|TSSclassifier=strong | |||
|UniProt=Q86T96 | |UniProt=Q86T96 | ||
|association_with_transcript=-465bp_to_ENST00000296615,ENST00000381081,NM_001113561,NM_178532,uc003jth.3,uc003jti.2,uc010iws.2_5end | |||
|cluster_id=chr5:63461191..63461205,+ | |||
|coexpression_cluster_id=C189 | |||
|description=CAGE_peak_5_at_RNF180_5end | |||
|id=chr5:63461191..63461205,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.74e-14;24!CL:0002253;2.02e-11;2!CL:0000047;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.74e-14,24;CL:0000826,9.74e-14,24;CL:0002253,2.02e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.82e-16!115;UBERON:0006947!1.13e-13!3;UBERON:0004054!1.13e-13!3;UBERON:0002308!4.86e-11!9;UBERON:0000125!4.86e-11!9;UBERON:0005904!2.29e-10!4;UBERON:0000369!7.02e-10!4;UBERON:0002435!7.02e-10!4;UBERON:0000204!7.02e-10!4;UBERON:0010082!7.02e-10!4;UBERON:0009663!1.66e-09!7;UBERON:0005743!4.02e-08!86;UBERON:0001017!1.59e-07!82;UBERON:0002420!2.09e-07!9;UBERON:0007245!2.09e-07!9;UBERON:0010009!2.09e-07!9;UBERON:0010011!2.09e-07!9;UBERON:0000454!2.09e-07!9;UBERON:0000073!4.63e-07!94;UBERON:0001016!4.63e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;6.31e-21;1!UBERON:0001000;6.31e-21;1!UBERON:0005352;6.31e-21;1!UBERON:0000007;3.70e-11;2!UBERON:0006947;7.26e-08;3!UBERON:0004054;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,4.22e-21,1;UBERON:0005352,4.22e-21,1;UBERON:0006834,5.16e-21,1;UBERON:0000007,4.52e-11,2;UBERON:0006947,6.34e-08,3;UBERON:0004054,6.34e-08,3 | |||
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| ||
|short_description=p5@RNF180 | |||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p5@RNF180 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF180_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | -465bp_to_ENST00000296615, ENST00000381081, NM_001113561, NM_178532, uc003jth.3, uc003jti.2, uc010iws.2_5end |
EntrezGene: | RNF180 |
HGNC: | 27752 |
UniProt: | Q86T96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.74e-14 | 24 |
pro-B cell | 9.74e-14 | 24 |
epithelial cell of large intestine | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 4.22e-21 | 1 |
spermatic cord | 4.22e-21 | 1 |
uterus or analog | 5.16e-21 | 1 |
pituitary gland | 4.52e-11 | 2 |
male genital duct | 6.34e-08 | 3 |
internal male genitalia | 6.34e-08 | 3 |