FFCP PHASE1:Hg19::chr12:4433835..4433850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57103 | |EntrezGene=57103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1185 | |HGNC=1185 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000539671_5end | |association_with_transcript=26bp_to_ENST00000539671_5end | ||
|cluster_id=chr12:4433835..4433850,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_3_at_C12orf5_5end | |description=CAGE_peak_3_at_C12orf5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!9.14e-18!3;CL:0002336!1.61e-13!1;CL:0002261!1.61e-13!1;CL:0002170!1.61e-13!1;CL:0000039!4.75e-08!7;CL:0000586!4.75e-08!7 | |ontology_enrichment_celltype=CL:0002541!9.14e-18!3;CL:0002336!1.61e-13!1;CL:0002261!1.61e-13!1;CL:0002170!1.61e-13!1;CL:0000039!4.75e-08!7;CL:0000586!4.75e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.83e-14;3!CL:0000039;6.04e-07;7!CL:0000586;6.04e-07;7 | |ontology_enrichment_celltype_v019=CL:0002541;1.83e-14;3!CL:0000039;6.04e-07;7!CL:0000586;6.04e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.83e-14,3;CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.51e-17;10!UBERON:0005564;7.51e-17;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.51e-17;10!UBERON:0005564;7.51e-17;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!9.14e-18!3;UBERON:0000920!9.14e-18!3;UBERON:0003124!8.38e-17!7;UBERON:0000473!1.06e-14!8;UBERON:0003112!1.25e-13!1;UBERON:0000032!1.25e-13!1;UBERON:0005253!1.25e-13!1;UBERON:0003128!1.25e-13!1;UBERON:0002241!1.25e-13!1;UBERON:0001703!1.25e-13!1;UBERON:0004761!1.25e-13!1;UBERON:0009617!1.25e-13!1;UBERON:0003135!7.47e-11!11;UBERON:0000991!9.42e-10!21;UBERON:0009196!9.42e-10!21;UBERON:0009117!9.42e-10!21;UBERON:0005564!9.42e-10!21;UBERON:0004176!2.55e-09!22;UBERON:0005631!1.09e-08!14;UBERON:0000158!1.09e-08!14 | |ontology_enrichment_uberon=UBERON:0000476!9.14e-18!3;UBERON:0000920!9.14e-18!3;UBERON:0003124!8.38e-17!7;UBERON:0000473!1.06e-14!8;UBERON:0003112!1.25e-13!1;UBERON:0000032!1.25e-13!1;UBERON:0005253!1.25e-13!1;UBERON:0003128!1.25e-13!1;UBERON:0002241!1.25e-13!1;UBERON:0001703!1.25e-13!1;UBERON:0004761!1.25e-13!1;UBERON:0009617!1.25e-13!1;UBERON:0003135!7.47e-11!11;UBERON:0000991!9.42e-10!21;UBERON:0009196!9.42e-10!21;UBERON:0009117!9.42e-10!21;UBERON:0005564!9.42e-10!21;UBERON:0004176!2.55e-09!22;UBERON:0005631!1.09e-08!14;UBERON:0000158!1.09e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.98e-21;8!UBERON:0003135;2.02e-15;11!UBERON:0003124;1.83e-14;3!UBERON:0000920;1.83e-14;3!UBERON:0000991;1.42e-08;21!UBERON:0003101;3.15e-08;22!UBERON:0000079;3.15e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.98e-21;8!UBERON:0003135;2.02e-15;11!UBERON:0003124;1.83e-14;3!UBERON:0000920;1.83e-14;3!UBERON:0000991;1.42e-08;21!UBERON:0003101;3.15e-08;22!UBERON:0000079;3.15e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.92e-21,8;UBERON:0003135,2.17e-15,11;UBERON:0000920,1.83e-14,3;UBERON:0000991,1.48e-08,21;UBERON:0009196,1.48e-08,21;UBERON:0009117,1.48e-08,21;UBERON:0005564,1.48e-08,21;UBERON:0004176,3.27e-08,22;UBERON:0003101,3.27e-08,22;UBERON:0000079,3.27e-08,22;UBERON:0003124,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84451123510448,0,0,0,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8128473061881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,1.36401656792831,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84451123510448,0,0,0,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8128473061881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,1.36401656792831,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@C12orf5 | |short_description=p3@C12orf5 | ||
}} | }} |
Latest revision as of 09:06, 18 September 2015
Short description: | p3@C12orf5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C12orf5_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 26bp_to_ENST00000539671_5end |
EntrezGene: | C12orf5 |
HGNC: | 1185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.83e-14 | 3 |
germ line cell | 5.70e-07 | 7 |
germ cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.92e-21 | 8 |
male reproductive organ | 2.17e-15 | 11 |
egg chorion | 1.83e-14 | 3 |
gonad | 1.48e-08 | 21 |
indifferent external genitalia | 1.48e-08 | 21 |
indifferent gonad | 1.48e-08 | 21 |
gonad primordium | 1.48e-08 | 21 |
external genitalia | 3.27e-08 | 22 |
male organism | 3.27e-08 | 22 |
male reproductive system | 3.27e-08 | 22 |
chorion | 6.04e-07 | 7 |