FFCP PHASE1:Hg19::chr6:34393834..34393854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6204 | |EntrezGene=6204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10383 | |HGNC=10383 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000480942_5end | |association_with_transcript=-7bp_to_ENST00000480942_5end | ||
|cluster_id=chr6:34393834..34393854,- | |||
|coexpression_cluster_id=C3829 | |||
|description=CAGE_peak_1_at_RPS10_5end | |description=CAGE_peak_1_at_RPS10_5end | ||
|id=chr6:34393834..34393854,- | |id=chr6:34393834..34393854,- | ||
|ontology_enrichment_celltype=CL:0000003!1.58e-25!722;CL:0000012!3.67e-23!682;CL:0000548!1.54e-21!679;CL:0000004!1.54e-21!679;CL:0000255!1.54e-21!679;CL:0000144!1.40e-17!625;CL:0002371!1.66e-14!591;CL:0000542!4.00e-12!53;CL:0000051!4.00e-12!53;CL:0000838!8.92e-12!52;CL:0000791!1.07e-08!18;CL:0000789!1.07e-08!18;CL:0002420!1.07e-08!18;CL:0002419!1.07e-08!18;CL:0000790!1.07e-08!18;CL:0000183!1.84e-08!59;CL:0000084!4.59e-08!25;CL:0000827!4.59e-08!25;CL:0000192!1.15e-07!42;CL:0000514!1.15e-07!42;CL:0000063!1.66e-07!578;CL:0000236!4.45e-07!14;CL:0000187!7.12e-07!54 | |ontology_enrichment_celltype=CL:0000003!1.58e-25!722;CL:0000012!3.67e-23!682;CL:0000548!1.54e-21!679;CL:0000004!1.54e-21!679;CL:0000255!1.54e-21!679;CL:0000144!1.40e-17!625;CL:0002371!1.66e-14!591;CL:0000542!4.00e-12!53;CL:0000051!4.00e-12!53;CL:0000838!8.92e-12!52;CL:0000791!1.07e-08!18;CL:0000789!1.07e-08!18;CL:0002420!1.07e-08!18;CL:0002419!1.07e-08!18;CL:0000790!1.07e-08!18;CL:0000183!1.84e-08!59;CL:0000084!4.59e-08!25;CL:0000827!4.59e-08!25;CL:0000192!1.15e-07!42;CL:0000514!1.15e-07!42;CL:0000063!1.66e-07!578;CL:0000236!4.45e-07!14;CL:0000187!7.12e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.07e-08;18!CL:0000789;1.07e-08;18!CL:0002419;1.07e-08;18!CL:0000542;3.35e-08;53!CL:0000084;4.58e-08;25!CL:0000236;7.17e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.00e-12,53;CL:0000051,4.00e-12,53;CL:0000838,8.92e-12,52;CL:0000791,1.07e-08,18;CL:0000789,1.07e-08,18;CL:0002420,1.07e-08,18;CL:0002419,1.07e-08,18;CL:0000790,1.07e-08,18;CL:0000084,4.59e-08,25;CL:0000827,4.59e-08,25;CL:0000192,2.37e-07,43;CL:0000514,2.37e-07,43;CL:0000236,4.45e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-08;18!CL:0000051;3.35e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPS10 | |short_description=p1@RPS10 | ||
}} | }} |
Latest revision as of 09:20, 18 September 2015
Short description: | p1@RPS10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS10_5end |
Coexpression cluster: | C3829_Alveolar_Osteoblast_Mesenchymal_CD19_CD8_Bronchial_CD4 |
Association with transcript: | -7bp_to_ENST00000480942_5end |
EntrezGene: | RPS10 |
HGNC: | 10383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.00e-12 | 53 |
common lymphoid progenitor | 4.00e-12 | 53 |
lymphoid lineage restricted progenitor cell | 8.92e-12 | 52 |
mature alpha-beta T cell | 1.07e-08 | 18 |
alpha-beta T cell | 1.07e-08 | 18 |
immature T cell | 1.07e-08 | 18 |
mature T cell | 1.07e-08 | 18 |
immature alpha-beta T cell | 1.07e-08 | 18 |
T cell | 4.59e-08 | 25 |
pro-T cell | 4.59e-08 | 25 |
smooth muscle cell | 2.37e-07 | 43 |
smooth muscle myoblast | 2.37e-07 | 43 |
B cell | 4.45e-07 | 14 |