FFCP PHASE1:Hg19::chr1:46769046..46769057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10489 | |EntrezGene=10489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16917 | |HGNC=16917 | ||
|TSSclassifier=strong | |||
|UniProt=Q15345 | |UniProt=Q15345 | ||
|association_with_transcript=-8bp_to_NM_006369,uc001cpn.2,uc001cpo.1,uc010omb.1_5end | |association_with_transcript=-8bp_to_NM_006369,uc001cpn.2,uc001cpo.1,uc010omb.1_5end | ||
|cluster_id=chr1:46769046..46769057,- | |||
|description=CAGE_peak_6_at_LRRC41_5end | |description=CAGE_peak_6_at_LRRC41_5end | ||
|id=chr1:46769046..46769057,- | |id=chr1:46769046..46769057,- | ||
|ontology_enrichment_celltype=CL:0000222!1.02e-15!119;CL:0000183!2.05e-14!59;CL:0000680!3.62e-14!57;CL:0000056!3.62e-14!57;CL:0000355!3.62e-14!57;CL:0000220!3.98e-14!246;CL:0002321!1.06e-13!248;CL:0000187!2.97e-13!54;CL:0000055!4.01e-13!180;CL:0000393!6.74e-11!60;CL:0000211!6.74e-11!60;CL:0000192!2.37e-10!42;CL:0000514!2.37e-10!42;CL:0002371!3.60e-08!591;CL:0000359!3.45e-07!32 | |ontology_enrichment_celltype=CL:0000222!1.02e-15!119;CL:0000183!2.05e-14!59;CL:0000680!3.62e-14!57;CL:0000056!3.62e-14!57;CL:0000355!3.62e-14!57;CL:0000220!3.98e-14!246;CL:0002321!1.06e-13!248;CL:0000187!2.97e-13!54;CL:0000055!4.01e-13!180;CL:0000393!6.74e-11!60;CL:0000211!6.74e-11!60;CL:0000192!2.37e-10!42;CL:0000514!2.37e-10!42;CL:0002371!3.60e-08!591;CL:0000359!3.45e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;3.34e-09;55!CL:0000192;4.96e-09;43!CL:1000497;6.37e-08;17!CL:0002518;6.37e-08;17!CL:0000359;6.59e-08;32!CL:1000449;7.94e-08;15!CL:0000393;4.37e-07;61!CL:0000211;4.37e-07;61 | |ontology_enrichment_celltype_v019=CL:0000187;3.34e-09;55!CL:0000192;4.96e-09;43!CL:1000497;6.37e-08;17!CL:0002518;6.37e-08;17!CL:0000359;6.59e-08;32!CL:1000449;7.94e-08;15!CL:0000393;4.37e-07;61!CL:0000211;4.37e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.74e-17,121;CL:0000680,2.82e-17,58;CL:0000056,2.82e-17,58;CL:0000355,2.82e-17,58;CL:0002321,2.98e-16,250;CL:0000187,7.23e-16,55;CL:0000393,7.09e-14,61;CL:0000211,7.09e-14,61;CL:0000192,4.22e-13,43;CL:0000514,4.22e-13,43;CL:0000359,1.02e-08,32;CL:1000497,2.33e-08,17;CL:0002518,2.33e-08,17;CL:1000449,3.00e-08,15;CL:1000507,3.20e-07,10;CL:1000494,3.20e-07,10;CL:0002078,9.49e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;4.96e-09;43!CL:0000355;5.70e-09;58 | |ontology_enrichment_development_v019=CL:0000514;4.96e-09;43!CL:0000355;5.70e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.58e-19!312;UBERON:0000483!5.46e-19!309;UBERON:0000486!1.67e-15!82;UBERON:0005256!1.81e-15!143;UBERON:0004290!4.72e-15!70;UBERON:0000914!1.60e-14!83;UBERON:0002329!1.60e-14!83;UBERON:0003077!1.60e-14!83;UBERON:0003059!1.60e-14!83;UBERON:0007282!1.60e-14!83;UBERON:0009618!1.60e-14!83;UBERON:0007285!1.60e-14!83;UBERON:0001134!6.89e-14!61;UBERON:0002036!6.89e-14!61;UBERON:0003082!6.89e-14!61;UBERON:0000475!6.96e-14!365;UBERON:0002385!9.61e-14!63;UBERON:0001015!9.61e-14!63;UBERON:0000383!9.61e-14!63;UBERON:0000490!1.17e-13!138;UBERON:0002100!1.46e-12!216;UBERON:0003914!2.16e-11!118;UBERON:0000481!2.17e-11!347;UBERON:0000923!2.54e-10!604;UBERON:0005291!2.54e-10!604;UBERON:0006598!2.54e-10!604;UBERON:0002532!2.54e-10!604;UBERON:0002050!4.38e-10!605;UBERON:0005423!4.38e-10!605;UBERON:0000467!1.77e-09!625;UBERON:0000922!1.97e-09!612;UBERON:0000468!1.98e-09!659;UBERON:0000480!3.01e-09!626;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0004111!2.49e-08!241;UBERON:0000025!2.63e-08!194;UBERON:0003104!3.01e-08!238;UBERON:0009142!3.01e-08!238;UBERON:0000055!5.02e-08!69;UBERON:0001981!7.69e-08!60;UBERON:0007500!7.69e-08!60;UBERON:0004537!7.69e-08!60;UBERON:0006965!7.69e-08!60;UBERON:0004872!1.03e-07!84;UBERON:0001637!1.09e-07!42;UBERON:0003509!1.09e-07!42;UBERON:0004572!1.09e-07!42;UBERON:0000477!2.38e-07!286;UBERON:0004535!9.03e-07!110;UBERON:0001009!9.27e-07!113 | |ontology_enrichment_uberon=UBERON:0000119!1.58e-19!312;UBERON:0000483!5.46e-19!309;UBERON:0000486!1.67e-15!82;UBERON:0005256!1.81e-15!143;UBERON:0004290!4.72e-15!70;UBERON:0000914!1.60e-14!83;UBERON:0002329!1.60e-14!83;UBERON:0003077!1.60e-14!83;UBERON:0003059!1.60e-14!83;UBERON:0007282!1.60e-14!83;UBERON:0009618!1.60e-14!83;UBERON:0007285!1.60e-14!83;UBERON:0001134!6.89e-14!61;UBERON:0002036!6.89e-14!61;UBERON:0003082!6.89e-14!61;UBERON:0000475!6.96e-14!365;UBERON:0002385!9.61e-14!63;UBERON:0001015!9.61e-14!63;UBERON:0000383!9.61e-14!63;UBERON:0000490!1.17e-13!138;UBERON:0002100!1.46e-12!216;UBERON:0003914!2.16e-11!118;UBERON:0000481!2.17e-11!347;UBERON:0000923!2.54e-10!604;UBERON:0005291!2.54e-10!604;UBERON:0006598!2.54e-10!604;UBERON:0002532!2.54e-10!604;UBERON:0002050!4.38e-10!605;UBERON:0005423!4.38e-10!605;UBERON:0000467!1.77e-09!625;UBERON:0000922!1.97e-09!612;UBERON:0000468!1.98e-09!659;UBERON:0000480!3.01e-09!626;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0004111!2.49e-08!241;UBERON:0000025!2.63e-08!194;UBERON:0003104!3.01e-08!238;UBERON:0009142!3.01e-08!238;UBERON:0000055!5.02e-08!69;UBERON:0001981!7.69e-08!60;UBERON:0007500!7.69e-08!60;UBERON:0004537!7.69e-08!60;UBERON:0006965!7.69e-08!60;UBERON:0004872!1.03e-07!84;UBERON:0001637!1.09e-07!42;UBERON:0003509!1.09e-07!42;UBERON:0004572!1.09e-07!42;UBERON:0000477!2.38e-07!286;UBERON:0004535!9.03e-07!110;UBERON:0001009!9.27e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.94e-08;15!UBERON:0004819;7.94e-08;15!UBERON:0001285;7.94e-08;15!UBERON:0007684;7.94e-08;15!UBERON:0003914;1.00e-07;74!UBERON:0007196;2.59e-07;15!UBERON:0001558;2.59e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0006555;7.94e-08;15!UBERON:0004819;7.94e-08;15!UBERON:0001285;7.94e-08;15!UBERON:0007684;7.94e-08;15!UBERON:0003914;1.00e-07;74!UBERON:0007196;2.59e-07;15!UBERON:0001558;2.59e-07;15 | ||
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| ||
|short_description=p6@LRRC41 | |short_description=p6@LRRC41 | ||
}} | }} |
Latest revision as of 08:53, 18 September 2015
Short description: | p6@LRRC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRRC41_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_NM_006369, uc001cpn.2, uc001cpo.1, uc010omb.1_5end |
EntrezGene: | LRRC41 |
HGNC: | 16917 |
UniProt: | Q15345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.74e-17 | 121 |
muscle precursor cell | 2.82e-17 | 58 |
myoblast | 2.82e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-17 | 58 |
embryonic cell | 2.98e-16 | 250 |
muscle cell | 7.23e-16 | 55 |
electrically responsive cell | 7.09e-14 | 61 |
electrically active cell | 7.09e-14 | 61 |
smooth muscle cell | 4.22e-13 | 43 |
smooth muscle myoblast | 4.22e-13 | 43 |
vascular associated smooth muscle cell | 1.02e-08 | 32 |
kidney cell | 2.33e-08 | 17 |
kidney epithelial cell | 2.33e-08 | 17 |
epithelial cell of nephron | 3.00e-08 | 15 |
kidney tubule cell | 3.20e-07 | 10 |
nephron tubule epithelial cell | 3.20e-07 | 10 |
meso-epithelial cell | 9.49e-07 | 45 |