FFCP PHASE1:Hg19::chr11:5710977..5711002,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:5710977..5711002,+ to FFCP PHASE1:Hg19::chr11:5710977..5711002,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10346 | |EntrezGene=10346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |HGNC=16379 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000460454_5end | |||
|cluster_id=chr11:5710977..5711002,+ | |||
|description=CAGE_peak_3_at_TRIM22_5end | |||
|id=chr11:5710977..5711002,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.47e-18!119;CL:0000738!5.60e-17!140;CL:0002031!1.98e-15!124;CL:0002057!9.88e-14!42;CL:0000766!2.95e-11!76;CL:0000860!3.68e-11!45;CL:0000048!1.90e-10!430;CL:0002194!2.33e-10!63;CL:0000576!2.33e-10!63;CL:0000040!2.33e-10!63;CL:0000559!2.33e-10!63;CL:0000723!6.34e-10!436;CL:0000034!6.69e-10!444;CL:0002009!1.42e-09!65;CL:0000037!1.65e-09!172;CL:0000566!1.65e-09!172;CL:0000557!5.21e-09!71;CL:0002032!8.83e-09!165;CL:0000837!8.83e-09!165;CL:0000839!1.17e-08!70;CL:0000134!1.87e-08!358;CL:0000791!1.89e-08!18;CL:0000789!1.89e-08!18;CL:0002420!1.89e-08!18;CL:0002419!1.89e-08!18;CL:0000790!1.89e-08!18;CL:0000838!3.15e-08!52;CL:0000542!6.49e-08!53;CL:0000051!6.49e-08!53;CL:0000988!1.87e-07!182;CL:0002320!2.31e-07!365;CL:0000625!4.24e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-09;33!CL:0002057;1.45e-09;33!CL:0000473;1.73e-09;39!CL:0000234;1.73e-09;39!CL:0000576;8.95e-09;48!CL:0000791;9.96e-09;18!CL:0000789;9.96e-09;18!CL:0002419;9.96e-09;18!CL:0002087;1.42e-07;104!CL:0000625;1.76e-07;11!CL:0000766;4.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.62e-20,115;CL:0000738,1.10e-18,136;CL:0002031,3.93e-17,120;CL:0000473,5.89e-16,48;CL:0000234,5.89e-16,48;CL:0000860,2.11e-14,42;CL:0002057,2.11e-14,42;CL:0000766,3.70e-13,72;CL:0002194,1.15e-12,59;CL:0000576,1.15e-12,59;CL:0000040,1.15e-12,59;CL:0000559,1.15e-12,59;CL:0002009,7.67e-12,61;CL:0000048,1.05e-11,427;CL:0000723,2.84e-11,433;CL:0000034,3.43e-11,441;CL:0000037,5.12e-11,168;CL:0000557,9.28e-11,67;CL:0000839,2.57e-10,66;CL:0002032,3.94e-10,161;CL:0000837,3.94e-10,161;CL:0000134,8.12e-10,354;CL:0000988,1.11e-08,177;CL:0000791,1.31e-08,18;CL:0000789,1.31e-08,18;CL:0002420,1.31e-08,18;CL:0002419,1.31e-08,18;CL:0000790,1.31e-08,18;CL:0002320,1.99e-08,361;CL:0000838,4.08e-08,52;CL:0000542,1.22e-07,53;CL:0000051,1.22e-07,53;CL:0000625,2.09e-07,11;CL:0000219,9.89e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.18e-10;42!CL:0000790;9.96e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.33e-14!112;UBERON:0002390!9.58e-13!102;UBERON:0003061!9.58e-13!102;UBERON:0003081!2.94e-10!216;UBERON:0002371!4.35e-09!80;UBERON:0004535!1.40e-08!110;UBERON:0001009!7.13e-08!113;UBERON:0002204!1.18e-07!167;UBERON:0004765!9.54e-07!101;UBERON:0001434!9.54e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.11e-15,108;UBERON:0002390,1.20e-14,98;UBERON:0003061,1.20e-14,98;UBERON:0003081,1.67e-13,203;UBERON:0002405,7.26e-13,93;UBERON:0000926,1.40e-12,315;UBERON:0004120,1.40e-12,315;UBERON:0006603,1.40e-12,315;UBERON:0002371,5.44e-11,76;UBERON:0001474,2.06e-08,82;UBERON:0004535,5.88e-08,109;UBERON:0002384,6.72e-08,371;UBERON:0002204,9.29e-08,167;UBERON:0004765,1.87e-07,90;UBERON:0001434,2.44e-07,100;UBERON:0001009,2.90e-07,112;UBERON:0000055,6.29e-07,68;UBERON:0002049,9.80e-07,78;UBERON:0007798,9.80e-07,78 | |||
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| ||
|short_description=p3@TRIM22 | |||
}} | }} |
Latest revision as of 09:05, 18 September 2015
Short description: | p3@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000460454_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.11e-15 | 108 |
hematopoietic system | 1.20e-14 | 98 |
blood island | 1.20e-14 | 98 |
lateral plate mesoderm | 1.67e-13 | 203 |
immune system | 7.26e-13 | 93 |
mesoderm | 1.40e-12 | 315 |
mesoderm-derived structure | 1.40e-12 | 315 |
presumptive mesoderm | 1.40e-12 | 315 |
bone marrow | 5.44e-11 | 76 |
bone element | 2.06e-08 | 82 |
cardiovascular system | 5.88e-08 | 109 |
connective tissue | 6.72e-08 | 371 |
musculoskeletal system | 9.29e-08 | 167 |
skeletal element | 1.87e-07 | 90 |
skeletal system | 2.44e-07 | 100 |
circulatory system | 2.90e-07 | 112 |
vessel | 6.29e-07 | 68 |
vasculature | 9.80e-07 | 78 |
vascular system | 9.80e-07 | 78 |