FFCP PHASE1:Hg19::chr17:79826166..79826184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=314bp_to_BC007630_5end | |association_with_transcript=314bp_to_BC007630_5end | ||
|cluster_id=chr17:79826166..79826184,- | |||
|description=CAGE_peak_14_at_ARHGDIA_5end | |description=CAGE_peak_14_at_ARHGDIA_5end | ||
|id=chr17:79826166..79826184,- | |id=chr17:79826166..79826184,- | ||
|ontology_enrichment_celltype=CL:0002371!2.47e-13!591;CL:0000144!1.95e-12!625;CL:0000055!3.30e-12!180;CL:0000220!1.45e-11!246;CL:0002321!2.01e-11!248;CL:0000222!2.08e-11!119;CL:0000548!7.13e-10!679;CL:0000004!7.13e-10!679;CL:0000255!7.13e-10!679;CL:0000012!1.29e-09!682;CL:0000183!9.26e-08!59;CL:0000192!1.15e-07!42;CL:0000514!1.15e-07!42;CL:0000115!2.72e-07!35;CL:0000003!4.37e-07!722;CL:0000057!5.30e-07!75;CL:0002078!7.08e-07!44;CL:0000187!8.36e-07!54 | |ontology_enrichment_celltype=CL:0002371!2.47e-13!591;CL:0000144!1.95e-12!625;CL:0000055!3.30e-12!180;CL:0000220!1.45e-11!246;CL:0002321!2.01e-11!248;CL:0000222!2.08e-11!119;CL:0000548!7.13e-10!679;CL:0000004!7.13e-10!679;CL:0000255!7.13e-10!679;CL:0000012!1.29e-09!682;CL:0000183!9.26e-08!59;CL:0000192!1.15e-07!42;CL:0000514!1.15e-07!42;CL:0000115!2.72e-07!35;CL:0000003!4.37e-07!722;CL:0000057!5.30e-07!75;CL:0002078!7.08e-07!44;CL:0000187!8.36e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.71e-07;12!CL:0000115;3.37e-07;36!CL:0000192;4.36e-07;43!CL:0000359;6.13e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.01e-13,121;CL:0002321,6.61e-12,250;CL:0000192,5.48e-09,43;CL:0000514,5.48e-09,43;CL:0000115,2.19e-08,36;CL:0000187,8.71e-08,55;CL:0002078,1.07e-07,45;CL:0002334,1.60e-07,12;CL:0000213,1.69e-07,58;CL:0000215,1.69e-07,58;CL:0000359,1.83e-07,32;CL:0000723,4.50e-07,433;CL:0000680,6.29e-07,58;CL:0000056,6.29e-07,58;CL:0000355,6.29e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.36e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.07e-11!69;UBERON:0001981!4.32e-10!60;UBERON:0007500!4.32e-10!60;UBERON:0004537!4.32e-10!60;UBERON:0006965!4.32e-10!60;UBERON:0001637!5.11e-10!42;UBERON:0003509!5.11e-10!42;UBERON:0004572!5.11e-10!42;UBERON:0000926!1.21e-09!448;UBERON:0004120!1.21e-09!448;UBERON:0006603!1.21e-09!448;UBERON:0002049!2.20e-09!79;UBERON:0007798!2.20e-09!79;UBERON:0004872!2.63e-09!84;UBERON:0005256!1.97e-08!143;UBERON:0003081!2.13e-08!216;UBERON:0003914!2.37e-08!118;UBERON:0002100!6.49e-08!216;UBERON:0003102!7.36e-08!95;UBERON:0000486!2.67e-07!82;UBERON:0004573!7.49e-07!33;UBERON:0004571!7.49e-07!33;UBERON:0004290!7.93e-07!70;UBERON:0000914!9.09e-07!83;UBERON:0002329!9.09e-07!83;UBERON:0003077!9.09e-07!83;UBERON:0003059!9.09e-07!83;UBERON:0007282!9.09e-07!83;UBERON:0009618!9.09e-07!83;UBERON:0007285!9.09e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.27e-08;56!UBERON:0001981;2.27e-08;56!UBERON:0004537;2.27e-08;56!UBERON:0001637;2.61e-08;42!UBERON:0003509;2.61e-08;42!UBERON:0004572;2.61e-08;42!UBERON:0003513;9.87e-08;7!UBERON:0000055;1.30e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.67e-13,68;UBERON:0007500,2.65e-13,59;UBERON:0001981,2.65e-13,59;UBERON:0004537,2.65e-13,59;UBERON:0006965,2.65e-13,59;UBERON:0001637,4.56e-12,42;UBERON:0003509,4.56e-12,42;UBERON:0004572,4.56e-12,42;UBERON:0000926,7.27e-12,315;UBERON:0004120,7.27e-12,315;UBERON:0006603,7.27e-12,315;UBERON:0002049,3.07e-11,78;UBERON:0007798,3.07e-11,78;UBERON:0004872,3.73e-11,83;UBERON:0003914,1.76e-10,117;UBERON:0000490,8.79e-10,148;UBERON:0007503,2.80e-09,78;UBERON:0003081,5.19e-09,203;UBERON:0005256,6.04e-09,122;UBERON:0002100,1.12e-08,199;UBERON:0000486,4.44e-08,83;UBERON:0003102,5.00e-08,99;UBERON:0004535,6.56e-08,109;UBERON:0003513,7.31e-08,7;UBERON:0004573,1.79e-07,33;UBERON:0004571,1.79e-07,33;UBERON:0002329,1.80e-07,71;UBERON:0003059,1.80e-07,71;UBERON:0007282,1.80e-07,71;UBERON:0004290,1.80e-07,71;UBERON:0009618,1.80e-07,71;UBERON:0007524,1.87e-07,73;UBERON:0001009,2.46e-07,112;UBERON:0003077,3.17e-07,72;UBERON:0007285,3.17e-07,72;UBERON:0001134,4.56e-07,62;UBERON:0002036,4.56e-07,62;UBERON:0003082,4.56e-07,62 | |||
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| ||
|short_description=p14@ARHGDIA | |short_description=p14@ARHGDIA | ||
}} | }} |
Latest revision as of 08:56, 18 September 2015
Short description: | p14@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 314bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.01e-13 | 121 |
embryonic cell | 6.61e-12 | 250 |
smooth muscle cell | 5.48e-09 | 43 |
smooth muscle myoblast | 5.48e-09 | 43 |
endothelial cell | 2.19e-08 | 36 |
muscle cell | 8.71e-08 | 55 |
meso-epithelial cell | 1.07e-07 | 45 |
preadipocyte | 1.60e-07 | 12 |
lining cell | 1.69e-07 | 58 |
barrier cell | 1.69e-07 | 58 |
vascular associated smooth muscle cell | 1.83e-07 | 32 |
somatic stem cell | 4.50e-07 | 433 |
muscle precursor cell | 6.29e-07 | 58 |
myoblast | 6.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.29e-07 | 58 |