FFCP PHASE1:Hg19::chr15:59910206..59910219,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENST00000559200_5end | |association_with_transcript=68bp_to_ENST00000559200_5end | ||
|cluster_id=chr15:59910206..59910219,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_17_at_GCNT3_5end | |description=CAGE_peak_17_at_GCNT3_5end | ||
|id=chr15:59910206..59910219,+ | |id=chr15:59910206..59910219,+ | ||
|ontology_enrichment_celltype=CL:0000239!8.83e-12!3;CL:1000615!8.83e-12!3;CL:0002306!8.83e-12!3;CL:0000167!8.68e-10!1;CL:0000164!8.68e-10!1;CL:0000502!8.68e-10!1;CL:0000172!8.68e-10!1;CL:0000173!8.68e-10!1;CL:0002351!8.68e-10!1 | |ontology_enrichment_celltype=CL:0000239!8.83e-12!3;CL:1000615!8.83e-12!3;CL:0002306!8.83e-12!3;CL:0000167!8.68e-10!1;CL:0000164!8.68e-10!1;CL:0000502!8.68e-10!1;CL:0000172!8.68e-10!1;CL:0000173!8.68e-10!1;CL:0002351!8.68e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.58e-34;1!CL:0000164;2.58e-34;1!CL:0000502;2.58e-34;1!CL:0000172;2.58e-34;1!CL:0000173;2.58e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.58e-34,1;CL:0000164,2.58e-34,1;CL:0000502,2.58e-34,1;CL:0000172,2.58e-34,1;CL:0000173,2.58e-34,1;CL:0002351,2.58e-34,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.58e-34;1 | |||
|ontology_enrichment_disease=DOID:4430!8.68e-10!1 | |ontology_enrichment_disease=DOID:4430!8.68e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;2.58e-34;1!DOID:169;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.58e-34,1;DOID:169,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.37e-17!2;UBERON:0006562!6.06e-12!11;UBERON:0006853!8.83e-12!3;UBERON:0007685!8.83e-12!3;UBERON:0004134!8.83e-12!3;UBERON:0001723!9.83e-12!3;UBERON:0001033!9.83e-12!3;UBERON:0010056!9.83e-12!3;UBERON:0002372!1.32e-09!1;UBERON:0001961!1.32e-09!1;UBERON:0001744!1.32e-09!1;UBERON:0001735!1.32e-09!1;UBERON:0000065!1.17e-08!53;UBERON:0001042!7.25e-08!10;UBERON:0009145!7.25e-08!10;UBERON:0001004!9.66e-08!72;UBERON:0000078!1.90e-07!18 | |ontology_enrichment_uberon=UBERON:0003127!1.37e-17!2;UBERON:0006562!6.06e-12!11;UBERON:0006853!8.83e-12!3;UBERON:0007685!8.83e-12!3;UBERON:0004134!8.83e-12!3;UBERON:0001723!9.83e-12!3;UBERON:0001033!9.83e-12!3;UBERON:0010056!9.83e-12!3;UBERON:0002372!1.32e-09!1;UBERON:0001961!1.32e-09!1;UBERON:0001744!1.32e-09!1;UBERON:0001735!1.32e-09!1;UBERON:0000065!1.17e-08!53;UBERON:0001042!7.25e-08!10;UBERON:0009145!7.25e-08!10;UBERON:0001004!9.66e-08!72;UBERON:0000078!1.90e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;9.86e-18;2!UBERON:0000341;9.86e-18;2!UBERON:0001044;8.72e-07;6!UBERON:0000974;8.72e-07;6!UBERON:0003293;8.72e-07;6!UBERON:0003294;8.72e-07;6!UBERON:0010047;8.72e-07;6!UBERON:0003408;8.72e-07;6!UBERON:0000167;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.67e-18,2;UBERON:0000341,1.27e-17,2;UBERON:0001044,8.97e-07,6;UBERON:0003293,8.97e-07,6;UBERON:0003294,8.97e-07,6;UBERON:0010047,8.97e-07,6;UBERON:0000167,8.97e-07,6 | |||
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|short_description=p17@GCNT3 | |short_description=p17@GCNT3 | ||
}} | }} |
Latest revision as of 09:19, 18 September 2015
Short description: | p17@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 68bp_to_ENST00000559200_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.58e-34 | 1 |
enteroendocrine cell | 2.58e-34 | 1 |
type D enteroendocrine cell | 2.58e-34 | 1 |
somatostatin secreting cell | 2.58e-34 | 1 |
pancreatic D cell | 2.58e-34 | 1 |
progenitor cell of endocrine pancreas | 2.58e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.67e-18 | 2 |
throat | 1.27e-17 | 2 |
saliva-secreting gland | 8.97e-07 | 6 |
gland of oral region | 8.97e-07 | 6 |
gland of foregut | 8.97e-07 | 6 |
oral gland | 8.97e-07 | 6 |
oral cavity | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.58e-34 | 1 |
neuroendocrine tumor | 7.58e-07 | 6 |