FFCP PHASE1:Hg19::chr8:48173514..48173554,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28971 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGV8,B4E0Y6,E7EVI9,E5RHG3,E5RIU7,B4DMX9,E5RG05,B4DFV2 | |||
|association_with_transcript=0bp_to_ENST00000517824,ENST00000518074,ENST00000519661,ENST00000521550,ENST00000522117,ENST00000522222,ENST00000522900,ENST00000524033,ENST00000524126,ENST00000524141,ENST00000541342,uc003xqd.2,uc003xqe.2,uc010lxs.2,uc011lcz.1,uc011lda.1,uc011ldb.1,uc011ldc.1,uc011ldd.1_5end | |||
|cluster_id=chr8:48173514..48173554,+ | |||
|description=CAGE_peak_1_at_KIAA0146_5end | |||
|id=chr8:48173514..48173554,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0002032!9.91e-07!165;CL:0000837!9.91e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.34e-08,168;CL:0002032,2.49e-07,161;CL:0000837,2.49e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.08e-08;82 | |||
|ontology_enrichment_disease=DOID:8692!3.98e-08!31;DOID:1240!4.93e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.98e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.98e-08,31;DOID:1240,4.93e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-21!115;UBERON:0000955!6.45e-19!69;UBERON:0006238!6.45e-19!69;UBERON:0001049!7.90e-19!57;UBERON:0005068!7.90e-19!57;UBERON:0006241!7.90e-19!57;UBERON:0007135!7.90e-19!57;UBERON:0001017!2.68e-18!82;UBERON:0002616!3.49e-18!59;UBERON:0005743!3.01e-17!86;UBERON:0000073!5.76e-17!94;UBERON:0001016!5.76e-17!94;UBERON:0003080!9.46e-16!42;UBERON:0002780!1.70e-15!41;UBERON:0001890!1.70e-15!41;UBERON:0006240!1.70e-15!41;UBERON:0002020!1.07e-13!34;UBERON:0003528!1.07e-13!34;UBERON:0001869!1.26e-13!32;UBERON:0001893!1.31e-13!34;UBERON:0002791!3.87e-13!33;UBERON:0002346!5.19e-12!90;UBERON:0002619!1.05e-11!22;UBERON:0003075!1.46e-11!86;UBERON:0007284!1.46e-11!86;UBERON:0000956!3.43e-11!25;UBERON:0000203!3.43e-11!25;UBERON:0001950!9.89e-11!20;UBERON:0000153!1.39e-10!129;UBERON:0007811!1.39e-10!129;UBERON:0000033!1.64e-09!123;UBERON:0000924!1.11e-08!173;UBERON:0006601!1.11e-08!173;UBERON:0003056!2.66e-08!61;UBERON:0004121!2.87e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.52e-12;32!UBERON:0003528;5.10e-12;34!UBERON:0002020;5.10e-12;34!UBERON:0001893;6.94e-12;34!UBERON:0002791;9.56e-12;32!UBERON:0002619;1.01e-11;22!UBERON:0002780;1.94e-11;41!UBERON:0001890;1.94e-11;41!UBERON:0000956;3.37e-11;25!UBERON:0000203;3.37e-11;25!UBERON:0001950;9.76e-11;20!UBERON:0000073;1.22e-10;53!UBERON:0002616;1.22e-10;53!UBERON:0000955;8.04e-09;68!UBERON:0001017;1.06e-08;75!UBERON:0001016;6.65e-08;83!UBERON:0007023;4.95e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-20,114;UBERON:0000955,1.20e-18,68;UBERON:0006238,1.20e-18,68;UBERON:0001049,1.45e-18,56;UBERON:0005068,1.45e-18,56;UBERON:0006241,1.45e-18,56;UBERON:0007135,1.45e-18,56;UBERON:0001017,4.99e-18,81;UBERON:0001016,1.21e-17,89;UBERON:0000073,1.56e-17,53;UBERON:0002616,1.56e-17,53;UBERON:0002780,1.70e-15,41;UBERON:0001890,1.70e-15,41;UBERON:0003080,1.70e-15,41;UBERON:0006240,1.70e-15,41;UBERON:0003528,1.07e-13,34;UBERON:0002020,1.07e-13,34;UBERON:0001869,1.26e-13,32;UBERON:0001893,1.31e-13,34;UBERON:0002791,5.48e-13,32;UBERON:0002619,1.05e-11,22;UBERON:0002346,2.62e-11,86;UBERON:0000956,3.43e-11,25;UBERON:0000203,3.43e-11,25;UBERON:0003075,7.29e-11,82;UBERON:0007284,7.29e-11,82;UBERON:0001950,9.89e-11,20;UBERON:0011216,1.32e-08,223;UBERON:0003056,2.40e-08,61;UBERON:0004121,5.70e-08,171;UBERON:0000924,5.70e-08,171;UBERON:0006601,5.70e-08,171 | |||
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| |||
|short_description=p1@KIAA0146 | |||
}} |
Latest revision as of 09:17, 18 September 2015
Short description: | p1@KIAA0146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0146_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517824, ENST00000518074, ENST00000519661, ENST00000521550, ENST00000522117, ENST00000522222, ENST00000522900, ENST00000524033, ENST00000524126, ENST00000524141, ENST00000541342, uc003xqd.2, uc003xqe.2, uc010lxs.2, uc011lcz.1, uc011lda.1, uc011ldb.1, uc011ldc.1, uc011ldd.1_5end |
EntrezGene: | KIAA0146 |
HGNC: | 28971 |
UniProt: | E5RGV8B4E0Y6E7EVI9E5RHG3E5RIU7B4DMX9E5RG05B4DFV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.34e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.49e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-20 | 114 |
brain | 1.20e-18 | 68 |
future brain | 1.20e-18 | 68 |
neural tube | 1.45e-18 | 56 |
neural rod | 1.45e-18 | 56 |
future spinal cord | 1.45e-18 | 56 |
neural keel | 1.45e-18 | 56 |
central nervous system | 4.99e-18 | 81 |
nervous system | 1.21e-17 | 89 |
regional part of nervous system | 1.56e-17 | 53 |
regional part of brain | 1.56e-17 | 53 |
regional part of forebrain | 1.70e-15 | 41 |
forebrain | 1.70e-15 | 41 |
anterior neural tube | 1.70e-15 | 41 |
future forebrain | 1.70e-15 | 41 |
brain grey matter | 1.07e-13 | 34 |
gray matter | 1.07e-13 | 34 |
cerebral hemisphere | 1.26e-13 | 32 |
telencephalon | 1.31e-13 | 34 |
regional part of telencephalon | 5.48e-13 | 32 |
regional part of cerebral cortex | 1.05e-11 | 22 |
neurectoderm | 2.62e-11 | 86 |
cerebral cortex | 3.43e-11 | 25 |
pallium | 3.43e-11 | 25 |
neural plate | 7.29e-11 | 82 |
presumptive neural plate | 7.29e-11 | 82 |
neocortex | 9.89e-11 | 20 |
organ system subdivision | 1.32e-08 | 223 |
pre-chordal neural plate | 2.40e-08 | 61 |
ectoderm-derived structure | 5.70e-08 | 171 |
ectoderm | 5.70e-08 | 171 |
presumptive ectoderm | 5.70e-08 | 171 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.98e-08 | 31 |
leukemia | 4.93e-08 | 39 |