FFCP PHASE1:Hg19::chr17:79827439..79827480,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:79827439..79827480,- to FFCP PHASE1:Hg19::chr17:79827439..79827480,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_uc002kjk.1_5end | |||
|cluster_id=chr17:79827439..79827480,- | |||
|description=CAGE_peak_7_at_ARHGDIA_5end | |||
|id=chr17:79827439..79827480,- | |||
|ontology_enrichment_celltype=CL:0002371!7.99e-21!591;CL:0000144!1.54e-20!625;CL:0000222!2.08e-18!119;CL:0000548!2.28e-17!679;CL:0000004!2.28e-17!679;CL:0000255!2.28e-17!679;CL:0000012!2.00e-16!682;CL:0000220!1.23e-13!246;CL:0002321!5.11e-13!248;CL:0000003!1.83e-12!722;CL:0000183!9.25e-12!59;CL:0000055!1.95e-11!180;CL:0000723!1.99e-10!436;CL:0000680!2.68e-10!57;CL:0000056!2.68e-10!57;CL:0000355!2.68e-10!57;CL:0000192!6.55e-10!42;CL:0000514!6.55e-10!42;CL:0000187!7.61e-10!54;CL:0000048!8.07e-10!430;CL:0000213!2.85e-09!57;CL:0000215!2.85e-09!57;CL:0000115!4.56e-09!35;CL:0000034!5.09e-09!444;CL:0000359!1.08e-08!32;CL:0000063!1.11e-08!578;CL:0002078!3.23e-08!44;CL:0000393!3.93e-08!60;CL:0000211!3.93e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.64e-09;36!CL:0000359;4.95e-08;32!CL:0000192;1.01e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.05e-19,121;CL:0002321,1.76e-13,250;CL:0000723,1.46e-11,433;CL:0000048,6.82e-11,427;CL:0000115,3.23e-10,36;CL:0000034,3.45e-10,441;CL:0000680,3.51e-10,58;CL:0000056,3.51e-10,58;CL:0000355,3.51e-10,58;CL:0000213,6.31e-10,58;CL:0000215,6.31e-10,58;CL:0000192,1.03e-09,43;CL:0000514,1.03e-09,43;CL:0000187,1.09e-09,55;CL:0002078,7.04e-09,45;CL:0000359,4.91e-08,32;CL:0000393,6.41e-08,61;CL:0000211,6.41e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.01e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.08e-12!216;UBERON:0000055!1.49e-12!69;UBERON:0002049!1.60e-12!79;UBERON:0007798!1.60e-12!79;UBERON:0001637!1.69e-12!42;UBERON:0003509!1.69e-12!42;UBERON:0004572!1.69e-12!42;UBERON:0001981!3.25e-12!60;UBERON:0007500!3.25e-12!60;UBERON:0004537!3.25e-12!60;UBERON:0006965!3.25e-12!60;UBERON:0004872!4.35e-11!84;UBERON:0000926!4.83e-11!448;UBERON:0004120!4.83e-11!448;UBERON:0006603!4.83e-11!448;UBERON:0000914!7.98e-11!83;UBERON:0002329!7.98e-11!83;UBERON:0003077!7.98e-11!83;UBERON:0003059!7.98e-11!83;UBERON:0007282!7.98e-11!83;UBERON:0009618!7.98e-11!83;UBERON:0007285!7.98e-11!83;UBERON:0000486!8.04e-11!82;UBERON:0003914!1.68e-10!118;UBERON:0004290!4.03e-10!70;UBERON:0004535!6.72e-10!110;UBERON:0005256!1.48e-09!143;UBERON:0002204!2.38e-09!167;UBERON:0001009!2.82e-09!113;UBERON:0004573!2.93e-09!33;UBERON:0004571!2.93e-09!33;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0002385!2.54e-08!63;UBERON:0001015!2.54e-08!63;UBERON:0000383!2.54e-08!63;UBERON:0000490!1.86e-07!138;UBERON:0002100!1.90e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.07e-10;42!UBERON:0003509;6.07e-10;42!UBERON:0004572;6.07e-10;42!UBERON:0004573;1.57e-08;33!UBERON:0004571;1.57e-08;33!UBERON:0003914;1.64e-08;74!UBERON:0007500;1.91e-08;56!UBERON:0001981;1.91e-08;56!UBERON:0004537;1.91e-08;56!UBERON:0000055;3.26e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.12e-17,315;UBERON:0004120,2.12e-17,315;UBERON:0006603,2.12e-17,315;UBERON:0007503,3.16e-13,78;UBERON:0000055,4.73e-13,68;UBERON:0001637,1.03e-12,42;UBERON:0003509,1.03e-12,42;UBERON:0004572,1.03e-12,42;UBERON:0007500,1.58e-12,59;UBERON:0001981,1.58e-12,59;UBERON:0004537,1.58e-12,59;UBERON:0006965,1.58e-12,59;UBERON:0003081,2.23e-12,203;UBERON:0002049,2.28e-12,78;UBERON:0007798,2.28e-12,78;UBERON:0004872,4.24e-11,83;UBERON:0003914,1.27e-10,117;UBERON:0000486,1.61e-10,83;UBERON:0002329,2.79e-10,71;UBERON:0003059,2.79e-10,71;UBERON:0007282,2.79e-10,71;UBERON:0004290,2.79e-10,71;UBERON:0009618,2.79e-10,71;UBERON:0003077,3.35e-10,72;UBERON:0007285,3.35e-10,72;UBERON:0004535,4.60e-10,109;UBERON:0002204,8.16e-10,167;UBERON:0007524,9.36e-10,73;UBERON:0001009,1.80e-09,112;UBERON:0004573,3.01e-09,33;UBERON:0004571,3.01e-09,33;UBERON:0000490,7.38e-09,148;UBERON:0001134,1.32e-08,62;UBERON:0002036,1.32e-08,62;UBERON:0003082,1.32e-08,62;UBERON:0002385,3.78e-08,64;UBERON:0001015,3.78e-08,64;UBERON:0000383,3.78e-08,64;UBERON:0005256,5.72e-08,122;UBERON:0002100,6.42e-07,199 | |||
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| ||
|short_description=p7@ARHGDIA | |||
}} | }} |
Latest revision as of 09:09, 18 September 2015
Short description: | p7@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_uc002kjk.1_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.05e-19 | 121 |
embryonic cell | 1.76e-13 | 250 |
somatic stem cell | 1.46e-11 | 433 |
multi fate stem cell | 6.82e-11 | 427 |
endothelial cell | 3.23e-10 | 36 |
stem cell | 3.45e-10 | 441 |
muscle precursor cell | 3.51e-10 | 58 |
myoblast | 3.51e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.51e-10 | 58 |
lining cell | 6.31e-10 | 58 |
barrier cell | 6.31e-10 | 58 |
smooth muscle cell | 1.03e-09 | 43 |
smooth muscle myoblast | 1.03e-09 | 43 |
muscle cell | 1.09e-09 | 55 |
meso-epithelial cell | 7.04e-09 | 45 |
vascular associated smooth muscle cell | 4.91e-08 | 32 |
electrically responsive cell | 6.41e-08 | 61 |
electrically active cell | 6.41e-08 | 61 |