FFCP PHASE1:Hg19::chr7:35734730..35734777,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:35734730..35734777,- to FFCP PHASE1:Hg19::chr7:35734730..35734777,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64224 | |EntrezGene=64224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21915 | |HGNC=21915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSE4 | |UniProt=Q9BSE4 | ||
|association_with_transcript=0bp_to_ENST00000311350,ENST00000396081,NM_022373,uc003tes.3,uc003tet.2_5end | |||
|cluster_id=chr7:35734730..35734777,- | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_1_at_HERPUD2_5end | |||
|id=chr7:35734730..35734777,- | |||
|ontology_enrichment_celltype=CL:0000738!1.94e-26!140;CL:0002087!2.86e-22!119;CL:0002031!4.31e-22!124;CL:0000037!2.75e-19!172;CL:0000566!2.75e-19!172;CL:0002057!1.25e-18!42;CL:0002032!2.56e-17!165;CL:0000837!2.56e-17!165;CL:0000988!2.79e-16!182;CL:0000766!3.14e-15!76;CL:0000860!4.08e-15!45;CL:0000839!3.86e-12!70;CL:0000557!1.28e-11!71;CL:0000791!1.82e-11!18;CL:0000789!1.82e-11!18;CL:0002420!1.82e-11!18;CL:0002419!1.82e-11!18;CL:0000790!1.82e-11!18;CL:0000838!6.57e-11!52;CL:0000542!7.75e-11!53;CL:0000051!7.75e-11!53;CL:0002194!2.29e-10!63;CL:0000576!2.29e-10!63;CL:0000040!2.29e-10!63;CL:0000559!2.29e-10!63;CL:0002009!7.94e-10!65;CL:0000084!5.91e-08!25;CL:0000827!5.91e-08!25;CL:0000763!7.26e-08!112;CL:0000049!7.26e-08!112;CL:0000625!1.16e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.31e-16;33!CL:0002057;8.31e-16;33!CL:0000791;1.84e-11;18!CL:0000789;1.84e-11;18!CL:0002419;1.84e-11;18!CL:0000473;7.45e-11;39!CL:0000234;7.45e-11;39!CL:0000576;3.01e-10;48!CL:0002087;6.32e-09;104!CL:0000766;8.63e-09;69!CL:0000084;6.18e-08;25!CL:0000625;1.13e-07;11!CL:0000542;6.33e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.42e-29,136;CL:0002087,1.14e-24,115;CL:0002031,2.05e-24,120;CL:0000037,5.01e-21,168;CL:0002032,5.55e-19,161;CL:0000837,5.55e-19,161;CL:0000860,1.25e-18,42;CL:0002057,1.25e-18,42;CL:0000988,4.79e-18,177;CL:0000766,9.86e-18,72;CL:0000473,1.22e-15,48;CL:0000234,1.22e-15,48;CL:0000839,2.11e-14,66;CL:0000557,8.54e-14,67;CL:0002194,1.53e-12,59;CL:0000576,1.53e-12,59;CL:0000040,1.53e-12,59;CL:0000559,1.53e-12,59;CL:0002009,7.02e-12,61;CL:0000791,1.82e-11,18;CL:0000789,1.82e-11,18;CL:0002420,1.82e-11,18;CL:0002419,1.82e-11,18;CL:0000790,1.82e-11,18;CL:0000838,6.57e-11,52;CL:0000542,7.75e-11,53;CL:0000051,7.75e-11,53;CL:0000763,4.10e-09,108;CL:0000049,4.10e-09,108;CL:0000084,5.91e-08,25;CL:0000827,5.91e-08,25;CL:0000625,1.16e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-14;42!CL:0000790;1.84e-11;18!CL:0000051;6.33e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.37e-29!115;UBERON:0001049!3.04e-14!57;UBERON:0005068!3.04e-14!57;UBERON:0006241!3.04e-14!57;UBERON:0007135!3.04e-14!57;UBERON:0002390!8.19e-14!102;UBERON:0003061!8.19e-14!102;UBERON:0002193!4.01e-13!112;UBERON:0003080!9.41e-13!42;UBERON:0002780!2.19e-12!41;UBERON:0001890!2.19e-12!41;UBERON:0006240!2.19e-12!41;UBERON:0002616!1.04e-11!59;UBERON:0000955!1.28e-11!69;UBERON:0006238!1.28e-11!69;UBERON:0000073!2.16e-11!94;UBERON:0001016!2.16e-11!94;UBERON:0001017!2.32e-11!82;UBERON:0005743!2.66e-11!86;UBERON:0001893!1.80e-10!34;UBERON:0002020!1.83e-10!34;UBERON:0003528!1.83e-10!34;UBERON:0002791!2.79e-10!33;UBERON:0001869!7.77e-10!32;UBERON:0002346!6.42e-09!90;UBERON:0002371!1.01e-08!80;UBERON:0002619!1.72e-08!22;UBERON:0003075!2.25e-08!86;UBERON:0007284!2.25e-08!86;UBERON:0000956!6.37e-08!25;UBERON:0000203!6.37e-08!25;UBERON:0001950!8.82e-08!20;UBERON:0001474!1.01e-07!86;UBERON:0002405!8.41e-07!115;UBERON:0003056!8.83e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.62e-09;41!UBERON:0001890;2.62e-09;41!UBERON:0002791;3.95e-09;32!UBERON:0001893;5.04e-09;34!UBERON:0003528;5.80e-09;34!UBERON:0002020;5.80e-09;34!UBERON:0001869;5.86e-09;32!UBERON:0002619;1.67e-08;22!UBERON:0000073;3.73e-08;53!UBERON:0002616;3.73e-08;53!UBERON:0007023;3.84e-08;114!UBERON:0000956;6.21e-08;25!UBERON:0000203;6.21e-08;25!UBERON:0001950;8.40e-08;20 | |||
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| ||
|short_description=p1@HERPUD2 | |||
}} | }} |
Latest revision as of 09:21, 18 September 2015
Short description: | p1@HERPUD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HERPUD2_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | 0bp_to_ENST00000311350, ENST00000396081, NM_022373, uc003tes.3, uc003tet.2_5end |
EntrezGene: | HERPUD2 |
HGNC: | 21915 |
UniProt: | Q9BSE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.60e-28 | 114 |
hematopoietic system | 9.66e-16 | 98 |
blood island | 9.66e-16 | 98 |
hemolymphoid system | 7.02e-15 | 108 |
neural tube | 7.00e-14 | 56 |
neural rod | 7.00e-14 | 56 |
future spinal cord | 7.00e-14 | 56 |
neural keel | 7.00e-14 | 56 |
regional part of nervous system | 3.41e-13 | 53 |
regional part of brain | 3.41e-13 | 53 |
regional part of forebrain | 2.19e-12 | 41 |
forebrain | 2.19e-12 | 41 |
anterior neural tube | 2.19e-12 | 41 |
future forebrain | 2.19e-12 | 41 |
immune system | 1.98e-11 | 93 |
brain | 2.74e-11 | 68 |
future brain | 2.74e-11 | 68 |
nervous system | 4.08e-11 | 89 |
central nervous system | 4.80e-11 | 81 |
telencephalon | 1.80e-10 | 34 |
brain grey matter | 1.83e-10 | 34 |
gray matter | 1.83e-10 | 34 |
bone marrow | 2.27e-10 | 76 |
regional part of telencephalon | 5.53e-10 | 32 |
cerebral hemisphere | 7.77e-10 | 32 |
bone element | 3.59e-09 | 82 |
neurectoderm | 5.98e-09 | 86 |
regional part of cerebral cortex | 1.72e-08 | 22 |
neural plate | 2.11e-08 | 82 |
presumptive neural plate | 2.11e-08 | 82 |
cerebral cortex | 6.37e-08 | 25 |
pallium | 6.37e-08 | 25 |
neocortex | 8.82e-08 | 20 |
skeletal element | 3.87e-07 | 90 |
skeletal system | 7.53e-07 | 100 |