FFCP PHASE1:Hg19::chr12:45270077..45270143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4753 | |EntrezGene=4753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |HGNC=7751 | ||
|TSSclassifier=strong | |||
|UniProt=Q99435,F5H5N4,Q96JS2,F8VVB6 | |UniProt=Q99435,F5H5N4,Q96JS2,F8VVB6 | ||
|association_with_transcript=0bp_to_ENST00000452445,ENST00000543684,ENST00000547751,ENST00000549027,ENST00000551601_5end | |association_with_transcript=0bp_to_ENST00000452445,ENST00000543684,ENST00000547751,ENST00000549027,ENST00000551601_5end | ||
|cluster_id=chr12:45270077..45270143,- | |||
|coexpression_cluster_id=C1015 | |coexpression_cluster_id=C1015 | ||
|description=CAGE_peak_1_at_NELL2_5end | |description=CAGE_peak_1_at_NELL2_5end | ||
|id=chr12:45270077..45270143,- | |id=chr12:45270077..45270143,- | ||
|ontology_enrichment_celltype=CL:0000791;3.67e-13;18!CL:0000789;3.67e-13;18!CL:0002419;3.67e-13;18!CL:0000625;7.84e-11;11!CL:0000084;1.03e-07;25 | |ontology_enrichment_celltype=CL:0000791!1.81e-10!18;CL:0000789!1.81e-10!18;CL:0002420!1.81e-10!18;CL:0002419!1.81e-10!18;CL:0000790!1.81e-10!18;CL:0000625!8.36e-09!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;3.67e-13;18!CL:0000789;3.67e-13;18!CL:0002419;3.67e-13;18!CL:0000625;7.84e-11;11!CL:0000084;1.03e-07;25 | ||
|ontology_enrichment_disease=DOID:171;7.93e-07;10 | |ontology_enrichment_celltype_v019_2=CL:0000791,3.21e-13,18;CL:0000789,3.21e-13,18;CL:0002420,3.21e-13,18;CL:0002419,3.21e-13,18;CL:0000790,3.21e-13,18;CL:0000625,7.92e-11,11;CL:0000084,9.47e-08,25;CL:0000827,9.47e-08,25 | ||
|ontology_enrichment_uberon=UBERON:0002619;9.42e-23;22!UBERON:0001869;1.01e-22;32!UBERON:0001893;2.76e-22;34!UBERON:0002780;3.89e-22;41!UBERON:0001890;3.89e-22;41!UBERON:0003528;4.02e-22;34!UBERON:0002020;4.02e-22;34!UBERON:0002791;4.08e-22;32!UBERON:0001950;5.94e-21;20!UBERON:0000073;6.04e-21;53!UBERON:0002616;6.04e-21;53!UBERON:0000956;2.87e-20;25!UBERON:0000203;2.87e-20;25!UBERON:0001017;8.81e-14;75!UBERON:0000955;1.51e-13;68!UBERON:0001016;3.37e-13;83!UBERON:0007023;2.46e-11;114!UBERON:0000922;3.28e-08;49!UBERON:0001871;6.43e-08;6!UBERON:0002420;1.28e-07;9!UBERON:0007245;1.28e-07;9!UBERON:0010009;1.28e-07;9!UBERON:0010011;1.28e-07;9!UBERON:0000454;1.28e-07;9!UBERON:0000200;4.63e-07;6!UBERON:0004732;5.08e-07;13!UBERON:0000125;5.95e-07;9!UBERON:0002308;5.95e-07;9!UBERON:0004733;7.61e-07;12!UBERON:0002028;7.61e-07;12 | |ontology_enrichment_development_v019=CL:0000790;3.67e-13;18!UBERON:0006601;8.01e-11;82 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;7.93e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.36e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-37!115;UBERON:0000073!2.82e-35!94;UBERON:0001016!2.82e-35!94;UBERON:0005743!8.45e-34!86;UBERON:0001017!7.28e-32!82;UBERON:0001049!4.94e-31!57;UBERON:0005068!4.94e-31!57;UBERON:0006241!4.94e-31!57;UBERON:0007135!4.94e-31!57;UBERON:0002346!3.98e-29!90;UBERON:0003075!5.86e-27!86;UBERON:0007284!5.86e-27!86;UBERON:0002616!1.13e-26!59;UBERON:0002780!6.44e-26!41;UBERON:0001890!6.44e-26!41;UBERON:0006240!6.44e-26!41;UBERON:0003080!7.73e-26!42;UBERON:0000955!1.79e-25!69;UBERON:0006238!1.79e-25!69;UBERON:0003056!8.10e-24!61;UBERON:0001893!3.27e-22!34;UBERON:0002020!5.62e-22!34;UBERON:0003528!5.62e-22!34;UBERON:0001869!1.16e-21!32;UBERON:0002791!1.77e-21!33;UBERON:0000924!1.41e-20!173;UBERON:0006601!1.41e-20!173;UBERON:0004121!7.11e-19!169;UBERON:0000153!3.10e-18!129;UBERON:0007811!3.10e-18!129;UBERON:0002619!4.10e-18!22;UBERON:0000956!9.65e-18!25;UBERON:0000203!9.65e-18!25;UBERON:0000033!4.78e-17!123;UBERON:0001950!1.04e-16!20;UBERON:0001871!3.22e-07!7;UBERON:0000178!5.08e-07!15;UBERON:0000179!5.08e-07!15;UBERON:0000463!5.08e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.42e-23;22!UBERON:0001869;1.01e-22;32!UBERON:0001893;2.76e-22;34!UBERON:0002780;3.89e-22;41!UBERON:0001890;3.89e-22;41!UBERON:0003528;4.02e-22;34!UBERON:0002020;4.02e-22;34!UBERON:0002791;4.08e-22;32!UBERON:0001950;5.94e-21;20!UBERON:0000073;6.04e-21;53!UBERON:0002616;6.04e-21;53!UBERON:0000956;2.87e-20;25!UBERON:0000203;2.87e-20;25!UBERON:0001017;8.81e-14;75!UBERON:0000955;1.51e-13;68!UBERON:0001016;3.37e-13;83!UBERON:0007023;2.46e-11;114!UBERON:0000922;3.28e-08;49!UBERON:0001871;6.43e-08;6!UBERON:0002420;1.28e-07;9!UBERON:0007245;1.28e-07;9!UBERON:0010009;1.28e-07;9!UBERON:0010011;1.28e-07;9!UBERON:0000454;1.28e-07;9!UBERON:0000200;4.63e-07;6!UBERON:0004732;5.08e-07;13!UBERON:0000125;5.95e-07;9!UBERON:0002308;5.95e-07;9!UBERON:0004733;7.61e-07;12!UBERON:0002028;7.61e-07;12 | |||
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| ||
|short_description=p1@NELL2 | |short_description=p1@NELL2 | ||
}} | }} |
Latest revision as of 09:35, 18 September 2015
Short description: | p1@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NELL2_5end |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | 0bp_to_ENST00000452445, ENST00000543684, ENST00000547751, ENST00000549027, ENST00000551601_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | Q99435F5H5N4Q96JS2F8VVB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.21e-13 | 18 |
alpha-beta T cell | 3.21e-13 | 18 |
immature T cell | 3.21e-13 | 18 |
mature T cell | 3.21e-13 | 18 |
immature alpha-beta T cell | 3.21e-13 | 18 |
CD8-positive, alpha-beta T cell | 7.92e-11 | 11 |
T cell | 9.47e-08 | 25 |
pro-T cell | 9.47e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.36e-07 | 10 |