FFCP PHASE1:Hg19::chr9:96717678..96717689,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56033 | |EntrezGene=56033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=955 | |HGNC=955 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBU1 | |UniProt=Q9HBU1 | ||
|association_with_transcript=-24bp_to_ENST00000253968_5end | |association_with_transcript=-24bp_to_ENST00000253968_5end | ||
|cluster_id=chr9:96717678..96717689,- | |||
|description=CAGE_peak_2_at_BARX1_5end | |description=CAGE_peak_2_at_BARX1_5end | ||
|id=chr9:96717678..96717689,- | |id=chr9:96717678..96717689,- | ||
|ontology_enrichment_celltype=CL:0000153!4.93e-16!9;CL:0000447!4.93e-16!9;CL:0000667!9.95e-12!6;CL:0000058!9.95e-12!6;CL:0000138!9.95e-12!6;CL:0002556!2.78e-11!6;CL:0002552!7.34e-10!5;CL:0000327!1.63e-09!14;CL:0002615!4.83e-07!3;CL:0002579!5.62e-07!3 | |ontology_enrichment_celltype=CL:0000153!4.93e-16!9;CL:0000447!4.93e-16!9;CL:0000667!9.95e-12!6;CL:0000058!9.95e-12!6;CL:0000138!9.95e-12!6;CL:0002556!2.78e-11!6;CL:0002552!7.34e-10!5;CL:0000327!1.63e-09!14;CL:0002615!4.83e-07!3;CL:0002579!5.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002556;3.93e-21;6!CL:0000138;2.39e-16;6!CL:0000153;4.49e-15;9!CL:0000447;4.49e-15;9!CL:0002615;1.47e-12;3!CL:0002579;1.78e-12;3!CL:0002552;3.64e-12;5!CL:0000327;9.48e-09;15!CL:0002602;5.02e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,4.63e-21,6;CL:0000058,2.11e-16,6;CL:0000138,2.11e-16,6;CL:0000153,3.66e-15,9;CL:0000447,3.66e-15,9;CL:0002615,1.45e-12,3;CL:0002579,1.96e-12,3;CL:0002552,2.68e-12,5;CL:0000327,8.43e-09,15;CL:0002602,3.63e-08,2;CL:0000057,1.69e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.94e-07!235;DOID:14566!7.49e-07!239 | |ontology_enrichment_disease=DOID:162!2.94e-07!235;DOID:14566!7.49e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.01e-16!28;UBERON:0000930!1.01e-16!28;UBERON:0003688!2.27e-12!6;UBERON:0002358!2.27e-12!6;UBERON:0003684!2.27e-12!6;UBERON:0001178!2.27e-12!6;UBERON:0004457!6.54e-12!12;UBERON:0000042!6.54e-12!12;UBERON:0001758!2.78e-11!6;UBERON:0003672!2.78e-11!6;UBERON:0000075!1.90e-10!13;UBERON:0005944!1.90e-10!13;UBERON:0004288!1.90e-10!13;UBERON:0003089!1.90e-10!13;UBERON:0004458!1.95e-09!49;UBERON:0004905!3.36e-09!5;UBERON:0000982!3.36e-09!5;UBERON:0004770!3.36e-09!5;UBERON:0001444!9.34e-09!48;UBERON:0001828!4.14e-08!8;UBERON:0000078!4.68e-08!18;UBERON:0000166!5.33e-08!21;UBERON:0003129!1.11e-07!11;UBERON:0000473!2.62e-07!8;UBERON:0002323!4.40e-07!46 | |ontology_enrichment_uberon=UBERON:0000165!1.01e-16!28;UBERON:0000930!1.01e-16!28;UBERON:0003688!2.27e-12!6;UBERON:0002358!2.27e-12!6;UBERON:0003684!2.27e-12!6;UBERON:0001178!2.27e-12!6;UBERON:0004457!6.54e-12!12;UBERON:0000042!6.54e-12!12;UBERON:0001758!2.78e-11!6;UBERON:0003672!2.78e-11!6;UBERON:0000075!1.90e-10!13;UBERON:0005944!1.90e-10!13;UBERON:0004288!1.90e-10!13;UBERON:0003089!1.90e-10!13;UBERON:0004458!1.95e-09!49;UBERON:0004905!3.36e-09!5;UBERON:0000982!3.36e-09!5;UBERON:0004770!3.36e-09!5;UBERON:0001444!9.34e-09!48;UBERON:0001828!4.14e-08!8;UBERON:0000078!4.68e-08!18;UBERON:0000166!5.33e-08!21;UBERON:0003129!1.11e-07!11;UBERON:0000473!2.62e-07!8;UBERON:0002323!4.40e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.78e-23;6!UBERON:0002358;2.78e-23;6!UBERON:0003684;2.78e-23;6!UBERON:0001178;2.78e-23;6!UBERON:0001758;3.93e-21;6!UBERON:0003672;3.93e-21;6!UBERON:0004457;2.01e-20;9!UBERON:0000042;2.01e-20;9!UBERON:0000075;2.32e-20;16!UBERON:0000165;8.12e-19;28!UBERON:0003129;5.01e-18;7!UBERON:0011137;3.48e-15;11!UBERON:0010323;3.48e-15;11!UBERON:0003729;1.44e-09;13!UBERON:0001444;2.46e-08;48!UBERON:0006444;5.02e-08;2!UBERON:0001995;5.02e-08;2!UBERON:0004715;5.02e-08;2!UBERON:0001434;7.77e-08;36!UBERON:0001828;1.30e-07;8!UBERON:0000033;2.95e-07;50!UBERON:0004905;3.21e-07;8!UBERON:0000982;3.21e-07;8!UBERON:0004770;3.21e-07;8!UBERON:0007811;5.15e-07;52!UBERON:0011135;8.14e-07;5!UBERON:0002216;8.14e-07;5!UBERON:0011134;8.14e-07;5!UBERON:0002209;8.14e-07;5!UBERON:0002213;8.14e-07;5!UBERON:0007844;8.14e-07;5!UBERON:0011138;8.14e-07;5!UBERON:0001130;8.14e-07;5!UBERON:0001066;8.14e-07;5!UBERON:0001468;8.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.01e-23,6;UBERON:0002358,3.01e-23,6;UBERON:0003684,3.01e-23,6;UBERON:0001178,3.01e-23,6;UBERON:0000165,4.41e-21,29;UBERON:0000930,4.41e-21,29;UBERON:0001758,4.63e-21,6;UBERON:0003672,4.63e-21,6;UBERON:0000075,2.25e-20,16;UBERON:0003129,5.76e-18,7;UBERON:0010323,4.26e-15,11;UBERON:0004457,4.57e-15,12;UBERON:0000042,4.57e-15,12;UBERON:0011137,4.70e-15,14;UBERON:0001444,3.60e-11,49;UBERON:0003729,1.18e-09,13;UBERON:0000033,2.17e-09,56;UBERON:0004458,2.74e-08,49;UBERON:0000153,3.42e-08,62;UBERON:0007811,3.42e-08,62;UBERON:0006444,3.63e-08,2;UBERON:0001995,3.63e-08,2;UBERON:0004715,3.63e-08,2;UBERON:0001828,1.08e-07,8;UBERON:0002323,1.80e-07,46;UBERON:0004905,2.49e-07,8;UBERON:0000982,2.49e-07,8;UBERON:0004770,2.49e-07,8;UBERON:0000166,4.27e-07,22;UBERON:0011135,6.55e-07,5;UBERON:0002216,6.55e-07,5;UBERON:0011134,6.55e-07,5;UBERON:0002209,6.55e-07,5;UBERON:0002213,6.55e-07,5;UBERON:0005856,6.55e-07,5;UBERON:0005866,6.55e-07,5;UBERON:0005863,6.55e-07,5;UBERON:0007844,6.55e-07,5;UBERON:0011138,6.55e-07,5;UBERON:0001130,6.55e-07,5;UBERON:0001066,6.55e-07,5;UBERON:0001468,6.55e-07,5;UBERON:0004923,8.44e-07,66 | |||
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| ||
|short_description=p2@BARX1 | |short_description=p2@BARX1 | ||
}} | }} |
Latest revision as of 09:29, 18 September 2015
Short description: | p2@BARX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BARX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000253968_5end |
EntrezGene: | BARX1 |
HGNC: | 955 |
UniProt: | Q9HBU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 4.63e-21 | 6 |
chondroblast | 2.11e-16 | 6 |
chondrocyte | 2.11e-16 | 6 |
GAG secreting cell | 3.66e-15 | 9 |
carbohydrate secreting cell | 3.66e-15 | 9 |
adipocyte of omentum tissue | 1.45e-12 | 3 |
omentum preadipocyte | 1.96e-12 | 3 |
fibroblast of gingiva | 2.68e-12 | 5 |
extracellular matrix secreting cell | 8.43e-09 | 15 |
annulus pulposus cell | 3.63e-08 | 2 |
fibroblast | 1.69e-07 | 76 |