FFCP PHASE1:Hg19::chr2:73466862..73466877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10574 | |EntrezGene=10574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1622 | |HGNC=1622 | ||
|TSSclassifier=strong | |||
|UniProt=Q99832 | |UniProt=Q99832 | ||
|association_with_transcript=61bp_to_U83843_5end | |association_with_transcript=61bp_to_U83843_5end | ||
|cluster_id=chr2:73466862..73466877,+ | |||
|description=CAGE_peak_3_at_CCT7_5end | |description=CAGE_peak_3_at_CCT7_5end | ||
|id=chr2:73466862..73466877,+ | |id=chr2:73466862..73466877,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.64e-11!180;CL:0002321!1.76e-08!248;CL:0000220!2.15e-08!246;CL:0000222!7.39e-08!119 | |ontology_enrichment_celltype=CL:0000055!1.64e-11!180;CL:0002321!1.76e-08!248;CL:0000220!2.15e-08!246;CL:0000222!7.39e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.13e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.05e-11,32;CL:0000393,1.47e-09,61;CL:0000211,1.47e-09,61;CL:0000222,7.28e-09,121;CL:0002321,2.04e-08,250;CL:0000680,4.34e-08,58;CL:0000056,4.34e-08,58;CL:0000355,4.34e-08,58;CL:0000192,5.03e-08,43;CL:0000514,5.03e-08,43;CL:0000187,6.67e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.57e-11!42;UBERON:0003509!2.57e-11!42;UBERON:0004572!2.57e-11!42;UBERON:0004872!2.18e-08!84;UBERON:0001981!2.54e-08!60;UBERON:0007500!2.54e-08!60;UBERON:0004537!2.54e-08!60;UBERON:0006965!2.54e-08!60;UBERON:0000055!3.43e-08!69;UBERON:0004573!8.35e-08!33;UBERON:0004571!8.35e-08!33;UBERON:0004290!1.91e-07!70;UBERON:0002049!2.04e-07!79;UBERON:0007798!2.04e-07!79;UBERON:0000914!4.04e-07!83;UBERON:0002329!4.04e-07!83;UBERON:0003077!4.04e-07!83;UBERON:0003059!4.04e-07!83;UBERON:0007282!4.04e-07!83;UBERON:0009618!4.04e-07!83;UBERON:0007285!4.04e-07!83;UBERON:0000486!7.19e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.16e-08;42!UBERON:0003509;2.16e-08;42!UBERON:0004572;2.16e-08;42!UBERON:0001737;2.53e-08;9!UBERON:0001557;2.53e-08;9!UBERON:0007500;8.97e-08;56!UBERON:0001981;8.97e-08;56!UBERON:0004537;8.97e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.68e-12,78;UBERON:0001637,7.68e-12,42;UBERON:0003509,7.68e-12,42;UBERON:0004572,7.68e-12,42;UBERON:0002329,4.71e-11,71;UBERON:0003059,4.71e-11,71;UBERON:0007282,4.71e-11,71;UBERON:0004290,4.71e-11,71;UBERON:0009618,4.71e-11,71;UBERON:0007500,4.92e-11,59;UBERON:0001981,4.92e-11,59;UBERON:0004537,4.92e-11,59;UBERON:0006965,4.92e-11,59;UBERON:0003077,8.50e-11,72;UBERON:0007285,8.50e-11,72;UBERON:0007524,1.51e-10,73;UBERON:0000055,1.09e-09,68;UBERON:0002049,2.55e-09,78;UBERON:0007798,2.55e-09,78;UBERON:0004872,3.81e-09,83;UBERON:0000486,2.01e-08,83;UBERON:0001737,2.69e-08,9;UBERON:0000490,2.90e-08,148;UBERON:0001134,4.65e-08,62;UBERON:0002036,4.65e-08,62;UBERON:0003082,4.65e-08,62;UBERON:0002385,1.24e-07,64;UBERON:0001015,1.24e-07,64;UBERON:0000383,1.24e-07,64;UBERON:0005256,5.12e-07,122 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,3.48935409640147,0,1.26343974685366,0.783556884599516,0.245733936501509,1.39560233594486,0,0.791300934685361,0.37129905888014,0.994192127183747,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0.61560529038394,1.22400414746552,0.940364164434263,0.286235987131057,2.46373965131192,0.87879847716362,0.687720651731561,0.246301768349837,0.550975469195755,0,0.383829398097213,0,0.919421224478927,2.71085326900425,2.21852406100073,0.0774672005803016,0.426507697462265,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0.205601498999509,0.668745981562712,0,0.473447805734733,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0.512365278902701,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.906474741580529,0,0.34362744548263,0.506039384039006,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0,0,0.236777252044017,0,0,0,0.144824403882799,0,1.34140171940727,0.639312809217652,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0.973269740605272,0.0945348171640679,1.77383517970051,0.43917392846563,0.196468613246569,0.364295288292542,1.11235332835329,0.324547393654683,0.174129737299267,0.26591592103773,0,0.571994910780128,0.371457501329565,0.39752481473341,0.860234595106124,0.694281003215189,1.13061588384802,1.25849830862972,1.37559020970034,1.25396979922086,0.516833518338658,0,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,0.367663080345869,0.81014194788176,0.535798369704479,0,0.563057402416611,0,1.89853131913626,1.46561395144326,0,0,0,0,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.67355336034844,0.653847612453835,0.151357427644931,1.15235184896,0.468642863667593,0.624320153660641,2.2818872861778,0.448346041655403,1.64408298101271,1.45685649931318,1.54495887372473,0.61246251376468,1.10550885580591,0.516628905878827,0,0.494533858557114,0,1.43723628363248,0.168336113954066,1.00094815897571,0,0.438977620880838,1.5324389789951,0.150238058906597,0.453728732640084,0.538168907066586,0.213557388818567,0,0.300091096084402,0.515262646192195,0.515281080091258,0.18611685633159,0,0.487185025805993,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.403008392910561,0.508681776931463,0.57978255948989,0.272746120590835,0,0.609868530647977,0.265059536642971,1.39432731443422,0.414644220061482,1.26160425437814,1.82488679537915,1.56449532329816,0,0,0,0.721879481669586,1.0647612003586,1.34867752062481,1.44606617930089,0.661763836394364,1.30727666455444,1.66089433377768,1.21348177344148,0.196221465125346,1.15424147083917,0,1.40241773803446,0,0,0,0,0,1.7658523976586,0,0.857839051492628,0.439001141634502,1.1240175325762,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0.433099343283221,0.925971025153221,0.570762456703795,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.503946384596579,1.13420077793909,0.268675568108545,0.290633938513962,0.766765358330422,0,0.264145302039678,0.207328115540772,0.288239906833923,0.25248486685276,0.126995788584338,0.763976851116555,1.17217447210047,0,0.411309970813294,0.600686115687835,1.14330573052231,0.560655421726804,0,0.36669142910475,0,0,0.845302752556,0.26593811658487,0,1.28603687131071,1.41849132023278,0.799266537048298,0.142977993658148,0,1.64648067356154,1.30294473717494,0.710783897485092,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,0,1.15825045334063,0.61642896765115,0.179060963239896,0.224170287987055,0.197030760201927,0.215627574859517,0,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0,1.62759014219841,0.415941723061614,0.535286966391485,0.473107245101804,0.117141414992713,0.300946099727719,6.82222512167955,1.03473071292505,0,0.737476674166813,0.521301686808497,0.391602314925481,0,0.206768026122887,0.215714200818617,0.213455115606889,1.5156378572313,0,0.604780586659361,0,0,0.280660094433074,0.256278298511402,1.02341449813341,0.64341568457443,1.48418066444991,0.616838775210622,1.06537035187876,0.328508624055237,1.03850885836724,1.51073491997947,0.966875596732978,0.802025881213139,0,0.459257792658427,2.1850940160806,0.262248829918848,0,0.539107359730903,0,0,0.105551628892876,2.27466768141793,1.53084334748864,0.215915916102139,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.895499018888713,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0.103041011647722,0.915694648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| ||
|short_description=p3@CCT7 | |short_description=p3@CCT7 | ||
}} | }} |
Latest revision as of 09:18, 18 September 2015
Short description: | p3@CCT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCT7_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_U83843_5end |
EntrezGene: | CCT7 |
HGNC: | 1622 |
UniProt: | Q99832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.05e-11 | 32 |
electrically responsive cell | 1.47e-09 | 61 |
electrically active cell | 1.47e-09 | 61 |
mesodermal cell | 7.28e-09 | 121 |
embryonic cell | 2.04e-08 | 250 |
muscle precursor cell | 4.34e-08 | 58 |
myoblast | 4.34e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.34e-08 | 58 |
smooth muscle cell | 5.03e-08 | 43 |
smooth muscle myoblast | 5.03e-08 | 43 |
muscle cell | 6.67e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.68e-12 | 78 |
artery | 7.68e-12 | 42 |
arterial blood vessel | 7.68e-12 | 42 |
arterial system | 7.68e-12 | 42 |
somite | 4.71e-11 | 71 |
presomitic mesoderm | 4.71e-11 | 71 |
presumptive segmental plate | 4.71e-11 | 71 |
dermomyotome | 4.71e-11 | 71 |
trunk paraxial mesoderm | 4.71e-11 | 71 |
epithelial tube open at both ends | 4.92e-11 | 59 |
blood vessel | 4.92e-11 | 59 |
blood vasculature | 4.92e-11 | 59 |
vascular cord | 4.92e-11 | 59 |
paraxial mesoderm | 8.50e-11 | 72 |
presumptive paraxial mesoderm | 8.50e-11 | 72 |
dense mesenchyme tissue | 1.51e-10 | 73 |
vessel | 1.09e-09 | 68 |
vasculature | 2.55e-09 | 78 |
vascular system | 2.55e-09 | 78 |
splanchnic layer of lateral plate mesoderm | 3.81e-09 | 83 |
multilaminar epithelium | 2.01e-08 | 83 |
larynx | 2.69e-08 | 9 |
unilaminar epithelium | 2.90e-08 | 148 |
skeletal muscle tissue | 4.65e-08 | 62 |
striated muscle tissue | 4.65e-08 | 62 |
myotome | 4.65e-08 | 62 |
muscle tissue | 1.24e-07 | 64 |
musculature | 1.24e-07 | 64 |
musculature of body | 1.24e-07 | 64 |
trunk mesenchyme | 5.12e-07 | 122 |