FFCP PHASE1:Hg19::chr1:16370308..16370321,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1188 | |EntrezGene=1188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2027 | |HGNC=2027 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDY8,P51801 | |UniProt=E9PDY8,P51801 | ||
|association_with_transcript=36bp_to_ENST00000331579,ENST00000375679_5end | |association_with_transcript=36bp_to_ENST00000331579,ENST00000375679_5end | ||
|cluster_id=chr1:16370308..16370321,+ | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_3_at_CLCNKB_5end | |description=CAGE_peak_3_at_CLCNKB_5end | ||
|id=chr1:16370308..16370321,+ | |id=chr1:16370308..16370321,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.10e-23;1!UBERON:0008801;4.59e-23;1!UBERON:0003918;6.20e-10;10!UBERON:0007687;6.20e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.07e-27!2;UBERON:0001044!8.91e-21!6;UBERON:0003293!8.91e-21!6;UBERON:0003294!8.91e-21!6;UBERON:0010047!8.91e-21!6;UBERON:0000167!8.91e-21!6;UBERON:0006947!2.12e-18!3;UBERON:0004054!2.12e-18!3;UBERON:0001736!7.13e-15!1;UBERON:0006298!7.13e-15!1;UBERON:0001831!1.23e-14!1;UBERON:0001567!1.23e-14!1;UBERON:0008801!1.23e-14!1;UBERON:0000998!1.84e-14!1;UBERON:0006868!1.84e-14!1;UBERON:0001000!2.11e-14!1;UBERON:0005352!2.11e-14!1;UBERON:0005904!4.70e-14!4;UBERON:0003408!1.00e-12!10;UBERON:0002046!1.85e-11!5;UBERON:0004117!1.85e-11!5;UBERON:0007689!1.85e-11!5;UBERON:0007123!1.85e-11!5;UBERON:0003091!1.85e-11!5;UBERON:0002530!1.92e-10!59;UBERON:0007023!2.43e-08!115;UBERON:0004089!5.74e-08!2;UBERON:0000341!8.60e-08!2;UBERON:0000078!2.62e-07!18 | |ontology_enrichment_uberon=UBERON:0001829!1.07e-27!2;UBERON:0001044!8.91e-21!6;UBERON:0003293!8.91e-21!6;UBERON:0003294!8.91e-21!6;UBERON:0010047!8.91e-21!6;UBERON:0000167!8.91e-21!6;UBERON:0006947!2.12e-18!3;UBERON:0004054!2.12e-18!3;UBERON:0001736!7.13e-15!1;UBERON:0006298!7.13e-15!1;UBERON:0001831!1.23e-14!1;UBERON:0001567!1.23e-14!1;UBERON:0008801!1.23e-14!1;UBERON:0000998!1.84e-14!1;UBERON:0006868!1.84e-14!1;UBERON:0001000!2.11e-14!1;UBERON:0005352!2.11e-14!1;UBERON:0005904!4.70e-14!4;UBERON:0003408!1.00e-12!10;UBERON:0002046!1.85e-11!5;UBERON:0004117!1.85e-11!5;UBERON:0007689!1.85e-11!5;UBERON:0007123!1.85e-11!5;UBERON:0003091!1.85e-11!5;UBERON:0002530!1.92e-10!59;UBERON:0007023!2.43e-08!115;UBERON:0004089!5.74e-08!2;UBERON:0000341!8.60e-08!2;UBERON:0000078!2.62e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.37e-44;2!UBERON:0001044;1.39e-33;6!UBERON:0003293;1.39e-33;6!UBERON:0003294;1.39e-33;6!UBERON:0010047;1.39e-33;6!UBERON:0003408;1.39e-33;6!UBERON:0000167;1.39e-33;6!UBERON:0001736;2.10e-23;1!UBERON:0001831;4.59e-23;1!UBERON:0001567;4.59e-23;1!UBERON:0001041;7.51e-15;14!UBERON:0004089;3.06e-12;2!UBERON:0000161;4.00e-11;19!UBERON:0000166;4.00e-11;19!UBERON:0000165;9.54e-08;28!UBERON:0002365;6.39e-07;31!UBERON:0002330;6.39e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.53e-44,2;UBERON:0001044,1.47e-33,6;UBERON:0003293,1.47e-33,6;UBERON:0003294,1.47e-33,6;UBERON:0010047,1.47e-33,6;UBERON:0000167,1.47e-33,6;UBERON:0001736,2.10e-23,1;UBERON:0006298,2.10e-23,1;UBERON:0001831,5.13e-23,1;UBERON:0001567,5.13e-23,1;UBERON:0008801,5.13e-23,1;UBERON:0003408,1.79e-20,10;UBERON:0004089,3.24e-12,2;UBERON:0000166,1.09e-09,22;UBERON:0000165,1.71e-07,29;UBERON:0000930,1.71e-07,29;UBERON:0002365,4.77e-07,31;UBERON:0002330,4.77e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.323547656195,12.3792827998596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02318302348389,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.318235791390825,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.323547656195,12.3792827998596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02318302348389,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.318235791390825,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CLCNKB | |short_description=p3@CLCNKB | ||
}} | }} |
Latest revision as of 08:49, 18 September 2015
Short description: | p3@CLCNKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLCNKB_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 36bp_to_ENST00000331579, ENST00000375679_5end |
EntrezGene: | CLCNKB |
HGNC: | 2027 |
UniProt: | E9PDY8P51801 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.53e-44 | 2 |
saliva-secreting gland | 1.47e-33 | 6 |
gland of oral region | 1.47e-33 | 6 |
gland of foregut | 1.47e-33 | 6 |
oral gland | 1.47e-33 | 6 |
oral cavity | 1.47e-33 | 6 |
submandibular gland | 2.10e-23 | 1 |
submandibular gland primordium | 2.10e-23 | 1 |
parotid gland | 5.13e-23 | 1 |
cheek | 5.13e-23 | 1 |
parotid gland primordium | 5.13e-23 | 1 |
gland of gut | 1.79e-20 | 10 |
midface | 3.24e-12 | 2 |
oral opening | 1.09e-09 | 22 |
mouth | 1.71e-07 | 29 |
stomodeum | 1.71e-07 | 29 |
exocrine gland | 4.77e-07 | 31 |
exocrine system | 4.77e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.61e-07 | 4 |