FFCP PHASE1:Hg19::chr11:5711010..5711105,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZK6 | |||
|association_with_transcript=0bp_to_ENST00000460454,ENST00000545338_5end | |||
|cluster_id=chr11:5711010..5711105,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_TRIM22_5end | |||
|id=chr11:5711010..5711105,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.15e-34!140;CL:0002087!1.40e-33!119;CL:0002031!1.14e-28!124;CL:0000037!6.51e-25!172;CL:0000566!6.51e-25!172;CL:0002057!7.40e-24!42;CL:0000988!3.65e-23!182;CL:0002032!6.72e-23!165;CL:0000837!6.72e-23!165;CL:0000860!1.37e-19!45;CL:0000766!1.14e-18!76;CL:0002194!2.91e-17!63;CL:0000576!2.91e-17!63;CL:0000040!2.91e-17!63;CL:0000559!2.91e-17!63;CL:0002009!1.19e-16!65;CL:0000048!3.58e-16!430;CL:0000557!1.48e-15!71;CL:0000034!1.57e-15!444;CL:0000723!2.88e-15!436;CL:0000838!6.93e-15!52;CL:0000542!1.00e-14!53;CL:0000051!1.00e-14!53;CL:0000839!2.19e-14!70;CL:0000134!2.50e-14!358;CL:0002320!4.64e-13!365;CL:0000219!9.03e-10!390;CL:0000763!9.53e-10!112;CL:0000049!9.53e-10!112;CL:0000945!1.86e-09!24;CL:0000826!1.86e-09!24;CL:0000791!1.34e-08!18;CL:0000789!1.34e-08!18;CL:0002420!1.34e-08!18;CL:0002419!1.34e-08!18;CL:0000790!1.34e-08!18;CL:0000236!6.34e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-17;33!CL:0002057;1.59e-17;33!CL:0000473;1.63e-14;39!CL:0000234;1.63e-14;39!CL:0000576;4.64e-14;48!CL:0002087;7.35e-12;104!CL:0000766;2.13e-10;69!CL:0000945;1.76e-09;24!CL:0000542;3.23e-09;53!CL:0000791;1.29e-08;18!CL:0000789;1.29e-08;18!CL:0002419;1.29e-08;18!CL:0000738;3.35e-08;136!CL:0000236;1.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.39e-37,136;CL:0002087,4.61e-37,115;CL:0002031,1.15e-31,120;CL:0000037,3.34e-27,168;CL:0000988,9.54e-26,177;CL:0002032,4.03e-25,161;CL:0000837,4.03e-25,161;CL:0000860,6.36e-24,42;CL:0002057,6.36e-24,42;CL:0000473,1.60e-23,48;CL:0000234,1.60e-23,48;CL:0000766,6.42e-22,72;CL:0002194,9.25e-21,59;CL:0000576,9.25e-21,59;CL:0000040,9.25e-21,59;CL:0000559,9.25e-21,59;CL:0002009,5.42e-20,61;CL:0000557,1.47e-18,67;CL:0000839,3.31e-17,66;CL:0000048,4.17e-17,427;CL:0000034,1.71e-16,441;CL:0000723,3.18e-16,433;CL:0000134,2.42e-15,354;CL:0000838,7.91e-15,52;CL:0000542,1.14e-14,53;CL:0000051,1.14e-14,53;CL:0002320,5.18e-14,361;CL:0000763,2.11e-11,108;CL:0000049,2.11e-11,108;CL:0000219,1.30e-10,386;CL:0000945,1.77e-09,24;CL:0000826,1.77e-09,24;CL:0000791,1.28e-08,18;CL:0000789,1.28e-08,18;CL:0002420,1.28e-08,18;CL:0002419,1.28e-08,18;CL:0000790,1.28e-08,18;CL:0000236,6.07e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-17;42!CL:0000051;3.23e-09;53!CL:0000790;1.29e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.58e-24!112;UBERON:0002390!6.55e-23!102;UBERON:0003061!6.55e-23!102;UBERON:0002371!6.22e-15!80;UBERON:0002384!4.19e-12!375;UBERON:0003081!3.23e-11!216;UBERON:0001474!4.89e-11!86;UBERON:0002405!1.48e-10!115;UBERON:0004765!3.60e-10!101;UBERON:0001434!3.60e-10!101;UBERON:0002204!1.88e-09!167;UBERON:0000178!7.43e-08!15;UBERON:0000179!7.43e-08!15;UBERON:0000463!7.43e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.02e-08;15!UBERON:0000179;7.02e-08;15!UBERON:0000463;7.02e-08;15!UBERON:0002390;3.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.57e-27,108;UBERON:0002390,7.09e-26,98;UBERON:0003061,7.09e-26,98;UBERON:0002405,1.50e-20,93;UBERON:0002371,1.56e-17,76;UBERON:0003081,5.71e-15,203;UBERON:0001474,3.33e-13,82;UBERON:0002384,5.83e-13,371;UBERON:0004765,2.98e-12,90;UBERON:0001434,3.07e-11,100;UBERON:0002204,4.09e-10,167;UBERON:0000926,1.16e-09,315;UBERON:0004120,1.16e-09,315;UBERON:0006603,1.16e-09,315;UBERON:0000178,7.11e-08,15;UBERON:0000179,7.11e-08,15;UBERON:0000463,7.11e-08,15 | |||
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| |||
|short_description=p1@TRIM22 | |||
}} |
Latest revision as of 09:06, 18 September 2015
Short description: | p1@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM22_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000460454, ENST00000545338_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | F5GZK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.57e-27 | 108 |
hematopoietic system | 7.09e-26 | 98 |
blood island | 7.09e-26 | 98 |
immune system | 1.50e-20 | 93 |
bone marrow | 1.56e-17 | 76 |
lateral plate mesoderm | 5.71e-15 | 203 |
bone element | 3.33e-13 | 82 |
connective tissue | 5.83e-13 | 371 |
skeletal element | 2.98e-12 | 90 |
skeletal system | 3.07e-11 | 100 |
musculoskeletal system | 4.09e-10 | 167 |
mesoderm | 1.16e-09 | 315 |
mesoderm-derived structure | 1.16e-09 | 315 |
presumptive mesoderm | 1.16e-09 | 315 |
blood | 7.11e-08 | 15 |
haemolymphatic fluid | 7.11e-08 | 15 |
organism substance | 7.11e-08 | 15 |