FFCP PHASE1:Hg19::chr7:35293685..35293718,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:35293685..35293718,- to FFCP PHASE1:Hg19::chr7:35293685..35293718,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57057 | |EntrezGene=57057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11598 | |HGNC=11598 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR3 | |UniProt=Q9UMR3 | ||
|association_with_transcript=0bp_to_NM_001077653,NM_001166220_5end | |||
|cluster_id=chr7:35293685..35293718,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_1_at_TBX20_5end | |||
|id=chr7:35293685..35293718,- | |||
|ontology_enrichment_celltype=CL:0002494!1.03e-12!16;CL:0000359!1.68e-12!32;CL:0000187!2.28e-09!54;CL:0000183!7.31e-09!59;CL:0000393!9.92e-09!60;CL:0000211!9.92e-09!60;CL:0000192!1.74e-08!42;CL:0000514!1.74e-08!42;CL:0000680!3.49e-08!57;CL:0000056!3.49e-08!57;CL:0000355!3.49e-08!57;CL:0000222!7.51e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.83e-16;16!CL:0000359;2.52e-14;32!CL:0000192;8.57e-09;43!CL:0002539;5.88e-08;10!CL:0002548;1.21e-07;6!CL:0002569;8.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.90e-16,16;CL:0000359,1.37e-15,32;CL:0000192,2.85e-11,43;CL:0000514,2.85e-11,43;CL:0000187,2.24e-10,55;CL:0000222,8.65e-10,121;CL:0000680,2.53e-09,58;CL:0000056,2.53e-09,58;CL:0000355,2.53e-09,58;CL:0000393,5.28e-09,61;CL:0000211,5.28e-09,61;CL:0002539,5.08e-08,10;CL:0002548,1.17e-07,6;CL:0002321,3.44e-07,250;CL:0002569,7.78e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.57e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;8.41e-07;22!DOID:2994;8.41e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.57e-07,22;DOID:2994,8.57e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.38e-24!84;UBERON:0007100!2.41e-21!27;UBERON:0001009!1.31e-20!113;UBERON:0003914!1.13e-19!118;UBERON:0000948!8.57e-19!24;UBERON:0005498!8.57e-19!24;UBERON:0004140!8.57e-19!24;UBERON:0009881!8.57e-19!24;UBERON:0004141!8.57e-19!24;UBERON:0003084!8.57e-19!24;UBERON:0007005!8.57e-19!24;UBERON:0004139!8.57e-19!24;UBERON:0004291!8.57e-19!24;UBERON:0004535!1.03e-18!110;UBERON:0001637!1.60e-16!42;UBERON:0003509!1.60e-16!42;UBERON:0004572!1.60e-16!42;UBERON:0001981!1.29e-15!60;UBERON:0007500!1.29e-15!60;UBERON:0004537!1.29e-15!60;UBERON:0006965!1.29e-15!60;UBERON:0002049!5.03e-13!79;UBERON:0007798!5.03e-13!79;UBERON:0000055!1.74e-12!69;UBERON:0004573!2.46e-12!33;UBERON:0004571!2.46e-12!33;UBERON:0003081!4.22e-12!216;UBERON:0000947!7.70e-10!21;UBERON:0010191!7.70e-10!21;UBERON:0003103!1.01e-09!69;UBERON:0004290!5.51e-09!70;UBERON:0000926!2.12e-08!448;UBERON:0004120!2.12e-08!448;UBERON:0006603!2.12e-08!448;UBERON:0002385!7.39e-08!63;UBERON:0001015!7.39e-08!63;UBERON:0000383!7.39e-08!63;UBERON:0002331!1.12e-07!10;UBERON:0000358!1.12e-07!10;UBERON:0000307!1.12e-07!10;UBERON:0000091!1.12e-07!10;UBERON:0000087!1.12e-07!10;UBERON:0007806!1.12e-07!10;UBERON:0008780!1.12e-07!10;UBERON:0005728!1.12e-07!10;UBERON:0000025!1.83e-07!194;UBERON:0001134!2.46e-07!61;UBERON:0002036!2.46e-07!61;UBERON:0003082!2.46e-07!61;UBERON:0000914!9.76e-07!83;UBERON:0002329!9.76e-07!83;UBERON:0003077!9.76e-07!83;UBERON:0003059!9.76e-07!83;UBERON:0007282!9.76e-07!83;UBERON:0009618!9.76e-07!83;UBERON:0007285!9.76e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.31e-26;25!UBERON:0000948;5.40e-23;22!UBERON:0001637;1.24e-15;42!UBERON:0003509;1.24e-15;42!UBERON:0004572;1.24e-15;42!UBERON:0004573;3.60e-14;33!UBERON:0004571;3.60e-14;33!UBERON:0000947;1.05e-12;21!UBERON:0010191;1.05e-12;21!UBERON:0007500;4.27e-10;56!UBERON:0001981;4.27e-10;56!UBERON:0004537;4.27e-10;56!UBERON:0002331;1.45e-09;10!UBERON:0004237;5.88e-08;10!UBERON:0004695;5.88e-08;10!UBERON:0002111;5.88e-08;10!UBERON:0004178;5.88e-08;10!UBERON:0001009;5.98e-08;112!UBERON:0004535;7.14e-07;109!UBERON:0003422;8.00e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.33e-30,83;UBERON:0001009,1.93e-28,112;UBERON:0007100,1.15e-27,27;UBERON:0004535,7.33e-26,109;UBERON:0003914,1.53e-24,117;UBERON:0000948,2.70e-24,24;UBERON:0005498,2.70e-24,24;UBERON:0004140,2.70e-24,24;UBERON:0009881,2.70e-24,24;UBERON:0004141,2.70e-24,24;UBERON:0003084,2.70e-24,24;UBERON:0007005,2.70e-24,24;UBERON:0004139,2.70e-24,24;UBERON:0004291,2.70e-24,24;UBERON:0001637,6.87e-21,42;UBERON:0003509,6.87e-21,42;UBERON:0004572,6.87e-21,42;UBERON:0007500,1.02e-19,59;UBERON:0001981,1.02e-19,59;UBERON:0004537,1.02e-19,59;UBERON:0006965,1.02e-19,59;UBERON:0002049,2.16e-17,78;UBERON:0007798,2.16e-17,78;UBERON:0000055,5.46e-16,68;UBERON:0004573,2.22e-15,33;UBERON:0004571,2.22e-15,33;UBERON:0000947,1.06e-12,21;UBERON:0010191,1.06e-12,21;UBERON:0003104,5.69e-12,160;UBERON:0009142,5.69e-12,160;UBERON:0003081,1.13e-11,203;UBERON:0000490,3.87e-10,148;UBERON:0000025,1.17e-09,192;UBERON:0002331,1.25e-09,10;UBERON:0000358,1.25e-09,10;UBERON:0000307,1.25e-09,10;UBERON:0000091,1.25e-09,10;UBERON:0000087,1.25e-09,10;UBERON:0007010,1.25e-09,10;UBERON:0007806,1.25e-09,10;UBERON:0008780,1.25e-09,10;UBERON:0005728,1.25e-09,10;UBERON:0003103,1.83e-09,68;UBERON:0000926,5.55e-09,315;UBERON:0004120,5.55e-09,315;UBERON:0006603,5.55e-09,315;UBERON:0000483,7.57e-09,306;UBERON:0002329,7.68e-09,71;UBERON:0003059,7.68e-09,71;UBERON:0007282,7.68e-09,71;UBERON:0004290,7.68e-09,71;UBERON:0009618,7.68e-09,71;UBERON:0005256,7.88e-09,122;UBERON:0003077,1.43e-08,72;UBERON:0007285,1.43e-08,72;UBERON:0000119,1.66e-08,309;UBERON:0002385,1.99e-08,64;UBERON:0001015,1.99e-08,64;UBERON:0000383,1.99e-08,64;UBERON:0007524,2.61e-08,73;UBERON:0001134,4.18e-08,62;UBERON:0002036,4.18e-08,62;UBERON:0003082,4.18e-08,62;UBERON:0004237,5.08e-08,10;UBERON:0004695,5.08e-08,10;UBERON:0002111,5.08e-08,10;UBERON:0004178,5.08e-08,10;UBERON:0004797,2.68e-07,7;UBERON:0007503,4.00e-07,78;UBERON:0003422,7.78e-07,6;UBERON:0001048,8.95e-07,160 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.491467873003018,0,2.62129646556207,0.263766978228454,0.247532705920093,0.331397375727916,3.36162573225888,6.02694528023977,6.57279081348636,2.92759679274304,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.709446689665756,1.72372840368309,1.29096936716765,0,0.188242339542605,0.272906150057846,0.224723484445085,2.14258724659632,1.28371610830437,1.27867425159808,0.329851300186716,0.199463657621632,0,1.16083695451434,2.26954089876456,0.622822248995575,0,1.5644487552606,0,0.605399502633369,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,1.17842362989935,1.32920336750173,0.270803863765016,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.434473211648397,43.8852359365131,50.3025644777727,40.5324321043991,0,0,0,0,0,24.1063783768373,24.8336925158072,21.9586964232815,0.523916301990851,0,0,0,0,0,0,0,0,4.77029777680092,6.02164216574287,2.77712401286075,7.34900324501212,10.9069853414576,1.37559020970034,5.64286409649389,0,0,0.33472061276467,0,0,0,0,2.43042584364528,0,0,0,0,0,0,0,0,0,0,5.31848148991235,5.56118559415519,12.333974692199,3.19201543978521,34.762011208823,30.9572087616144,8.6333641946006,75.6242816021432,34.7553533939795,48.5481852246972,0,0,0.468642863667593,0,5.13424639390004,0.298897361103602,0.587172493218824,0.647491777472526,1.54495887372473,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,26.5431308594449,0.89694817844431,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.365921118388786,0.265059536642971,5.57730925773688,1.0366105501537,0,0,3.12899064659632,3.85944562915731,6.90674606762403,17.1816133371832,12.271951188383,0,0,0,0,0,0,0,0,0,0.738155454624648,8.41450642820675,6.5851841813024,14.7008711385542,1.26755034821831,0,5.90789906681404,4.41463099414651,1.35287282397425,14.7548316856732,0,0,0,0,0,0,11.5465073620219,21.3311945154141,12.2105042005255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.264145302039678,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,6.59285750364667,0,0,0,0,0,0,0.266422179016099,24.8781708965177,20.0769993994834,13.1718453884923,0,13.8602860009593,12.6712299669349,0,0,0,0,0,0,15.0963658959697,12.6348129417525,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,2.07970861530807,0,0,0,0,0,0,0,0.184369168541703,1.39013783148933,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,8.30807086693794,0.116210378459959,1.57117284469109,0,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,1.01950509218015,0,2.0148727924996,0,0,0,0,0.325378394664303,5.564214628977,9.24851594665268,8.58098799174115,0,0,0,0.870036464629098,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,1.06838442776085,0,0,0,0,6.97268323945929,11.9628691795643,7.6674099717666,7.08477234405004,3.72614221221915,7.82939692867565,1.11194531462352,2.28999818787186,0,2.21465597303108,17.3473476470681,0.767693373934002,2.99557291623744,5.40945521474092,0,0,0,0,3.23491970517306,17.4361353290309,8.42516912477962,0,0.731140468893853,0,0,10.322596532621,2.26016233240486,3.85955740482287,6.6343897524122,5.69986150829892,0,0,4.8698490471049,8.98488144489275,5.91560765317707,16.779128207874,29.0817161398839,3.5667105148125,0,0.211107635297664,0,0,0,0,0.670302275535787,0,5.36619664427641,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,5.77487913158015,16.9077749026912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619736471943,4.25846237690326,0,4.60861146462687,7.82866377623456,5.8397199599168,0,0,0,0,0,0,0,0.146508179271894,0,8.69258397364331,0,1.43246690842614,0,1.22864280839693,0,0,0,0,4.01138275443188,3.18796781201712,0,0,0,0,0,0,0,6.13886844272246,79.4079415377316,0,0,0,0,0,0,0,0,0,0,15.3651993149159,7.92909758455369,12.8306029888632,3.81974988853243,0,0,0,0,0,0,0,0,0.153900517007594,0,8.53086446235823,4.39812457607883,2.7161842980502,1.5950057986596,0.274792780205587,0.533034776018635,0,0,5.48498550270516,0,0,0,0,0.476809736941136,0,5.87638109372932,4.24059214301822,1.94749775767882,0,0,0,9.19215498909928,4.57186574102061,3.9680340812073,0,0.802577647298789,0,0,0,0,0,1.20990716048664,1.22429104652196,0,14.2807248443768,6.94710882361556,0,0,0,0,4.26914319044689,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,2.71176888936639,0,0,0,0,0,69.1587702955502,2.19790570540343,0,0,0,0,2.85780831800495,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0.859530882839914,2.10309883423452,344.355200768689,230.07706570773,97.6307313424467,79.0728841976005,175.982679735994,127.207730741867,604.180968073129,11.1692963898145,0,0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| ||
|short_description=p1@TBX20 | |||
}} | }} |
Latest revision as of 09:08, 18 September 2015
Short description: | p1@TBX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBX20_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_NM_001077653, NM_001166220_5end |
EntrezGene: | TBX20 |
HGNC: | 11598 |
UniProt: | Q9UMR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.90e-16 | 16 |
vascular associated smooth muscle cell | 1.37e-15 | 32 |
smooth muscle cell | 2.85e-11 | 43 |
smooth muscle myoblast | 2.85e-11 | 43 |
muscle cell | 2.24e-10 | 55 |
mesodermal cell | 8.65e-10 | 121 |
muscle precursor cell | 2.53e-09 | 58 |
myoblast | 2.53e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.53e-09 | 58 |
electrically responsive cell | 5.28e-09 | 61 |
electrically active cell | 5.28e-09 | 61 |
aortic smooth muscle cell | 5.08e-08 | 10 |
cardiac fibroblast | 1.17e-07 | 6 |
embryonic cell | 3.44e-07 | 250 |
mesenchymal stem cell of umbilical cord | 7.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.57e-07 | 22 |
germ cell cancer | 8.57e-07 | 22 |